RNA–Protein interactions for RNA: ENST00000599953.1

ZNF544-215, Transcript of zinc finger protein 544, humanhuman

TSL 5 BASIC

Gene ZNF544, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-215ENST00000599953 LINC01554Q52M75 96 aa5.54□□□□□ -1.52
ZNF544-215ENST00000599953 S4R3F8 94 aa5.54□□□□□ -1.52
ZNF544-215ENST00000599953 CSAG1Q6PB30 78 aa5.52□□□□□ -1.53
ZNF544-215ENST00000599953 KRTAP3-3Q9BYR6 98 aa5.51□□□□□ -1.53
ZNF544-215ENST00000599953 LRP1Q07954 4544 aaKnown RBP5.5□□□□□ -1.53
ZNF544-215ENST00000599953 HSPG2P98160 4391 aa5.5□□□□□ -1.53
ZNF544-215ENST00000599953 DMBT1Q9UGM3 2413 aaPredicted RBP5.5□□□□□ -1.53
ZNF544-215ENST00000599953 MT1HL1P0DM35 61 aa5.49□□□□□ -1.53
ZNF544-215ENST00000599953 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
ZNF544-215ENST00000599953 TPRXLQ17RH7 258 aa5.44□□□□□ -1.54
ZNF544-215ENST00000599953 KRTAP17-1Q9BYP8 105 aa5.43□□□□□ -1.54
ZNF544-215ENST00000599953 KRTAP3-2Q9BYR7 98 aa5.43□□□□□ -1.54
ZNF544-215ENST00000599953 H3BS24 57 aa5.41□□□□□ -1.54
ZNF544-215ENST00000599953 RYR1P21817 5038 aa5.41□□□□□ -1.54
ZNF544-215ENST00000599953 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
ZNF544-215ENST00000599953 KRTAP13-4Q3LI77 160 aa5.38□□□□□ -1.55
ZNF544-215ENST00000599953 ROMO1P60602 79 aa5.37□□□□□ -1.55
ZNF544-215ENST00000599953 A0A0D9SG42 100 aa5.37□□□□□ -1.55
ZNF544-215ENST00000599953 EPPK1P58107 5090 aaKnown RBP5.37□□□□□ -1.55
ZNF544-215ENST00000599953 P0C880 135 aa5.36□□□□□ -1.55
ZNF544-215ENST00000599953 MYCBP2O75592 4640 aa5.33□□□□□ -1.56
ZNF544-215ENST00000599953 KIAA1109Q2LD37 5005 aa5.3□□□□□ -1.56
ZNF544-215ENST00000599953 M0QZ58 72 aa5.28□□□□□ -1.56
ZNF544-215ENST00000599953 SEC61BP60468 96 aaKnown RBP5.26□□□□□ -1.57
ZNF544-215ENST00000599953 CRIPTQ9P021 101 aa5.25□□□□□ -1.57
ZNF544-215ENST00000599953 KRTAP12-2P59991 146 aa5.23□□□□□ -1.57
ZNF544-215ENST00000599953 SPINT4Q6UDR6 99 aa5.22□□□□□ -1.57
ZNF544-215ENST00000599953 KRTAP12-1P59990 96 aa5.21□□□□□ -1.58
ZNF544-215ENST00000599953 KRTAP4-5Q9BYR2 181 aa5.2□□□□□ -1.58
ZNF544-215ENST00000599953 LRP2P98164 4655 aa5.19□□□□□ -1.58
ZNF544-215ENST00000599953 LPAP08519 4548 aa5.17□□□□□ -1.58
ZNF544-215ENST00000599953 J3QL48 77 aa5.17□□□□□ -1.58
ZNF544-215ENST00000599953 R4GN34 69 aa5.14□□□□□ -1.59
ZNF544-215ENST00000599953 BIRC6Q9NR09 4857 aa5.12□□□□□ -1.59
ZNF544-215ENST00000599953 C10orf95Q9H7T3 257 aa5.09□□□□□ -1.59
ZNF544-215ENST00000599953 ABCA13Q86UQ4 5058 aa5.06□□□□□ -1.6
ZNF544-215ENST00000599953 KRTAP4-1Q9BYQ7 146 aa5.06□□□□□ -1.6
ZNF544-215ENST00000599953 HERC2O95714 4834 aa5.05□□□□□ -1.6
ZNF544-215ENST00000599953 MUC17Q685J3 4493 aa5.01□□□□□ -1.61
ZNF544-215ENST00000599953 KRTAP19-2Q3LHN2 52 aa4.98□□□□□ -1.61
ZNF544-215ENST00000599953 LORP23490 312 aaPredicted RBP4.97□□□□□ -1.61
ZNF544-215ENST00000599953 LCE2DQ5TA82 110 aaPredicted RBP4.97□□□□□ -1.61
ZNF544-215ENST00000599953 PCLOQ9Y6V0 5065 aa4.94□□□□□ -1.62
ZNF544-215ENST00000599953 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
ZNF544-215ENST00000599953 CAMK2N1Q7Z7J9 78 aa4.88□□□□□ -1.63
ZNF544-215ENST00000599953 NDUFAF8A1L188 74 aa4.85□□□□□ -1.63
ZNF544-215ENST00000599953 PP632Q6XCG6 107 aa4.83□□□□□ -1.64
ZNF544-215ENST00000599953 HERC1Q15751 4861 aa4.83□□□□□ -1.64
ZNF544-215ENST00000599953 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
ZNF544-215ENST00000599953 PLAC4Q8WY50 150 aa4.74□□□□□ -1.65
ZNF544-215ENST00000599953 TNP1P09430 55 aa4.71□□□□□ -1.66
ZNF544-215ENST00000599953 HMCN2Q8NDA2 5059 aa4.7□□□□□ -1.66
ZNF544-215ENST00000599953 LCE2CQ5TA81 110 aa4.69□□□□□ -1.66
ZNF544-215ENST00000599953 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
ZNF544-215ENST00000599953 MUC2Q02817 5179 aa4.67□□□□□ -1.66
ZNF544-215ENST00000599953 M0R2T5 61 aa4.66□□□□□ -1.66
ZNF544-215ENST00000599953 SPRR2GQ9BYE4 73 aa4.66□□□□□ -1.66
ZNF544-215ENST00000599953 MT1HP80294 61 aa4.6□□□□□ -1.67
ZNF544-215ENST00000599953 KRTAP19-1Q8IUB9 90 aa4.58□□□□□ -1.68
ZNF544-215ENST00000599953 LUZP6Q538Z0 58 aa4.57□□□□□ -1.68
ZNF544-215ENST00000599953 UBR4Q5T4S7 5183 aa4.55□□□□□ -1.68
ZNF544-215ENST00000599953 KRTAP10-10P60014 251 aa4.53□□□□□ -1.68
ZNF544-215ENST00000599953 MT2AP02795 61 aa4.52□□□□□ -1.69
ZNF544-215ENST00000599953 RNF213Q63HN8 5207 aa4.51□□□□□ -1.69
ZNF544-215ENST00000599953 MT1FP04733 61 aa4.5□□□□□ -1.69
ZNF544-215ENST00000599953 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
ZNF544-215ENST00000599953 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
ZNF544-215ENST00000599953 FAT4Q6V0I7 4981 aa4.46□□□□□ -1.7
ZNF544-215ENST00000599953 KRTAP19-8Q3LI54 63 aa4.45□□□□□ -1.7
ZNF544-215ENST00000599953 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
ZNF544-215ENST00000599953 LCE3AQ5TA76 89 aa4.39□□□□□ -1.71
ZNF544-215ENST00000599953 MT1BP07438 61 aa4.35□□□□□ -1.71
ZNF544-215ENST00000599953 LCE2BO14633 110 aa4.33□□□□□ -1.72
ZNF544-215ENST00000599953 KRTAP10-5P60370 271 aa4.33□□□□□ -1.72
ZNF544-215ENST00000599953 MT1XP80297 61 aa4.32□□□□□ -1.72
ZNF544-215ENST00000599953 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
ZNF544-215ENST00000599953 KRTAP9-3Q9BYQ3 159 aa4.29□□□□□ -1.72
ZNF544-215ENST00000599953 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
ZNF544-215ENST00000599953 PRO2289Q9P1D8 64 aa4.27□□□□□ -1.73
ZNF544-215ENST00000599953 LCE2AQ5TA79 106 aaPredicted RBP4.24□□□□□ -1.73
ZNF544-215ENST00000599953 KRTAP12-3P60328 96 aa4.21□□□□□ -1.73
ZNF544-215ENST00000599953 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
ZNF544-215ENST00000599953 LOC100996750A0A140TA64 210 aa4.05□□□□□ -1.76
ZNF544-215ENST00000599953 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
ZNF544-215ENST00000599953 KRTAP19-5Q3LI72 72 aa4.02□□□□□ -1.77
ZNF544-215ENST00000599953 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
ZNF544-215ENST00000599953 INE1O15225 51 aa3.92□□□□□ -1.78
ZNF544-215ENST00000599953 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.79
ZNF544-215ENST00000599953 KRTAP4-8Q9BYQ9 185 aa3.9□□□□□ -1.79
ZNF544-215ENST00000599953 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
ZNF544-215ENST00000599953 USH2AO75445 5202 aa3.84□□□□□ -1.79
ZNF544-215ENST00000599953 KRTAP19-7Q3SYF9 63 aa3.84□□□□□ -1.79
ZNF544-215ENST00000599953 FSIP2Q5CZC0 6907 aa3.78□□□□□ -1.81
ZNF544-215ENST00000599953 KMT2DO14686 5537 aa3.76□□□□□ -1.81
ZNF544-215ENST00000599953 MT1EP04732 61 aa3.75□□□□□ -1.81
ZNF544-215ENST00000599953 MT1LQ93083 61 aa3.75□□□□□ -1.81
ZNF544-215ENST00000599953 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
ZNF544-215ENST00000599953 KRTAP19-6Q3LI70 58 aa3.74□□□□□ -1.81
ZNF544-215ENST00000599953 KRTAP4-7Q9BYR0 210 aa3.7□□□□□ -1.82
ZNF544-215ENST00000599953 SSPOA2VEC9 5147 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms