RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 H1FX-AS1Q4G0G2 97 aa10.96□□□□□ -0.65
SNRNP70-209ENST00000601065 COA5Q86WW8 74 aa10.96□□□□□ -0.65
SNRNP70-209ENST00000601065 FLGP20930 4061 aaPredicted RBP10.94□□□□□ -0.66
SNRNP70-209ENST00000601065 CHKB-CPT1BH3BT56 60 aa10.87□□□□□ -0.67
SNRNP70-209ENST00000601065 S4R3F8 94 aa10.82□□□□□ -0.68
SNRNP70-209ENST00000601065 MT1HP80294 61 aa10.8□□□□□ -0.68
SNRNP70-209ENST00000601065 LCA10Q71F78 164 aa10.79□□□□□ -0.68
SNRNP70-209ENST00000601065 KRTAP3-3Q9BYR6 98 aa10.72□□□□□ -0.69
SNRNP70-209ENST00000601065 SPTSSBQ8NFR3 76 aa10.67□□□□□ -0.7
SNRNP70-209ENST00000601065 Q1T7F1 81 aa10.66□□□□□ -0.7
SNRNP70-209ENST00000601065 M0R2T5 61 aa10.65□□□□□ -0.7
SNRNP70-209ENST00000601065 LCE2AQ5TA79 106 aaPredicted RBP10.65□□□□□ -0.7
SNRNP70-209ENST00000601065 V9GYY9 64 aa10.64□□□□□ -0.71
SNRNP70-209ENST00000601065 CSAG1Q6PB30 78 aa10.6□□□□□ -0.71
SNRNP70-209ENST00000601065 SVIPQ8NHG7 77 aa10.47□□□□□ -0.73
SNRNP70-209ENST00000601065 KRTAP10-6P60371 365 aaPredicted RBP10.46□□□□□ -0.74
SNRNP70-209ENST00000601065 LINC01558Q9Y6Z2 57 aa10.45□□□□□ -0.74
SNRNP70-209ENST00000601065 PSPHP1O15172 72 aa10.44□□□□□ -0.74
SNRNP70-209ENST00000601065 LORP23490 312 aaPredicted RBP10.42□□□□□ -0.74
SNRNP70-209ENST00000601065 PRR15LQ9BU68 103 aa10.38□□□□□ -0.75
SNRNP70-209ENST00000601065 A0A1B0GU69 56 aa10.37□□□□□ -0.75
SNRNP70-209ENST00000601065 SEC61GP60059 68 aa10.36□□□□□ -0.75
SNRNP70-209ENST00000601065 BRK1Q8WUW1 75 aa10.36□□□□□ -0.75
SNRNP70-209ENST00000601065 KRTAP9-8Q9BYQ0 159 aa10.36□□□□□ -0.75
SNRNP70-209ENST00000601065 PRO0628Q9UI54 55 aa10.35□□□□□ -0.75
SNRNP70-209ENST00000601065 Q5VV11 94 aa10.34□□□□□ -0.75
SNRNP70-209ENST00000601065 H0YAA0 97 aa10.33□□□□□ -0.76
SNRNP70-209ENST00000601065 ADM2Q7Z4H4 148 aa10.33□□□□□ -0.76
SNRNP70-209ENST00000601065 KRTAP3-2Q9BYR7 98 aa10.29□□□□□ -0.76
SNRNP70-209ENST00000601065 MT2AP02795 61 aa10.28□□□□□ -0.76
SNRNP70-209ENST00000601065 P0C880 135 aa10.24□□□□□ -0.77
SNRNP70-209ENST00000601065 MT1FP04733 61 aa10.22□□□□□ -0.77
SNRNP70-209ENST00000601065 KRTAP10-10P60014 251 aa10.18□□□□□ -0.78
SNRNP70-209ENST00000601065 A6NED7 52 aa10.16□□□□□ -0.78
SNRNP70-209ENST00000601065 A0A1B0GU33 70 aa10.11□□□□□ -0.79
SNRNP70-209ENST00000601065 CDC42SE1Q9NRR8 79 aa10.03□□□□□ -0.8
SNRNP70-209ENST00000601065 UQCR11O14957 56 aa10.01□□□□□ -0.81
SNRNP70-209ENST00000601065 CRIPTQ9P021 101 aa10.01□□□□□ -0.81
SNRNP70-209ENST00000601065 KRTAP9-3Q9BYQ3 159 aa10□□□□□ -0.81
SNRNP70-209ENST00000601065 KRTAP13-4Q3LI77 160 aa9.98□□□□□ -0.81
SNRNP70-209ENST00000601065 SPATA8Q6RVD6 105 aa9.98□□□□□ -0.81
SNRNP70-209ENST00000601065 R4GN34 69 aa9.97□□□□□ -0.81
SNRNP70-209ENST00000601065 M0QZ58 72 aa9.95□□□□□ -0.82
SNRNP70-209ENST00000601065 A8MU10 97 aa9.93□□□□□ -0.82
SNRNP70-209ENST00000601065 KRTAP19-1Q8IUB9 90 aa9.91□□□□□ -0.82
SNRNP70-209ENST00000601065 SPRR2GQ9BYE4 73 aa9.91□□□□□ -0.82
SNRNP70-209ENST00000601065 MIR22HGQ0VDD5 57 aa9.89□□□□□ -0.83
SNRNP70-209ENST00000601065 PMAIP1Q13794 54 aa9.8□□□□□ -0.84
SNRNP70-209ENST00000601065 LINC01554Q52M75 96 aa9.8□□□□□ -0.84
SNRNP70-209ENST00000601065 A0A0D9SG42 100 aa9.79□□□□□ -0.84
SNRNP70-209ENST00000601065 LCE2DQ5TA82 110 aaPredicted RBP9.79□□□□□ -0.84
SNRNP70-209ENST00000601065 LCE2BO14633 110 aa9.78□□□□□ -0.84
SNRNP70-209ENST00000601065 KRTAP19-8Q3LI54 63 aa9.69□□□□□ -0.86
SNRNP70-209ENST00000601065 A6NN06 94 aa9.66□□□□□ -0.86
SNRNP70-209ENST00000601065 USH2AO75445 5202 aa9.64□□□□□ -0.87
SNRNP70-209ENST00000601065 KRTAP9-2Q9BYQ4 174 aa9.61□□□□□ -0.87
SNRNP70-209ENST00000601065 MT1BP07438 61 aa9.6□□□□□ -0.87
SNRNP70-209ENST00000601065 KRTAP12-1P59990 96 aa9.58□□□□□ -0.88
SNRNP70-209ENST00000601065 SPINT4Q6UDR6 99 aa9.57□□□□□ -0.88
SNRNP70-209ENST00000601065 KRTAP12-2P59991 146 aa9.55□□□□□ -0.88
SNRNP70-209ENST00000601065 KTN1-AS1Q86SY8 53 aa9.53□□□□□ -0.88
SNRNP70-209ENST00000601065 FSIP2Q5CZC0 6907 aa9.51□□□□□ -0.89
SNRNP70-209ENST00000601065 PLAC4Q8WY50 150 aa9.47□□□□□ -0.89
SNRNP70-209ENST00000601065 K7ERS5 55 aa9.47□□□□□ -0.89
SNRNP70-209ENST00000601065 SSPOA2VEC9 5147 aa9.41□□□□□ -0.9
SNRNP70-209ENST00000601065 CAMK2N1Q7Z7J9 78 aa9.32□□□□□ -0.92
SNRNP70-209ENST00000601065 KRTAP19-6Q3LI70 58 aa9.27□□□□□ -0.93
SNRNP70-209ENST00000601065 MT1XP80297 61 aa9.21□□□□□ -0.94
SNRNP70-209ENST00000601065 CRCT1Q9UGL9 99 aa9.21□□□□□ -0.94
SNRNP70-209ENST00000601065 KRTAP10-5P60370 271 aa9.18□□□□□ -0.94
SNRNP70-209ENST00000601065 PRO2289Q9P1D8 64 aa9.14□□□□□ -0.95
SNRNP70-209ENST00000601065 PRAC1Q96KF2 57 aa9.11□□□□□ -0.95
SNRNP70-209ENST00000601065 C10orf95Q9H7T3 257 aa9.08□□□□□ -0.96
SNRNP70-209ENST00000601065 FCGBPQ9Y6R7 5405 aaPredicted RBP9.05□□□□□ -0.96
SNRNP70-209ENST00000601065 ROMO1P60602 79 aa9.04□□□□□ -0.96
SNRNP70-209ENST00000601065 KRTAP9-6A0A140TA67 174 aa8.99□□□□□ -0.97
SNRNP70-209ENST00000601065 TNP1P09430 55 aa8.82□□□□□ -1
SNRNP70-209ENST00000601065 KRTAP10-7P60409 375 aaPredicted RBP8.82□□□□□ -1
SNRNP70-209ENST00000601065 KRTAP25-1Q3LHN0 102 aa8.81□□□□□ -1
SNRNP70-209ENST00000601065 KRTAP10-12P60413 245 aa8.74□□□□□ -1.01
SNRNP70-209ENST00000601065 KMT2DO14686 5537 aa8.66□□□□□ -1.02
SNRNP70-209ENST00000601065 MACF1Q9UPN3 7388 aaKnown RBP8.66□□□□□ -1.02
SNRNP70-209ENST00000601065 KRTAP4-8A0A0G2JLE6 195 aa8.57□□□□□ -1.04
SNRNP70-209ENST00000601065 KRTAP4-8Q9BYQ9 185 aa8.57□□□□□ -1.04
SNRNP70-209ENST00000601065 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.54□□□□□ -1.04
SNRNP70-209ENST00000601065 LCE3AQ5TA76 89 aa8.5□□□□□ -1.05
SNRNP70-209ENST00000601065 SYNE2Q8WXH0 6885 aaKnown RBP8.47□□□□□ -1.05
SNRNP70-209ENST00000601065 KRTAP23-1A1A580 65 aa8.45□□□□□ -1.06
SNRNP70-209ENST00000601065 PP632Q6XCG6 107 aa8.43□□□□□ -1.06
SNRNP70-209ENST00000601065 KRTAP8-1Q8IUC2 63 aa8.42□□□□□ -1.06
SNRNP70-209ENST00000601065 KRTAP6-3Q3LI67 103 aa8.24□□□□□ -1.09
SNRNP70-209ENST00000601065 KRTAP5-9P26371 169 aa8.23□□□□□ -1.09
SNRNP70-209ENST00000601065 KRTAP19-5Q3LI72 72 aa8.22□□□□□ -1.09
SNRNP70-209ENST00000601065 KRTAP19-7Q3SYF9 63 aa8.22□□□□□ -1.09
SNRNP70-209ENST00000601065 SPRR2FQ96RM1 72 aa8.2□□□□□ -1.1
SNRNP70-209ENST00000601065 KRTAP9-7A8MTY7 169 aa8.18□□□□□ -1.1
SNRNP70-209ENST00000601065 KRTAP12-3P60328 96 aa8.15□□□□□ -1.1
SNRNP70-209ENST00000601065 MUC12Q9UKN1 5478 aa8.11□□□□□ -1.11
SNRNP70-209ENST00000601065 MT1EP04732 61 aa8.1□□□□□ -1.11
SNRNP70-209ENST00000601065 MDN1Q9NU22 5596 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms