RNA–Protein interactions for RNA: ENST00000592737.5

NCLN-208, Transcript of nicalin, humanhuman

TSL 3

Gene NCLN, Length 2,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-208ENST00000592737 KRTAP3-3Q9BYR6 98 aa8.78□□□□□ -1
NCLN-208ENST00000592737 TPRXLQ17RH7 258 aa8.76□□□□□ -1.01
NCLN-208ENST00000592737 PKHD1L1Q86WI1 4243 aa8.76□□□□□ -1.01
NCLN-208ENST00000592737 KRTAP10-4P60372 401 aaPredicted RBP8.75□□□□□ -1.01
NCLN-208ENST00000592737 C10orf95Q9H7T3 257 aa8.74□□□□□ -1.01
NCLN-208ENST00000592737 S4R3F8 94 aa8.74□□□□□ -1.01
NCLN-208ENST00000592737 DYNC1H1Q14204 4646 aaKnown RBP8.74□□□□□ -1.01
NCLN-208ENST00000592737 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
NCLN-208ENST00000592737 APOBP04114 4563 aaKnown RBP8.69□□□□□ -1.02
NCLN-208ENST00000592737 KRTAP10-8P60410 259 aa8.67□□□□□ -1.02
NCLN-208ENST00000592737 A0A1B0GVY2 172 aa8.6□□□□□ -1.03
NCLN-208ENST00000592737 KRTAP12-2P59991 146 aa8.6□□□□□ -1.03
NCLN-208ENST00000592737 XP32Q5T750 250 aa8.57□□□□□ -1.04
NCLN-208ENST00000592737 FAT3Q8TDW7 4589 aa8.53□□□□□ -1.04
NCLN-208ENST00000592737 HSPG2P98160 4391 aa8.51□□□□□ -1.05
NCLN-208ENST00000592737 NDUFAF8A1L188 74 aa8.51□□□□□ -1.05
NCLN-208ENST00000592737 LRP1Q07954 4544 aaKnown RBP8.49□□□□□ -1.05
NCLN-208ENST00000592737 KRTAP12-1P59990 96 aa8.47□□□□□ -1.05
NCLN-208ENST00000592737 KRTAP15-1Q3LI76 137 aa8.46□□□□□ -1.06
NCLN-208ENST00000592737 MYCBP2O75592 4640 aa8.43□□□□□ -1.06
NCLN-208ENST00000592737 TNXBP22105 4242 aa8.41□□□□□ -1.06
NCLN-208ENST00000592737 Q5VSD8 79 aa8.39□□□□□ -1.07
NCLN-208ENST00000592737 M0QZ58 72 aa8.33□□□□□ -1.08
NCLN-208ENST00000592737 LPAP08519 4548 aa8.24□□□□□ -1.09
NCLN-208ENST00000592737 A0A0A0MQY5 61 aa8.22□□□□□ -1.09
NCLN-208ENST00000592737 RYR2Q92736 4967 aa8.22□□□□□ -1.09
NCLN-208ENST00000592737 KMT2CQ8NEZ4 4911 aaKnown RBP8.18□□□□□ -1.1
NCLN-208ENST00000592737 R4GN34 69 aa8.18□□□□□ -1.1
NCLN-208ENST00000592737 MT1HL1P0DM35 61 aa8.11□□□□□ -1.11
NCLN-208ENST00000592737 LRP2P98164 4655 aa8.1□□□□□ -1.11
NCLN-208ENST00000592737 KRTAP17-1Q9BYP8 105 aa8.09□□□□□ -1.11
NCLN-208ENST00000592737 PLAC4Q8WY50 150 aa8.02□□□□□ -1.12
NCLN-208ENST00000592737 RYR1P21817 5038 aa7.98□□□□□ -1.13
NCLN-208ENST00000592737 LORP23490 312 aaPredicted RBP7.98□□□□□ -1.13
NCLN-208ENST00000592737 RYR3Q15413 4870 aa7.95□□□□□ -1.14
NCLN-208ENST00000592737 KIAA1109Q2LD37 5005 aa7.89□□□□□ -1.15
NCLN-208ENST00000592737 CAMK2N1Q7Z7J9 78 aa7.85□□□□□ -1.15
NCLN-208ENST00000592737 SEC61BP60468 96 aaKnown RBP7.8□□□□□ -1.16
NCLN-208ENST00000592737 LUZP6Q538Z0 58 aa7.79□□□□□ -1.16
NCLN-208ENST00000592737 ABCA13Q86UQ4 5058 aa7.77□□□□□ -1.16
NCLN-208ENST00000592737 J3QL48 77 aa7.76□□□□□ -1.17
NCLN-208ENST00000592737 PP632Q6XCG6 107 aa7.73□□□□□ -1.17
NCLN-208ENST00000592737 EPPK1P58107 5090 aaKnown RBP7.71□□□□□ -1.18
NCLN-208ENST00000592737 KRTAP4-1Q9BYQ7 146 aa7.7□□□□□ -1.18
NCLN-208ENST00000592737 MUC17Q685J3 4493 aa7.65□□□□□ -1.18
NCLN-208ENST00000592737 KRTAP4-5Q9BYR2 181 aa7.63□□□□□ -1.19
NCLN-208ENST00000592737 TNP1P09430 55 aa7.51□□□□□ -1.21
NCLN-208ENST00000592737 KRTAP19-2Q3LHN2 52 aa7.48□□□□□ -1.21
NCLN-208ENST00000592737 BIRC6Q9NR09 4857 aa7.39□□□□□ -1.23
NCLN-208ENST00000592737 MUC2Q02817 5179 aa7.36□□□□□ -1.23
NCLN-208ENST00000592737 KRTAP23-1A1A580 65 aa7.29□□□□□ -1.24
NCLN-208ENST00000592737 FLGP20930 4061 aaPredicted RBP7.26□□□□□ -1.25
NCLN-208ENST00000592737 SPRR5A0A1B0GTR4 108 aa7.25□□□□□ -1.25
NCLN-208ENST00000592737 PCLOQ9Y6V0 5065 aa7.24□□□□□ -1.25
NCLN-208ENST00000592737 HERC2O95714 4834 aa7.16□□□□□ -1.26
NCLN-208ENST00000592737 HERC1Q15751 4861 aa7.09□□□□□ -1.27
NCLN-208ENST00000592737 LCE3AQ5TA76 89 aa7.08□□□□□ -1.28
NCLN-208ENST00000592737 M0R2T5 61 aa7.06□□□□□ -1.28
NCLN-208ENST00000592737 SPRR2GQ9BYE4 73 aa7.03□□□□□ -1.28
NCLN-208ENST00000592737 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
NCLN-208ENST00000592737 FAT4Q6V0I7 4981 aa6.97□□□□□ -1.29
NCLN-208ENST00000592737 LCE2CQ5TA81 110 aa6.94□□□□□ -1.3
NCLN-208ENST00000592737 KRTAP10-10P60014 251 aa6.89□□□□□ -1.31
NCLN-208ENST00000592737 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
NCLN-208ENST00000592737 MT1FP04733 61 aa6.8□□□□□ -1.32
NCLN-208ENST00000592737 KRTAP8-1Q8IUC2 63 aa6.78□□□□□ -1.32
NCLN-208ENST00000592737 MT1HP80294 61 aa6.78□□□□□ -1.32
NCLN-208ENST00000592737 MT2AP02795 61 aa6.77□□□□□ -1.33
NCLN-208ENST00000592737 HMCN2Q8NDA2 5059 aa6.74□□□□□ -1.33
NCLN-208ENST00000592737 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
NCLN-208ENST00000592737 INE1O15225 51 aa6.7□□□□□ -1.34
NCLN-208ENST00000592737 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
NCLN-208ENST00000592737 KRTAP10-5P60370 271 aa6.67□□□□□ -1.34
NCLN-208ENST00000592737 UBR4Q5T4S7 5183 aa6.65□□□□□ -1.34
NCLN-208ENST00000592737 MT1XP80297 61 aa6.64□□□□□ -1.35
NCLN-208ENST00000592737 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
NCLN-208ENST00000592737 KRTAP19-8Q3LI54 63 aa6.63□□□□□ -1.35
NCLN-208ENST00000592737 RNF213Q63HN8 5207 aa6.63□□□□□ -1.35
NCLN-208ENST00000592737 MT1BP07438 61 aa6.6□□□□□ -1.35
NCLN-208ENST00000592737 KRTAP10-7P60409 375 aaPredicted RBP6.55□□□□□ -1.36
NCLN-208ENST00000592737 KRTAP19-5Q3LI72 72 aa6.34□□□□□ -1.4
NCLN-208ENST00000592737 KRTAP9-3Q9BYQ3 159 aa6.34□□□□□ -1.4
NCLN-208ENST00000592737 LCE3CQ5T5A8 94 aa6.31□□□□□ -1.4
NCLN-208ENST00000592737 KMT2DO14686 5537 aa6.18□□□□□ -1.42
NCLN-208ENST00000592737 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
NCLN-208ENST00000592737 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
NCLN-208ENST00000592737 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
NCLN-208ENST00000592737 LCE2BO14633 110 aa6.08□□□□□ -1.44
NCLN-208ENST00000592737 USH2AO75445 5202 aa6.06□□□□□ -1.44
NCLN-208ENST00000592737 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
NCLN-208ENST00000592737 KRTAP2-3P0C7H8 128 aa5.93□□□□□ -1.46
NCLN-208ENST00000592737 KRTAP2-4Q9BYR9 128 aa5.93□□□□□ -1.46
NCLN-208ENST00000592737 KRTAP2-1Q9BYU5 128 aa5.93□□□□□ -1.46
NCLN-208ENST00000592737 KRTAP19-7Q3SYF9 63 aa5.9□□□□□ -1.46
NCLN-208ENST00000592737 FSIP2Q5CZC0 6907 aa5.84□□□□□ -1.47
NCLN-208ENST00000592737 MT1LQ93083 61 aa5.77□□□□□ -1.49
NCLN-208ENST00000592737 LCE2AQ5TA79 106 aaPredicted RBP5.73□□□□□ -1.49
NCLN-208ENST00000592737 MT1EP04732 61 aa5.71□□□□□ -1.49
NCLN-208ENST00000592737 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
NCLN-208ENST00000592737 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms