RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	ATOX1	O00244	68 aa		7.04	□□□□□ -1.28
PLD3-223	ENST00000600948	SPRR2G	Q9BYE4	73 aa		6.98	□□□□□ -1.29
PLD3-223	ENST00000600948	OCR1	Q9BZK8	76 aa		6.97	□□□□□ -1.29
PLD3-223	ENST00000600948	SCGB1A1	P11684	91 aa		6.96	□□□□□ -1.3
PLD3-223	ENST00000600948	KLKP1	Q107X0	134 aa		6.96	□□□□□ -1.3
PLD3-223	ENST00000600948	MT1B	P07438	61 aa		6.95	□□□□□ -1.3
PLD3-223	ENST00000600948	LINC00208	Q96KT6	92 aa		6.95	□□□□□ -1.3
PLD3-223	ENST00000600948	KRTAP19-8	Q3LI54	63 aa		6.94	□□□□□ -1.3
PLD3-223	ENST00000600948		Q5VV11	94 aa		6.91	□□□□□ -1.3
PLD3-223	ENST00000600948		A8MUN3	132 aa		6.9	□□□□□ -1.3
PLD3-223	ENST00000600948	MP68	P56378	58 aa		6.9	□□□□□ -1.3
PLD3-223	ENST00000600948	NDUFC1	O43677	76 aa		6.89	□□□□□ -1.31
PLD3-223	ENST00000600948	IMUP	Q9GZP8	106 aa		6.88	□□□□□ -1.31
PLD3-223	ENST00000600948	MT-ATP8	P03928	68 aa		6.87	□□□□□ -1.31
PLD3-223	ENST00000600948	PCP4	P48539	62 aa		6.87	□□□□□ -1.31
PLD3-223	ENST00000600948		H0YAA0	97 aa		6.86	□□□□□ -1.31
PLD3-223	ENST00000600948	CRIPT	Q9P021	101 aa		6.85	□□□□□ -1.31
PLD3-223	ENST00000600948	MACF1	Q9UPN3	7388 aa	Known RBP	6.85	□□□□□ -1.31
PLD3-223	ENST00000600948		A6NN06	94 aa		6.82	□□□□□ -1.32
PLD3-223	ENST00000600948		H3BPC8	53 aa		6.82	□□□□□ -1.32
PLD3-223	ENST00000600948	KRTAP10-5	P60370	271 aa		6.77	□□□□□ -1.33
PLD3-223	ENST00000600948	KRTAP6-3	Q3LI67	103 aa		6.76	□□□□□ -1.33
PLD3-223	ENST00000600948	ADM2	Q7Z4H4	148 aa		6.76	□□□□□ -1.33
PLD3-223	ENST00000600948	SYNE2	Q8WXH0	6885 aa	Known RBP	6.75	□□□□□ -1.33
PLD3-223	ENST00000600948	DMAC1	Q96GE9	116 aa		6.74	□□□□□ -1.33
PLD3-223	ENST00000600948	ANAPC13	Q9BS18	74 aa		6.66	□□□□□ -1.34
PLD3-223	ENST00000600948		P0C880	135 aa		6.64	□□□□□ -1.35
PLD3-223	ENST00000600948	TRAV7	A0A075B6U4	112 aa		6.63	□□□□□ -1.35
PLD3-223	ENST00000600948	SMIM20	Q8N5G0	67 aa		6.62	□□□□□ -1.35
PLD3-223	ENST00000600948	C20orf197	Q8N268	126 aa		6.59	□□□□□ -1.35
PLD3-223	ENST00000600948		R4GN34	69 aa		6.58	□□□□□ -1.36
PLD3-223	ENST00000600948	ACYP2	P14621	99 aa		6.56	□□□□□ -1.36
PLD3-223	ENST00000600948		M0QZ58	72 aa		6.54	□□□□□ -1.36
PLD3-223	ENST00000600948	COX7C	P15954	63 aa		6.53	□□□□□ -1.36
PLD3-223	ENST00000600948	MT1X	P80297	61 aa		6.52	□□□□□ -1.37
PLD3-223	ENST00000600948	SERP2	Q8N6R1	65 aa		6.52	□□□□□ -1.37
PLD3-223	ENST00000600948	PLAC4	Q8WY50	150 aa		6.51	□□□□□ -1.37
PLD3-223	ENST00000600948	CCDC179	H3BU77	68 aa		6.5	□□□□□ -1.37
PLD3-223	ENST00000600948	PRO2289	Q9P1D8	64 aa		6.5	□□□□□ -1.37
PLD3-223	ENST00000600948	SNURF	Q9Y675	71 aa		6.49	□□□□□ -1.37
PLD3-223	ENST00000600948	KRTAP5-9	P26371	169 aa		6.48	□□□□□ -1.37
PLD3-223	ENST00000600948	SPTSSB	Q8NFR3	76 aa		6.46	□□□□□ -1.38
PLD3-223	ENST00000600948	MUC12	Q9UKN1	5478 aa		6.43	□□□□□ -1.38
PLD3-223	ENST00000600948	LINC01554	Q52M75	96 aa		6.43	□□□□□ -1.38
PLD3-223	ENST00000600948	CHKB-CPT1B	H3BT56	60 aa		6.42	□□□□□ -1.38
PLD3-223	ENST00000600948	SPANXA2-OT1	Q8N9U9	137 aa		6.41	□□□□□ -1.38
PLD3-223	ENST00000600948	KMT2D	O14686	5537 aa		6.38	□□□□□ -1.39
PLD3-223	ENST00000600948	NEB	P20929	6669 aa		6.37	□□□□□ -1.39
PLD3-223	ENST00000600948	KRTAP12-2	P59991	146 aa		6.35	□□□□□ -1.39
PLD3-223	ENST00000600948	TMEM258	P61165	79 aa		6.32	□□□□□ -1.4
PLD3-223	ENST00000600948	MDN1	Q9NU22	5596 aa		6.3	□□□□□ -1.4
PLD3-223	ENST00000600948	CYSTM1	Q9H1C7	97 aa		6.29	□□□□□ -1.4
PLD3-223	ENST00000600948	SPRR2F	Q96RM1	72 aa		6.28	□□□□□ -1.4
PLD3-223	ENST00000600948	KRTAP8-1	Q8IUC2	63 aa		6.27	□□□□□ -1.41
PLD3-223	ENST00000600948		H7BZZ5	65 aa		6.26	□□□□□ -1.41
PLD3-223	ENST00000600948	KRTAP20-1	Q3LI63	56 aa		6.24	□□□□□ -1.41
PLD3-223	ENST00000600948	ATP5E	P56381	51 aa	Predicted RBP	6.23	□□□□□ -1.41
PLD3-223	ENST00000600948	COA5	Q86WW8	74 aa		6.23	□□□□□ -1.41
PLD3-223	ENST00000600948	KRTAP10-7	P60409	375 aa	Predicted RBP	6.22	□□□□□ -1.41
PLD3-223	ENST00000600948	RPS28	P62857	69 aa	Known RBP	6.22	□□□□□ -1.41
PLD3-223	ENST00000600948	KRTAP13-4	Q3LI77	160 aa		6.22	□□□□□ -1.41
PLD3-223	ENST00000600948	KRTAP4-8	A0A0G2JLE6	195 aa		6.21	□□□□□ -1.42
PLD3-223	ENST00000600948	KRTAP4-8	Q9BYQ9	185 aa		6.21	□□□□□ -1.42
PLD3-223	ENST00000600948	KRTAP10-12	P60413	245 aa		6.19	□□□□□ -1.42
PLD3-223	ENST00000600948	SPRR2E	P22531	72 aa		6.18	□□□□□ -1.42
PLD3-223	ENST00000600948	SPRR2B	P35325	72 aa		6.18	□□□□□ -1.42
PLD3-223	ENST00000600948	SPRR2A	P35326	72 aa		6.18	□□□□□ -1.42
PLD3-223	ENST00000600948	LCE1A	Q5T7P2	110 aa		6.12	□□□□□ -1.43
PLD3-223	ENST00000600948	SERP1	Q9Y6X1	66 aa		6.12	□□□□□ -1.43
PLD3-223	ENST00000600948	KRTAP2-3	P0C7H8	128 aa		6.09	□□□□□ -1.43
PLD3-223	ENST00000600948	KRTAP2-4	Q9BYR9	128 aa		6.09	□□□□□ -1.43
PLD3-223	ENST00000600948	SEC61G	P60059	68 aa		6.07	□□□□□ -1.44
PLD3-223	ENST00000600948	CAMK2N1	Q7Z7J9	78 aa		6.05	□□□□□ -1.44
PLD3-223	ENST00000600948		A0A0D9SG42	100 aa		6	□□□□□ -1.45
PLD3-223	ENST00000600948		A0A1B0GU33	70 aa		6	□□□□□ -1.45
PLD3-223	ENST00000600948	SPATA8	Q6RVD6	105 aa		6	□□□□□ -1.45
PLD3-223	ENST00000600948	SMIM26	A0A096LP01	95 aa		5.98	□□□□□ -1.45
PLD3-223	ENST00000600948	SPRR2D	P22532	72 aa		5.97	□□□□□ -1.45
PLD3-223	ENST00000600948	KRTAP12-1	P59990	96 aa		5.91	□□□□□ -1.46
PLD3-223	ENST00000600948	SPINT4	Q6UDR6	99 aa		5.91	□□□□□ -1.46
PLD3-223	ENST00000600948	KRTAP2-2	Q9BYT5	123 aa		5.9	□□□□□ -1.46
PLD3-223	ENST00000600948	KRTAP2-1	Q9BYU5	128 aa		5.9	□□□□□ -1.46
PLD3-223	ENST00000600948		A0A1B0GU69	56 aa		5.89	□□□□□ -1.47
PLD3-223	ENST00000600948		Q1T7F1	81 aa		5.84	□□□□□ -1.47
PLD3-223	ENST00000600948	KRTAP19-7	Q3SYF9	63 aa		5.83	□□□□□ -1.48
PLD3-223	ENST00000600948		V9GYY9	64 aa		5.83	□□□□□ -1.48
PLD3-223	ENST00000600948	LCE3B	Q5TA77	95 aa		5.81	□□□□□ -1.48
PLD3-223	ENST00000600948		A8MU10	97 aa		5.79	□□□□□ -1.48
PLD3-223	ENST00000600948	MT1E	P04732	61 aa		5.77	□□□□□ -1.49
PLD3-223	ENST00000600948	LCE5A	Q5TCM9	118 aa		5.73	□□□□□ -1.49
PLD3-223	ENST00000600948	KRTAP19-3	Q7Z4W3	81 aa		5.71	□□□□□ -1.5
PLD3-223	ENST00000600948	PRR15L	Q9BU68	103 aa		5.71	□□□□□ -1.5
PLD3-223	ENST00000600948	LINC01558	Q9Y6Z2	57 aa		5.71	□□□□□ -1.5
PLD3-223	ENST00000600948		H3BS24	57 aa		5.69	□□□□□ -1.5
PLD3-223	ENST00000600948	KRTAP19-5	Q3LI72	72 aa		5.68	□□□□□ -1.5
PLD3-223	ENST00000600948	C10orf95	Q9H7T3	257 aa		5.65	□□□□□ -1.5
PLD3-223	ENST00000600948	PSPHP1	O15172	72 aa		5.62	□□□□□ -1.51
PLD3-223	ENST00000600948	TNP1	P09430	55 aa		5.59	□□□□□ -1.51
PLD3-223	ENST00000600948	MT1G	P13640	62 aa		5.57	□□□□□ -1.52
PLD3-223	ENST00000600948	LCE3A	Q5TA76	89 aa		5.57	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms