RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 A0A1B0GU69 56 aa10.76□□□□□ -0.69
GCDH-214ENST00000591043 A6NN06 94 aa10.73□□□□□ -0.69
GCDH-214ENST00000591043 COX6B2Q6YFQ2 88 aa10.73□□□□□ -0.69
GCDH-214ENST00000591043 UBR4Q5T4S7 5183 aa10.69□□□□□ -0.7
GCDH-214ENST00000591043 TPRXLQ17RH7 258 aa10.67□□□□□ -0.7
GCDH-214ENST00000591043 KRTAP3-1Q9BYR8 98 aa10.67□□□□□ -0.7
GCDH-214ENST00000591043 SPATA8Q6RVD6 105 aa10.65□□□□□ -0.71
GCDH-214ENST00000591043 J3QL48 77 aa10.64□□□□□ -0.71
GCDH-214ENST00000591043 KTN1-AS1Q86SY8 53 aa10.64□□□□□ -0.71
GCDH-214ENST00000591043 SEC61GP60059 68 aa10.63□□□□□ -0.71
GCDH-214ENST00000591043 HMCN2Q8NDA2 5059 aa10.59□□□□□ -0.71
GCDH-214ENST00000591043 UQCR11O14957 56 aa10.57□□□□□ -0.72
GCDH-214ENST00000591043 MIR22HGQ0VDD5 57 aa10.49□□□□□ -0.73
GCDH-214ENST00000591043 S4R3F8 94 aa10.36□□□□□ -0.75
GCDH-214ENST00000591043 H1FX-AS1Q4G0G2 97 aa10.34□□□□□ -0.75
GCDH-214ENST00000591043 RBM12B-AS1Q9P1G2 102 aa10.34□□□□□ -0.75
GCDH-214ENST00000591043 SEC61BP60468 96 aaKnown RBP10.32□□□□□ -0.76
GCDH-214ENST00000591043 RNF213Q63HN8 5207 aa10.28□□□□□ -0.76
GCDH-214ENST00000591043 A0A1B0GU33 70 aa10.28□□□□□ -0.76
GCDH-214ENST00000591043 KRTAP3-3Q9BYR6 98 aa10.27□□□□□ -0.77
GCDH-214ENST00000591043 H0YAA0 97 aa10.19□□□□□ -0.78
GCDH-214ENST00000591043 LRP2P98164 4655 aa10.18□□□□□ -0.78
GCDH-214ENST00000591043 CSAG1Q6PB30 78 aa10.09□□□□□ -0.79
GCDH-214ENST00000591043 KRTAP10-6P60371 365 aaPredicted RBP10.06□□□□□ -0.8
GCDH-214ENST00000591043 ADM2Q7Z4H4 148 aa10.03□□□□□ -0.8
GCDH-214ENST00000591043 KRTAP3-2Q9BYR7 98 aa10.03□□□□□ -0.8
GCDH-214ENST00000591043 PRAC1Q96KF2 57 aa10.02□□□□□ -0.81
GCDH-214ENST00000591043 LPAP08519 4548 aa10.02□□□□□ -0.81
GCDH-214ENST00000591043 K7ERS5 55 aa9.97□□□□□ -0.81
GCDH-214ENST00000591043 P0C880 135 aa9.88□□□□□ -0.83
GCDH-214ENST00000591043 KRTAP4-1Q9BYQ7 146 aa9.87□□□□□ -0.83
GCDH-214ENST00000591043 MUC17Q685J3 4493 aa9.85□□□□□ -0.83
GCDH-214ENST00000591043 M0QZ58 72 aa9.81□□□□□ -0.84
GCDH-214ENST00000591043 KRTAP13-4Q3LI77 160 aa9.8□□□□□ -0.84
GCDH-214ENST00000591043 LINC01554Q52M75 96 aa9.8□□□□□ -0.84
GCDH-214ENST00000591043 MUC2Q02817 5179 aa9.73□□□□□ -0.85
GCDH-214ENST00000591043 KRTAP19-2Q3LHN2 52 aa9.73□□□□□ -0.85
GCDH-214ENST00000591043 A0A0D9SG42 100 aa9.7□□□□□ -0.86
GCDH-214ENST00000591043 KRTAP25-1Q3LHN0 102 aa9.68□□□□□ -0.86
GCDH-214ENST00000591043 ROMO1P60602 79 aa9.62□□□□□ -0.87
GCDH-214ENST00000591043 KRTAP9-2Q9BYQ4 174 aa9.62□□□□□ -0.87
GCDH-214ENST00000591043 R4GN34 69 aa9.57□□□□□ -0.88
GCDH-214ENST00000591043 KRTAP12-1P59990 96 aa9.52□□□□□ -0.88
GCDH-214ENST00000591043 KRTAP12-2P59991 146 aa9.49□□□□□ -0.89
GCDH-214ENST00000591043 FAT4Q6V0I7 4981 aa9.48□□□□□ -0.89
GCDH-214ENST00000591043 SPINT4Q6UDR6 99 aa9.47□□□□□ -0.89
GCDH-214ENST00000591043 KRTAP9-6A0A140TA67 174 aa9.42□□□□□ -0.9
GCDH-214ENST00000591043 FLGP20930 4061 aaPredicted RBP9.41□□□□□ -0.9
GCDH-214ENST00000591043 CRIPTQ9P021 101 aa9.4□□□□□ -0.9
GCDH-214ENST00000591043 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.91
GCDH-214ENST00000591043 LORP23490 312 aaPredicted RBP9.33□□□□□ -0.92
GCDH-214ENST00000591043 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
GCDH-214ENST00000591043 FSIP2Q5CZC0 6907 aa9.19□□□□□ -0.94
GCDH-214ENST00000591043 M0R2T5 61 aa9.13□□□□□ -0.95
GCDH-214ENST00000591043 MT1HP80294 61 aa9.12□□□□□ -0.95
GCDH-214ENST00000591043 C10orf95Q9H7T3 257 aa9.08□□□□□ -0.96
GCDH-214ENST00000591043 CAMK2N1Q7Z7J9 78 aa9.03□□□□□ -0.96
GCDH-214ENST00000591043 SPRR2GQ9BYE4 73 aa8.99□□□□□ -0.97
GCDH-214ENST00000591043 CRCT1Q9UGL9 99 aa8.99□□□□□ -0.97
GCDH-214ENST00000591043 LCE2DQ5TA82 110 aaPredicted RBP8.96□□□□□ -0.97
GCDH-214ENST00000591043 MT2AP02795 61 aa8.87□□□□□ -0.99
GCDH-214ENST00000591043 KRTAP10-10P60014 251 aa8.86□□□□□ -0.99
GCDH-214ENST00000591043 KRTAP19-1Q8IUB9 90 aa8.85□□□□□ -0.99
GCDH-214ENST00000591043 KRTAP9-8Q9BYQ0 159 aa8.85□□□□□ -0.99
GCDH-214ENST00000591043 PLAC4Q8WY50 150 aa8.84□□□□□ -0.99
GCDH-214ENST00000591043 KRTAP15-1Q3LI76 137 aa8.81□□□□□ -1
GCDH-214ENST00000591043 MT1FP04733 61 aa8.81□□□□□ -1
GCDH-214ENST00000591043 PP632Q6XCG6 107 aa8.77□□□□□ -1.01
GCDH-214ENST00000591043 TNP1P09430 55 aa8.7□□□□□ -1.02
GCDH-214ENST00000591043 KRTAP19-8Q3LI54 63 aa8.68□□□□□ -1.02
GCDH-214ENST00000591043 KRTAP23-1A1A580 65 aa8.66□□□□□ -1.02
GCDH-214ENST00000591043 H3BS24 57 aa8.61□□□□□ -1.03
GCDH-214ENST00000591043 KRTAP9-3Q9BYQ3 159 aa8.52□□□□□ -1.05
GCDH-214ENST00000591043 MT1BP07438 61 aa8.46□□□□□ -1.05
GCDH-214ENST00000591043 KRTAP9-7A8MTY7 169 aa8.43□□□□□ -1.06
GCDH-214ENST00000591043 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.4□□□□□ -1.06
GCDH-214ENST00000591043 NDUFAF8A1L188 74 aa8.38□□□□□ -1.07
GCDH-214ENST00000591043 USH2AO75445 5202 aa8.37□□□□□ -1.07
GCDH-214ENST00000591043 SSPOA2VEC9 5147 aa8.36□□□□□ -1.07
GCDH-214ENST00000591043 KRTAP10-5P60370 271 aa8.3□□□□□ -1.08
GCDH-214ENST00000591043 MT1XP80297 61 aa8.3□□□□□ -1.08
GCDH-214ENST00000591043 PRO2289Q9P1D8 64 aa8.29□□□□□ -1.08
GCDH-214ENST00000591043 FCGBPQ9Y6R7 5405 aaPredicted RBP8.22□□□□□ -1.09
GCDH-214ENST00000591043 LCE2BO14633 110 aa8.16□□□□□ -1.1
GCDH-214ENST00000591043 SYNE2Q8WXH0 6885 aaKnown RBP8.15□□□□□ -1.1
GCDH-214ENST00000591043 LCE3AQ5TA76 89 aa8.15□□□□□ -1.11
GCDH-214ENST00000591043 MACF1Q9UPN3 7388 aaKnown RBP8.11□□□□□ -1.11
GCDH-214ENST00000591043 SPRR5A0A1B0GTR4 108 aa8.07□□□□□ -1.12
GCDH-214ENST00000591043 KRTAP10-12P60413 245 aa8.07□□□□□ -1.12
GCDH-214ENST00000591043 KRTAP8-1Q8IUC2 63 aa8.07□□□□□ -1.12
GCDH-214ENST00000591043 LUZP6Q538Z0 58 aa8.02□□□□□ -1.13
GCDH-214ENST00000591043 KRTAP10-7P60409 375 aaPredicted RBP7.95□□□□□ -1.14
GCDH-214ENST00000591043 KRTAP12-3P60328 96 aa7.85□□□□□ -1.15
GCDH-214ENST00000591043 KRTAP19-6Q3LI70 58 aa7.73□□□□□ -1.17
GCDH-214ENST00000591043 NEBP20929 6669 aa7.65□□□□□ -1.18
GCDH-214ENST00000591043 KRTAP6-3Q3LI67 103 aa7.64□□□□□ -1.19
GCDH-214ENST00000591043 KRTAP19-5Q3LI72 72 aa7.6□□□□□ -1.19
GCDH-214ENST00000591043 A0A0A0MQY5 61 aa7.54□□□□□ -1.2
GCDH-214ENST00000591043 MUC12Q9UKN1 5478 aa7.5□□□□□ -1.21
GCDH-214ENST00000591043 KRTAP4-8A0A0G2JLE6 195 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms