RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 SPTSSBQ8NFR3 76 aa8.23□□□□□ -1.09
MBD1-227ENST00000592060 MYCBP2O75592 4640 aa8.2□□□□□ -1.1
MBD1-227ENST00000592060 PMAIP1Q13794 54 aa8.19□□□□□ -1.1
MBD1-227ENST00000592060 SPATA8Q6RVD6 105 aa8.16□□□□□ -1.1
MBD1-227ENST00000592060 UQCR11O14957 56 aa8.15□□□□□ -1.11
MBD1-227ENST00000592060 A6NN06 94 aa8.14□□□□□ -1.11
MBD1-227ENST00000592060 SEC61GP60059 68 aa8.11□□□□□ -1.11
MBD1-227ENST00000592060 MIR22HGQ0VDD5 57 aa8.11□□□□□ -1.11
MBD1-227ENST00000592060 UBR4Q5T4S7 5183 aa8.09□□□□□ -1.11
MBD1-227ENST00000592060 TPRXLQ17RH7 258 aa8.09□□□□□ -1.11
MBD1-227ENST00000592060 KRTAP3-3Q9BYR6 98 aa8.02□□□□□ -1.13
MBD1-227ENST00000592060 KTN1-AS1Q86SY8 53 aa8□□□□□ -1.13
MBD1-227ENST00000592060 H0YAA0 97 aa7.97□□□□□ -1.13
MBD1-227ENST00000592060 H1FX-AS1Q4G0G2 97 aa7.97□□□□□ -1.13
MBD1-227ENST00000592060 A0A1B0GU33 70 aa7.95□□□□□ -1.14
MBD1-227ENST00000592060 S4R3F8 94 aa7.95□□□□□ -1.14
MBD1-227ENST00000592060 HMCN2Q8NDA2 5059 aa7.92□□□□□ -1.14
MBD1-227ENST00000592060 LRP2P98164 4655 aa7.91□□□□□ -1.14
MBD1-227ENST00000592060 LPAP08519 4548 aa7.89□□□□□ -1.15
MBD1-227ENST00000592060 KRTAP10-6P60371 365 aaPredicted RBP7.86□□□□□ -1.15
MBD1-227ENST00000592060 KRTAP3-2Q9BYR7 98 aa7.84□□□□□ -1.15
MBD1-227ENST00000592060 J3QL48 77 aa7.82□□□□□ -1.16
MBD1-227ENST00000592060 RBM12B-AS1Q9P1G2 102 aa7.82□□□□□ -1.16
MBD1-227ENST00000592060 SEC61BP60468 96 aaKnown RBP7.76□□□□□ -1.17
MBD1-227ENST00000592060 KRTAP13-4Q3LI77 160 aa7.73□□□□□ -1.17
MBD1-227ENST00000592060 P0C880 135 aa7.72□□□□□ -1.17
MBD1-227ENST00000592060 ADM2Q7Z4H4 148 aa7.72□□□□□ -1.17
MBD1-227ENST00000592060 PRAC1Q96KF2 57 aa7.7□□□□□ -1.18
MBD1-227ENST00000592060 MUC17Q685J3 4493 aa7.69□□□□□ -1.18
MBD1-227ENST00000592060 CSAG1Q6PB30 78 aa7.69□□□□□ -1.18
MBD1-227ENST00000592060 KRTAP4-1Q9BYQ7 146 aa7.69□□□□□ -1.18
MBD1-227ENST00000592060 RNF213Q63HN8 5207 aa7.65□□□□□ -1.18
MBD1-227ENST00000592060 K7ERS5 55 aa7.6□□□□□ -1.19
MBD1-227ENST00000592060 A0A0D9SG42 100 aa7.57□□□□□ -1.2
MBD1-227ENST00000592060 KRTAP19-2Q3LHN2 52 aa7.57□□□□□ -1.2
MBD1-227ENST00000592060 M0QZ58 72 aa7.49□□□□□ -1.21
MBD1-227ENST00000592060 KRTAP12-2P59991 146 aa7.44□□□□□ -1.22
MBD1-227ENST00000592060 KRTAP12-1P59990 96 aa7.43□□□□□ -1.22
MBD1-227ENST00000592060 ROMO1P60602 79 aa7.42□□□□□ -1.22
MBD1-227ENST00000592060 KRTAP25-1Q3LHN0 102 aa7.37□□□□□ -1.23
MBD1-227ENST00000592060 LINC01554Q52M75 96 aa7.34□□□□□ -1.23
MBD1-227ENST00000592060 SPINT4Q6UDR6 99 aa7.34□□□□□ -1.23
MBD1-227ENST00000592060 LORP23490 312 aaPredicted RBP7.33□□□□□ -1.24
MBD1-227ENST00000592060 R4GN34 69 aa7.33□□□□□ -1.24
MBD1-227ENST00000592060 KRTAP9-2Q9BYQ4 174 aa7.31□□□□□ -1.24
MBD1-227ENST00000592060 FLGP20930 4061 aaPredicted RBP7.3□□□□□ -1.24
MBD1-227ENST00000592060 CRIPTQ9P021 101 aa7.28□□□□□ -1.24
MBD1-227ENST00000592060 MUC2Q02817 5179 aa7.28□□□□□ -1.24
MBD1-227ENST00000592060 KRTAP9-6A0A140TA67 174 aa7.22□□□□□ -1.25
MBD1-227ENST00000592060 LCE2CQ5TA81 110 aa7.19□□□□□ -1.26
MBD1-227ENST00000592060 FAT4Q6V0I7 4981 aa7.15□□□□□ -1.26
MBD1-227ENST00000592060 C10orf95Q9H7T3 257 aa7.11□□□□□ -1.27
MBD1-227ENST00000592060 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
MBD1-227ENST00000592060 MT1HP80294 61 aa7□□□□□ -1.29
MBD1-227ENST00000592060 CAMK2N1Q7Z7J9 78 aa6.91□□□□□ -1.3
MBD1-227ENST00000592060 M0R2T5 61 aa6.89□□□□□ -1.31
MBD1-227ENST00000592060 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
MBD1-227ENST00000592060 KRTAP19-1Q8IUB9 90 aa6.86□□□□□ -1.31
MBD1-227ENST00000592060 FSIP2Q5CZC0 6907 aa6.84□□□□□ -1.31
MBD1-227ENST00000592060 MT2AP02795 61 aa6.83□□□□□ -1.32
MBD1-227ENST00000592060 MT1FP04733 61 aa6.81□□□□□ -1.32
MBD1-227ENST00000592060 KRTAP9-8Q9BYQ0 159 aa6.8□□□□□ -1.32
MBD1-227ENST00000592060 CRCT1Q9UGL9 99 aa6.8□□□□□ -1.32
MBD1-227ENST00000592060 LCE2DQ5TA82 110 aaPredicted RBP6.75□□□□□ -1.33
MBD1-227ENST00000592060 KRTAP10-10P60014 251 aa6.75□□□□□ -1.33
MBD1-227ENST00000592060 PLAC4Q8WY50 150 aa6.69□□□□□ -1.34
MBD1-227ENST00000592060 PP632Q6XCG6 107 aa6.68□□□□□ -1.34
MBD1-227ENST00000592060 KRTAP15-1Q3LI76 137 aa6.67□□□□□ -1.34
MBD1-227ENST00000592060 TNP1P09430 55 aa6.64□□□□□ -1.35
MBD1-227ENST00000592060 KRTAP19-8Q3LI54 63 aa6.64□□□□□ -1.35
MBD1-227ENST00000592060 KRTAP23-1A1A580 65 aa6.57□□□□□ -1.36
MBD1-227ENST00000592060 MT1BP07438 61 aa6.55□□□□□ -1.36
MBD1-227ENST00000592060 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
MBD1-227ENST00000592060 KRTAP9-7A8MTY7 169 aa6.44□□□□□ -1.38
MBD1-227ENST00000592060 MT1XP80297 61 aa6.44□□□□□ -1.38
MBD1-227ENST00000592060 KRTAP10-5P60370 271 aa6.43□□□□□ -1.38
MBD1-227ENST00000592060 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.38□□□□□ -1.39
MBD1-227ENST00000592060 LCE3AQ5TA76 89 aa6.35□□□□□ -1.39
MBD1-227ENST00000592060 NDUFAF8A1L188 74 aa6.33□□□□□ -1.4
MBD1-227ENST00000592060 LCE2BO14633 110 aa6.3□□□□□ -1.4
MBD1-227ENST00000592060 H3BS24 57 aa6.26□□□□□ -1.41
MBD1-227ENST00000592060 SSPOA2VEC9 5147 aa6.24□□□□□ -1.41
MBD1-227ENST00000592060 KRTAP8-1Q8IUC2 63 aa6.23□□□□□ -1.41
MBD1-227ENST00000592060 USH2AO75445 5202 aa6.22□□□□□ -1.41
MBD1-227ENST00000592060 KRTAP10-7P60409 375 aaPredicted RBP6.2□□□□□ -1.42
MBD1-227ENST00000592060 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
MBD1-227ENST00000592060 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
MBD1-227ENST00000592060 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
MBD1-227ENST00000592060 FCGBPQ9Y6R7 5405 aaPredicted RBP6.12□□□□□ -1.43
MBD1-227ENST00000592060 LUZP6Q538Z0 58 aa6.07□□□□□ -1.44
MBD1-227ENST00000592060 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
MBD1-227ENST00000592060 SYNE2Q8WXH0 6885 aaKnown RBP6.03□□□□□ -1.44
MBD1-227ENST00000592060 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
MBD1-227ENST00000592060 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.46
MBD1-227ENST00000592060 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
MBD1-227ENST00000592060 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
MBD1-227ENST00000592060 KRTAP19-6Q3LI70 58 aa5.77□□□□□ -1.49
MBD1-227ENST00000592060 KRTAP6-3Q3LI67 103 aa5.76□□□□□ -1.49
MBD1-227ENST00000592060 KMT2DO14686 5537 aa5.74□□□□□ -1.49
MBD1-227ENST00000592060 KRTAP19-7Q3SYF9 63 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms