RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 MT1FP04733 61 aa7.15□□□□□ -1.26
GTF2F1-206ENST00000598607 NDUFC1O43677 76 aa7.11□□□□□ -1.27
GTF2F1-206ENST00000598607 C20orf197Q8N268 126 aa7.11□□□□□ -1.27
GTF2F1-206ENST00000598607 DMAC1Q96GE9 116 aa7.11□□□□□ -1.27
GTF2F1-206ENST00000598607 SNURFQ9Y675 71 aa7.11□□□□□ -1.27
GTF2F1-206ENST00000598607 COX7CP15954 63 aa7.06□□□□□ -1.28
GTF2F1-206ENST00000598607 KRTAP9-3Q9BYQ3 159 aa7.04□□□□□ -1.28
GTF2F1-206ENST00000598607 ACYP2P14621 99 aa7.03□□□□□ -1.28
GTF2F1-206ENST00000598607 SPANXA2-OT1Q8N9U9 137 aa7.01□□□□□ -1.29
GTF2F1-206ENST00000598607 ANAPC13Q9BS18 74 aa6.98□□□□□ -1.29
GTF2F1-206ENST00000598607 H0YAA0 97 aa6.95□□□□□ -1.3
GTF2F1-206ENST00000598607 LCE2BO14633 110 aa6.92□□□□□ -1.3
GTF2F1-206ENST00000598607 CRCT1Q9UGL9 99 aa6.92□□□□□ -1.3
GTF2F1-206ENST00000598607 KRTAP9-6A0A140TA67 174 aa6.91□□□□□ -1.3
GTF2F1-206ENST00000598607 CHKB-CPT1BH3BT56 60 aa6.91□□□□□ -1.3
GTF2F1-206ENST00000598607 SPTSSBQ8NFR3 76 aa6.91□□□□□ -1.3
GTF2F1-206ENST00000598607 CRIPTQ9P021 101 aa6.87□□□□□ -1.31
GTF2F1-206ENST00000598607 H7BZZ5 65 aa6.86□□□□□ -1.31
GTF2F1-206ENST00000598607 ADM2Q7Z4H4 148 aa6.86□□□□□ -1.31
GTF2F1-206ENST00000598607 CYSTM1Q9H1C7 97 aa6.83□□□□□ -1.32
GTF2F1-206ENST00000598607 KRTAP19-1Q8IUB9 90 aa6.82□□□□□ -1.32
GTF2F1-206ENST00000598607 SPRR2GQ9BYE4 73 aa6.82□□□□□ -1.32
GTF2F1-206ENST00000598607 CCDC179H3BU77 68 aa6.79□□□□□ -1.32
GTF2F1-206ENST00000598607 FSIP2Q5CZC0 6907 aa6.78□□□□□ -1.32
GTF2F1-206ENST00000598607 COA5Q86WW8 74 aa6.78□□□□□ -1.32
GTF2F1-206ENST00000598607 USH2AO75445 5202 aa6.77□□□□□ -1.33
GTF2F1-206ENST00000598607 P0C880 135 aa6.72□□□□□ -1.33
GTF2F1-206ENST00000598607 KRTAP19-8Q3LI54 63 aa6.72□□□□□ -1.33
GTF2F1-206ENST00000598607 Q5VV11 94 aa6.72□□□□□ -1.33
GTF2F1-206ENST00000598607 ATP5EP56381 51 aaPredicted RBP6.69□□□□□ -1.34
GTF2F1-206ENST00000598607 R4GN34 69 aa6.69□□□□□ -1.34
GTF2F1-206ENST00000598607 KRTAP19-6Q3LI70 58 aa6.67□□□□□ -1.34
GTF2F1-206ENST00000598607 SSPOA2VEC9 5147 aa6.66□□□□□ -1.34
GTF2F1-206ENST00000598607 MT1BP07438 61 aa6.65□□□□□ -1.34
GTF2F1-206ENST00000598607 M0QZ58 72 aa6.64□□□□□ -1.35
GTF2F1-206ENST00000598607 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
GTF2F1-206ENST00000598607 KRTAP4-6Q9BYQ5 205 aa6.63□□□□□ -1.35
GTF2F1-206ENST00000598607 TMEM258P61165 79 aa6.61□□□□□ -1.35
GTF2F1-206ENST00000598607 SEC61GP60059 68 aa6.59□□□□□ -1.35
GTF2F1-206ENST00000598607 SERP1Q9Y6X1 66 aa6.56□□□□□ -1.36
GTF2F1-206ENST00000598607 LINC01554Q52M75 96 aa6.51□□□□□ -1.37
GTF2F1-206ENST00000598607 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
GTF2F1-206ENST00000598607 A6NN06 94 aa6.49□□□□□ -1.37
GTF2F1-206ENST00000598607 FCGBPQ9Y6R7 5405 aaPredicted RBP6.47□□□□□ -1.37
GTF2F1-206ENST00000598607 KRTAP10-5P60370 271 aa6.46□□□□□ -1.38
GTF2F1-206ENST00000598607 A0A1B0GU69 56 aa6.45□□□□□ -1.38
GTF2F1-206ENST00000598607 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.41□□□□□ -1.38
GTF2F1-206ENST00000598607 A0A1B0GU33 70 aa6.4□□□□□ -1.38
GTF2F1-206ENST00000598607 KRTAP13-4Q3LI77 160 aa6.4□□□□□ -1.38
GTF2F1-206ENST00000598607 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
GTF2F1-206ENST00000598607 PRR15LQ9BU68 103 aa6.38□□□□□ -1.39
GTF2F1-206ENST00000598607 PCP4P48539 62 aa6.35□□□□□ -1.39
GTF2F1-206ENST00000598607 LINC01558Q9Y6Z2 57 aa6.35□□□□□ -1.39
GTF2F1-206ENST00000598607 MT1XP80297 61 aa6.31□□□□□ -1.4
GTF2F1-206ENST00000598607 SPATA8Q6RVD6 105 aa6.31□□□□□ -1.4
GTF2F1-206ENST00000598607 A0A0D9SG42 100 aa6.26□□□□□ -1.41
GTF2F1-206ENST00000598607 KRTAP9-7A8MTY7 169 aa6.26□□□□□ -1.41
GTF2F1-206ENST00000598607 SMIM26A0A096LP01 95 aa6.25□□□□□ -1.41
GTF2F1-206ENST00000598607 V9GYY9 64 aa6.22□□□□□ -1.41
GTF2F1-206ENST00000598607 CAMK2N1Q7Z7J9 78 aa6.21□□□□□ -1.42
GTF2F1-206ENST00000598607 MACF1Q9UPN3 7388 aaKnown RBP6.19□□□□□ -1.42
GTF2F1-206ENST00000598607 SPINT4Q6UDR6 99 aa6.18□□□□□ -1.42
GTF2F1-206ENST00000598607 UQCR11O14957 56 aa6.15□□□□□ -1.42
GTF2F1-206ENST00000598607 KRTAP12-1P59990 96 aa6.15□□□□□ -1.42
GTF2F1-206ENST00000598607 Q1T7F1 81 aa6.15□□□□□ -1.42
GTF2F1-206ENST00000598607 KRTAP12-2P59991 146 aa6.14□□□□□ -1.43
GTF2F1-206ENST00000598607 A8MU10 97 aa6.13□□□□□ -1.43
GTF2F1-206ENST00000598607 KRTAP6-3Q3LI67 103 aa6.13□□□□□ -1.43
GTF2F1-206ENST00000598607 RPS28P62857 69 aaKnown RBP6.12□□□□□ -1.43
GTF2F1-206ENST00000598607 PSPHP1O15172 72 aa6.07□□□□□ -1.44
GTF2F1-206ENST00000598607 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
GTF2F1-206ENST00000598607 KRTAP10-12P60413 245 aa6.02□□□□□ -1.45
GTF2F1-206ENST00000598607 MIR22HGQ0VDD5 57 aa6.02□□□□□ -1.45
GTF2F1-206ENST00000598607 SYNE2Q8WXH0 6885 aaKnown RBP6□□□□□ -1.45
GTF2F1-206ENST00000598607 KRTAP5-9P26371 169 aa5.97□□□□□ -1.45
GTF2F1-206ENST00000598607 KRTAP8-1Q8IUC2 63 aa5.97□□□□□ -1.45
GTF2F1-206ENST00000598607 KRTAP4-8A0A0G2JLE6 195 aa5.93□□□□□ -1.46
GTF2F1-206ENST00000598607 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
GTF2F1-206ENST00000598607 A6NED7 52 aa5.91□□□□□ -1.46
GTF2F1-206ENST00000598607 K7ERS5 55 aa5.9□□□□□ -1.46
GTF2F1-206ENST00000598607 KMT2DO14686 5537 aa5.89□□□□□ -1.47
GTF2F1-206ENST00000598607 SPRR2FQ96RM1 72 aa5.87□□□□□ -1.47
GTF2F1-206ENST00000598607 C10orf95Q9H7T3 257 aa5.84□□□□□ -1.47
GTF2F1-206ENST00000598607 TNP1P09430 55 aa5.82□□□□□ -1.48
GTF2F1-206ENST00000598607 MUC12Q9UKN1 5478 aa5.75□□□□□ -1.49
GTF2F1-206ENST00000598607 CDC42SE1Q9NRR8 79 aa5.72□□□□□ -1.49
GTF2F1-206ENST00000598607 SPRR2EP22531 72 aa5.71□□□□□ -1.5
GTF2F1-206ENST00000598607 SPRR2BP35325 72 aa5.71□□□□□ -1.5
GTF2F1-206ENST00000598607 SPRR2AP35326 72 aa5.71□□□□□ -1.5
GTF2F1-206ENST00000598607 LCE1AQ5T7P2 110 aa5.66□□□□□ -1.5
GTF2F1-206ENST00000598607 KRTAP25-1Q3LHN0 102 aa5.65□□□□□ -1.5
GTF2F1-206ENST00000598607 KRTAP19-7Q3SYF9 63 aa5.63□□□□□ -1.51
GTF2F1-206ENST00000598607 LCE3AQ5TA76 89 aa5.63□□□□□ -1.51
GTF2F1-206ENST00000598607 NEBP20929 6669 aa5.62□□□□□ -1.51
GTF2F1-206ENST00000598607 MDN1Q9NU22 5596 aa5.59□□□□□ -1.51
GTF2F1-206ENST00000598607 MT1EP04732 61 aa5.58□□□□□ -1.52
GTF2F1-206ENST00000598607 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
GTF2F1-206ENST00000598607 LCE3BQ5TA77 95 aa5.54□□□□□ -1.52
GTF2F1-206ENST00000598607 KRTAP9-9Q9BYP9 154 aa5.54□□□□□ -1.52
GTF2F1-206ENST00000598607 KRTAP9-4Q9BYQ2 154 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms