RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 A8MUN3 132 aa6.14□□□□□ -1.43
CHMP2A-206ENST00000600118 KRTAP10-6P60371 365 aaPredicted RBP6.14□□□□□ -1.43
CHMP2A-206ENST00000600118 ANAPC13Q9BS18 74 aa6.14□□□□□ -1.43
CHMP2A-206ENST00000600118 DMAC1Q96GE9 116 aa6.11□□□□□ -1.43
CHMP2A-206ENST00000600118 S4R3F8 94 aa6.1□□□□□ -1.43
CHMP2A-206ENST00000600118 LCA10Q71F78 164 aa6.08□□□□□ -1.44
CHMP2A-206ENST00000600118 SPANXA2-OT1Q8N9U9 137 aa6.07□□□□□ -1.44
CHMP2A-206ENST00000600118 CYSTM1Q9H1C7 97 aa6.06□□□□□ -1.44
CHMP2A-206ENST00000600118 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
CHMP2A-206ENST00000600118 NDUFC1O43677 76 aa6.04□□□□□ -1.44
CHMP2A-206ENST00000600118 CCDC179H3BU77 68 aa6.03□□□□□ -1.44
CHMP2A-206ENST00000600118 H7BZZ5 65 aa6.03□□□□□ -1.44
CHMP2A-206ENST00000600118 KRTAP4-12Q9BQ66 201 aa6.03□□□□□ -1.44
CHMP2A-206ENST00000600118 CSAG1Q6PB30 78 aa6.01□□□□□ -1.45
CHMP2A-206ENST00000600118 MT2AP02795 61 aa6□□□□□ -1.45
CHMP2A-206ENST00000600118 ACYP2P14621 99 aa5.99□□□□□ -1.45
CHMP2A-206ENST00000600118 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
CHMP2A-206ENST00000600118 MT1FP04733 61 aa5.95□□□□□ -1.46
CHMP2A-206ENST00000600118 KRTAP9-9Q9BYP9 154 aa5.91□□□□□ -1.46
CHMP2A-206ENST00000600118 KRTAP9-4Q9BYQ2 154 aa5.91□□□□□ -1.46
CHMP2A-206ENST00000600118 KRTAP10-10P60014 251 aa5.9□□□□□ -1.46
CHMP2A-206ENST00000600118 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.46
CHMP2A-206ENST00000600118 H0YAA0 97 aa5.88□□□□□ -1.47
CHMP2A-206ENST00000600118 CHKB-CPT1BH3BT56 60 aa5.86□□□□□ -1.47
CHMP2A-206ENST00000600118 COA5Q86WW8 74 aa5.86□□□□□ -1.47
CHMP2A-206ENST00000600118 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
CHMP2A-206ENST00000600118 ATP5EP56381 51 aaPredicted RBP5.83□□□□□ -1.48
CHMP2A-206ENST00000600118 SPTSSBQ8NFR3 76 aa5.83□□□□□ -1.48
CHMP2A-206ENST00000600118 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
CHMP2A-206ENST00000600118 TMEM258P61165 79 aa5.82□□□□□ -1.48
CHMP2A-206ENST00000600118 ADM2Q7Z4H4 148 aa5.79□□□□□ -1.48
CHMP2A-206ENST00000600118 PCP4P48539 62 aa5.77□□□□□ -1.49
CHMP2A-206ENST00000600118 CRIPTQ9P021 101 aa5.73□□□□□ -1.49
CHMP2A-206ENST00000600118 USH2AO75445 5202 aa5.73□□□□□ -1.49
CHMP2A-206ENST00000600118 P0C880 135 aa5.72□□□□□ -1.49
CHMP2A-206ENST00000600118 SPRR2GQ9BYE4 73 aa5.71□□□□□ -1.5
CHMP2A-206ENST00000600118 SERP1Q9Y6X1 66 aa5.64□□□□□ -1.51
CHMP2A-206ENST00000600118 FSIP2Q5CZC0 6907 aa5.62□□□□□ -1.51
CHMP2A-206ENST00000600118 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
CHMP2A-206ENST00000600118 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
CHMP2A-206ENST00000600118 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
CHMP2A-206ENST00000600118 SSPOA2VEC9 5147 aa5.59□□□□□ -1.51
CHMP2A-206ENST00000600118 R4GN34 69 aa5.59□□□□□ -1.51
CHMP2A-206ENST00000600118 MT1BP07438 61 aa5.58□□□□□ -1.52
CHMP2A-206ENST00000600118 SEC61GP60059 68 aa5.58□□□□□ -1.52
CHMP2A-206ENST00000600118 M0QZ58 72 aa5.57□□□□□ -1.52
CHMP2A-206ENST00000600118 CRCT1Q9UGL9 99 aa5.56□□□□□ -1.52
CHMP2A-206ENST00000600118 Q5VV11 94 aa5.54□□□□□ -1.52
CHMP2A-206ENST00000600118 A0A1B0GU69 56 aa5.53□□□□□ -1.52
CHMP2A-206ENST00000600118 LINC01558Q9Y6Z2 57 aa5.53□□□□□ -1.52
CHMP2A-206ENST00000600118 KRTAP13-4Q3LI77 160 aa5.51□□□□□ -1.53
CHMP2A-206ENST00000600118 A0A1B0GU33 70 aa5.49□□□□□ -1.53
CHMP2A-206ENST00000600118 RPS28P62857 69 aaKnown RBP5.49□□□□□ -1.53
CHMP2A-206ENST00000600118 KRTAP19-6Q3LI70 58 aa5.48□□□□□ -1.53
CHMP2A-206ENST00000600118 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
CHMP2A-206ENST00000600118 LINC01554Q52M75 96 aa5.45□□□□□ -1.54
CHMP2A-206ENST00000600118 PRR15LQ9BU68 103 aa5.45□□□□□ -1.54
CHMP2A-206ENST00000600118 SMIM26A0A096LP01 95 aa5.44□□□□□ -1.54
CHMP2A-206ENST00000600118 Q1T7F1 81 aa5.42□□□□□ -1.54
CHMP2A-206ENST00000600118 A6NN06 94 aa5.41□□□□□ -1.54
CHMP2A-206ENST00000600118 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
CHMP2A-206ENST00000600118 V9GYY9 64 aa5.41□□□□□ -1.54
CHMP2A-206ENST00000600118 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
CHMP2A-206ENST00000600118 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.54
CHMP2A-206ENST00000600118 PLAC4Q8WY50 150 aa5.39□□□□□ -1.55
CHMP2A-206ENST00000600118 LCE4AQ5TA78 99 aa5.37□□□□□ -1.55
CHMP2A-206ENST00000600118 KRTAP10-5P60370 271 aa5.36□□□□□ -1.55
CHMP2A-206ENST00000600118 A0A0D9SG42 100 aa5.33□□□□□ -1.56
CHMP2A-206ENST00000600118 PSPHP1O15172 72 aa5.32□□□□□ -1.56
CHMP2A-206ENST00000600118 MT1XP80297 61 aa5.31□□□□□ -1.56
CHMP2A-206ENST00000600118 UQCR11O14957 56 aa5.3□□□□□ -1.56
CHMP2A-206ENST00000600118 A8MU10 97 aa5.29□□□□□ -1.56
CHMP2A-206ENST00000600118 KRTAP12-1P59990 96 aa5.28□□□□□ -1.56
CHMP2A-206ENST00000600118 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
CHMP2A-206ENST00000600118 PRO2289Q9P1D8 64 aa5.26□□□□□ -1.57
CHMP2A-206ENST00000600118 KRTAP12-2P59991 146 aa5.23□□□□□ -1.57
CHMP2A-206ENST00000600118 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
CHMP2A-206ENST00000600118 SPINT4Q6UDR6 99 aa5.22□□□□□ -1.57
CHMP2A-206ENST00000600118 KRTAP9-7A8MTY7 169 aa5.2□□□□□ -1.58
CHMP2A-206ENST00000600118 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
CHMP2A-206ENST00000600118 A6NED7 52 aa5.15□□□□□ -1.59
CHMP2A-206ENST00000600118 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
CHMP2A-206ENST00000600118 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
CHMP2A-206ENST00000600118 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
CHMP2A-206ENST00000600118 KRTAP10-12P60413 245 aa5.04□□□□□ -1.6
CHMP2A-206ENST00000600118 CDC42SE1Q9NRR8 79 aa5.03□□□□□ -1.6
CHMP2A-206ENST00000600118 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
CHMP2A-206ENST00000600118 K7ERS5 55 aa5.02□□□□□ -1.61
CHMP2A-206ENST00000600118 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
CHMP2A-206ENST00000600118 C10orf95Q9H7T3 257 aa5.01□□□□□ -1.61
CHMP2A-206ENST00000600118 KMT2DO14686 5537 aa4.98□□□□□ -1.61
CHMP2A-206ENST00000600118 KRTAP6-3Q3LI67 103 aa4.96□□□□□ -1.62
CHMP2A-206ENST00000600118 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.63
CHMP2A-206ENST00000600118 TNP1P09430 55 aa4.89□□□□□ -1.63
CHMP2A-206ENST00000600118 KRTAP5-9P26371 169 aa4.89□□□□□ -1.63
CHMP2A-206ENST00000600118 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
CHMP2A-206ENST00000600118 BRK1Q8WUW1 75 aa4.83□□□□□ -1.64
CHMP2A-206ENST00000600118 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
CHMP2A-206ENST00000600118 MUC12Q9UKN1 5478 aa4.79□□□□□ -1.64
CHMP2A-206ENST00000600118 ROMO1P60602 79 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms