RNA–Protein interactions for RNA: ENST00000591247.5

LSM12-204, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,484 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-204ENST00000591247 MYCBP2O75592 4640 aa9.14□□□□□ -0.95
LSM12-204ENST00000591247 DMBT1Q9UGM3 2413 aaPredicted RBP9.1□□□□□ -0.95
LSM12-204ENST00000591247 MT1HL1P0DM35 61 aa9.02□□□□□ -0.97
LSM12-204ENST00000591247 KRTAP3-1Q9BYR8 98 aa9□□□□□ -0.97
LSM12-204ENST00000591247 H0YAA0 97 aa8.99□□□□□ -0.97
LSM12-204ENST00000591247 H3BS24 57 aa8.97□□□□□ -0.97
LSM12-204ENST00000591247 XP32Q5T750 250 aa8.93□□□□□ -0.98
LSM12-204ENST00000591247 RPL37P61927 97 aaKnown RBP8.92□□□□□ -0.98
LSM12-204ENST00000591247 KRTAP25-1Q3LHN0 102 aa8.9□□□□□ -0.98
LSM12-204ENST00000591247 A0A1B0GU33 70 aa8.9□□□□□ -0.99
LSM12-204ENST00000591247 COX6B2Q6YFQ2 88 aa8.86□□□□□ -0.99
LSM12-204ENST00000591247 H1FX-AS1Q4G0G2 97 aa8.85□□□□□ -0.99
LSM12-204ENST00000591247 KRTAP4-5Q9BYR2 181 aa8.84□□□□□ -0.99
LSM12-204ENST00000591247 ABCA13Q86UQ4 5058 aa8.84□□□□□ -0.99
LSM12-204ENST00000591247 LRP2P98164 4655 aa8.79□□□□□ -1
LSM12-204ENST00000591247 LPAP08519 4548 aa8.78□□□□□ -1
LSM12-204ENST00000591247 ROMO1P60602 79 aa8.77□□□□□ -1.01
LSM12-204ENST00000591247 K7ERS5 55 aa8.71□□□□□ -1.01
LSM12-204ENST00000591247 TPRXLQ17RH7 258 aa8.69□□□□□ -1.02
LSM12-204ENST00000591247 CRIPTQ9P021 101 aa8.65□□□□□ -1.02
LSM12-204ENST00000591247 KRTAP3-3Q9BYR6 98 aa8.64□□□□□ -1.03
LSM12-204ENST00000591247 HERC2O95714 4834 aa8.64□□□□□ -1.03
LSM12-204ENST00000591247 BIRC6Q9NR09 4857 aa8.55□□□□□ -1.04
LSM12-204ENST00000591247 S4R3F8 94 aa8.55□□□□□ -1.04
LSM12-204ENST00000591247 P0C880 135 aa8.51□□□□□ -1.05
LSM12-204ENST00000591247 KRTAP10-6P60371 365 aaPredicted RBP8.48□□□□□ -1.05
LSM12-204ENST00000591247 J3QL48 77 aa8.46□□□□□ -1.05
LSM12-204ENST00000591247 KRTAP13-4Q3LI77 160 aa8.44□□□□□ -1.06
LSM12-204ENST00000591247 KRTAP3-2Q9BYR7 98 aa8.44□□□□□ -1.06
LSM12-204ENST00000591247 MUC17Q685J3 4493 aa8.44□□□□□ -1.06
LSM12-204ENST00000591247 A0A0D9SG42 100 aa8.4□□□□□ -1.06
LSM12-204ENST00000591247 SPINT4Q6UDR6 99 aa8.36□□□□□ -1.07
LSM12-204ENST00000591247 SEC61BP60468 96 aaKnown RBP8.35□□□□□ -1.07
LSM12-204ENST00000591247 KRTAP4-1Q9BYQ7 146 aa8.33□□□□□ -1.08
LSM12-204ENST00000591247 C10orf95Q9H7T3 257 aa8.29□□□□□ -1.08
LSM12-204ENST00000591247 PCLOQ9Y6V0 5065 aa8.27□□□□□ -1.09
LSM12-204ENST00000591247 HERC1Q15751 4861 aa8.23□□□□□ -1.09
LSM12-204ENST00000591247 KRTAP15-1Q3LI76 137 aa8.22□□□□□ -1.09
LSM12-204ENST00000591247 KRTAP12-2P59991 146 aa8.2□□□□□ -1.1
LSM12-204ENST00000591247 MUC2Q02817 5179 aa8.19□□□□□ -1.1
LSM12-204ENST00000591247 HMCN2Q8NDA2 5059 aa8.17□□□□□ -1.1
LSM12-204ENST00000591247 KRTAP19-2Q3LHN2 52 aa8.15□□□□□ -1.1
LSM12-204ENST00000591247 NDUFAF8A1L188 74 aa8.13□□□□□ -1.11
LSM12-204ENST00000591247 KRTAP12-1P59990 96 aa8.12□□□□□ -1.11
LSM12-204ENST00000591247 M0QZ58 72 aa8.03□□□□□ -1.12
LSM12-204ENST00000591247 FLGP20930 4061 aaPredicted RBP8□□□□□ -1.13
LSM12-204ENST00000591247 LORP23490 312 aaPredicted RBP7.95□□□□□ -1.14
LSM12-204ENST00000591247 R4GN34 69 aa7.91□□□□□ -1.14
LSM12-204ENST00000591247 FAT4Q6V0I7 4981 aa7.83□□□□□ -1.16
LSM12-204ENST00000591247 UBR4Q5T4S7 5183 aa7.81□□□□□ -1.16
LSM12-204ENST00000591247 RNF213Q63HN8 5207 aa7.81□□□□□ -1.16
LSM12-204ENST00000591247 LCE2CQ5TA81 110 aa7.77□□□□□ -1.17
LSM12-204ENST00000591247 PLAC4Q8WY50 150 aa7.69□□□□□ -1.18
LSM12-204ENST00000591247 MT1HP80294 61 aa7.56□□□□□ -1.2
LSM12-204ENST00000591247 M0R2T5 61 aa7.51□□□□□ -1.21
LSM12-204ENST00000591247 PP632Q6XCG6 107 aa7.47□□□□□ -1.21
LSM12-204ENST00000591247 CAMK2N1Q7Z7J9 78 aa7.46□□□□□ -1.22
LSM12-204ENST00000591247 LUZP6Q538Z0 58 aa7.42□□□□□ -1.22
LSM12-204ENST00000591247 KRTAP19-1Q8IUB9 90 aa7.4□□□□□ -1.23
LSM12-204ENST00000591247 SPRR2GQ9BYE4 73 aa7.4□□□□□ -1.23
LSM12-204ENST00000591247 MT2AP02795 61 aa7.37□□□□□ -1.23
LSM12-204ENST00000591247 MT1FP04733 61 aa7.37□□□□□ -1.23
LSM12-204ENST00000591247 KRTAP9-8Q9BYQ0 159 aa7.36□□□□□ -1.23
LSM12-204ENST00000591247 A0A0A0MQY5 61 aa7.35□□□□□ -1.23
LSM12-204ENST00000591247 KRTAP10-10P60014 251 aa7.31□□□□□ -1.24
LSM12-204ENST00000591247 TNP1P09430 55 aa7.15□□□□□ -1.27
LSM12-204ENST00000591247 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
LSM12-204ENST00000591247 KRTAP19-8Q3LI54 63 aa7.12□□□□□ -1.27
LSM12-204ENST00000591247 SPRR5A0A1B0GTR4 108 aa7.11□□□□□ -1.27
LSM12-204ENST00000591247 KRTAP9-3Q9BYQ3 159 aa7.06□□□□□ -1.28
LSM12-204ENST00000591247 MT1BP07438 61 aa7.06□□□□□ -1.28
LSM12-204ENST00000591247 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
LSM12-204ENST00000591247 MT1XP80297 61 aa6.93□□□□□ -1.3
LSM12-204ENST00000591247 LCE2AQ5TA79 106 aaPredicted RBP6.92□□□□□ -1.3
LSM12-204ENST00000591247 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
LSM12-204ENST00000591247 LCE2BO14633 110 aa6.83□□□□□ -1.32
LSM12-204ENST00000591247 USH2AO75445 5202 aa6.8□□□□□ -1.32
LSM12-204ENST00000591247 KRTAP10-7P60409 375 aaPredicted RBP6.72□□□□□ -1.33
LSM12-204ENST00000591247 KRTAP8-1Q8IUC2 63 aa6.68□□□□□ -1.34
LSM12-204ENST00000591247 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
LSM12-204ENST00000591247 PRO2289Q9P1D8 64 aa6.67□□□□□ -1.34
LSM12-204ENST00000591247 INE1O15225 51 aa6.54□□□□□ -1.36
LSM12-204ENST00000591247 KMT2DO14686 5537 aa6.53□□□□□ -1.36
LSM12-204ENST00000591247 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
LSM12-204ENST00000591247 SSPOA2VEC9 5147 aa6.42□□□□□ -1.38
LSM12-204ENST00000591247 KRTAP4-8A0A0G2JLE6 195 aa6.38□□□□□ -1.39
LSM12-204ENST00000591247 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
LSM12-204ENST00000591247 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
LSM12-204ENST00000591247 FSIP2Q5CZC0 6907 aa6.3□□□□□ -1.4
LSM12-204ENST00000591247 KRTAP19-6Q3LI70 58 aa6.21□□□□□ -1.42
LSM12-204ENST00000591247 KRTAP19-7Q3SYF9 63 aa6.19□□□□□ -1.42
LSM12-204ENST00000591247 LCE2DQ5TA82 110 aaPredicted RBP6.16□□□□□ -1.42
LSM12-204ENST00000591247 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
LSM12-204ENST00000591247 FCGBPQ9Y6R7 5405 aaPredicted RBP6.03□□□□□ -1.44
LSM12-204ENST00000591247 MT1EP04732 61 aa6.03□□□□□ -1.44
LSM12-204ENST00000591247 MT1LQ93083 61 aa5.98□□□□□ -1.45
LSM12-204ENST00000591247 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
LSM12-204ENST00000591247 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
LSM12-204ENST00000591247 MUC12Q9UKN1 5478 aa5.85□□□□□ -1.47
LSM12-204ENST00000591247 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms