RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 WDFY3Q8IZQ1 3526 aa4.78□□□□□ -1.64
SEH1L-208ENST00000590843 TRRAPQ9Y4A5 3859 aa4.76□□□□□ -1.65
SEH1L-208ENST00000590843 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
SEH1L-208ENST00000590843 LRP1BQ9NZR2 4599 aa4.75□□□□□ -1.65
SEH1L-208ENST00000590843 KRTAP3-3Q9BYR6 98 aa4.75□□□□□ -1.65
SEH1L-208ENST00000590843 DYNC1H1Q14204 4646 aaKnown RBP4.75□□□□□ -1.65
SEH1L-208ENST00000590843 RYR1P21817 5038 aa4.73□□□□□ -1.65
SEH1L-208ENST00000590843 SPRR2EP22531 72 aa4.72□□□□□ -1.65
SEH1L-208ENST00000590843 SPRR2BP35325 72 aa4.72□□□□□ -1.65
SEH1L-208ENST00000590843 SPRR2AP35326 72 aa4.72□□□□□ -1.65
SEH1L-208ENST00000590843 SPRR2GQ9BYE4 73 aa4.72□□□□□ -1.65
SEH1L-208ENST00000590843 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
SEH1L-208ENST00000590843 HERC1Q15751 4861 aa4.71□□□□□ -1.65
SEH1L-208ENST00000590843 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
SEH1L-208ENST00000590843 SMG1Q96Q15 3661 aaKnown RBP4.69□□□□□ -1.66
SEH1L-208ENST00000590843 MT1FP04733 61 aa4.69□□□□□ -1.66
SEH1L-208ENST00000590843 DNAH2Q9P225 4427 aa4.69□□□□□ -1.66
SEH1L-208ENST00000590843 KRTAP9-6A0A140TA67 174 aa4.68□□□□□ -1.66
SEH1L-208ENST00000590843 KRTAP3-2Q9BYR7 98 aa4.67□□□□□ -1.66
SEH1L-208ENST00000590843 KRTAP9-2Q9BYQ4 174 aa4.66□□□□□ -1.66
SEH1L-208ENST00000590843 SPRR2DP22532 72 aa4.62□□□□□ -1.67
SEH1L-208ENST00000590843 CSMD1Q96PZ7 3565 aa4.62□□□□□ -1.67
SEH1L-208ENST00000590843 DYNC2H1Q8NCM8 4307 aaKnown RBP4.61□□□□□ -1.67
SEH1L-208ENST00000590843 HERC2O95714 4834 aa4.61□□□□□ -1.67
SEH1L-208ENST00000590843 BSNQ9UPA5 3926 aa4.6□□□□□ -1.67
SEH1L-208ENST00000590843 CSMD2Q7Z408 3487 aa4.59□□□□□ -1.67
SEH1L-208ENST00000590843 CUBNO60494 3623 aa4.59□□□□□ -1.68
SEH1L-208ENST00000590843 LCE3AQ5TA76 89 aa4.59□□□□□ -1.68
SEH1L-208ENST00000590843 RYR3Q15413 4870 aa4.58□□□□□ -1.68
SEH1L-208ENST00000590843 PCLOQ9Y6V0 5065 aa4.58□□□□□ -1.68
SEH1L-208ENST00000590843 VPS13DQ5THJ4 4388 aa4.56□□□□□ -1.68
SEH1L-208ENST00000590843 FAT2Q9NYQ8 4349 aa4.56□□□□□ -1.68
SEH1L-208ENST00000590843 LCE2DQ5TA82 110 aaPredicted RBP4.56□□□□□ -1.68
SEH1L-208ENST00000590843 AKAP9Q99996 3911 aa4.54□□□□□ -1.68
SEH1L-208ENST00000590843 DNAH17Q9UFH2 4485 aa4.54□□□□□ -1.68
SEH1L-208ENST00000590843 SPENQ96T58 3664 aaKnown RBP4.53□□□□□ -1.68
SEH1L-208ENST00000590843 LCE2BO14633 110 aa4.52□□□□□ -1.69
SEH1L-208ENST00000590843 RYR2Q92736 4967 aa4.52□□□□□ -1.69
SEH1L-208ENST00000590843 MYCBP2O75592 4640 aa4.52□□□□□ -1.69
SEH1L-208ENST00000590843 KRTAP10-5P60370 271 aa4.51□□□□□ -1.69
SEH1L-208ENST00000590843 KRTAP19-1Q8IUB9 90 aa4.5□□□□□ -1.69
SEH1L-208ENST00000590843 KRTAP19-8Q3LI54 63 aa4.49□□□□□ -1.69
SEH1L-208ENST00000590843 LCE2CQ5TA81 110 aa4.47□□□□□ -1.69
SEH1L-208ENST00000590843 ANK2Q01484 3957 aa4.46□□□□□ -1.7
SEH1L-208ENST00000590843 SACSQ9NZJ4 4579 aa4.46□□□□□ -1.7
SEH1L-208ENST00000590843 KIAA1109Q2LD37 5005 aa4.42□□□□□ -1.7
SEH1L-208ENST00000590843 DNAH6Q9C0G6 4158 aa4.41□□□□□ -1.7
SEH1L-208ENST00000590843 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
SEH1L-208ENST00000590843 H3BS24 57 aa4.4□□□□□ -1.7
SEH1L-208ENST00000590843 HSPG2P98160 4391 aa4.39□□□□□ -1.71
SEH1L-208ENST00000590843 DNAH8Q96JB1 4490 aa4.38□□□□□ -1.71
SEH1L-208ENST00000590843 DNAH3Q8TD57 4116 aa4.36□□□□□ -1.71
SEH1L-208ENST00000590843 FAT3Q8TDW7 4589 aa4.36□□□□□ -1.71
SEH1L-208ENST00000590843 PKHD1L1Q86WI1 4243 aa4.36□□□□□ -1.71
SEH1L-208ENST00000590843 LRP1Q07954 4544 aaKnown RBP4.34□□□□□ -1.71
SEH1L-208ENST00000590843 KRTAP9-8Q9BYQ0 159 aa4.33□□□□□ -1.72
SEH1L-208ENST00000590843 FAT1Q14517 4588 aa4.31□□□□□ -1.72
SEH1L-208ENST00000590843 PRKDCP78527 4128 aaKnown RBP4.31□□□□□ -1.72
SEH1L-208ENST00000590843 APOBP04114 4563 aaKnown RBP4.31□□□□□ -1.72
SEH1L-208ENST00000590843 KRTAP9-3Q9BYQ3 159 aa4.3□□□□□ -1.72
SEH1L-208ENST00000590843 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
SEH1L-208ENST00000590843 KRTAP20-1Q3LI63 56 aa4.29□□□□□ -1.72
SEH1L-208ENST00000590843 KRTAP19-5Q3LI72 72 aa4.29□□□□□ -1.72
SEH1L-208ENST00000590843 SVEP1Q4LDE5 3571 aa4.29□□□□□ -1.72
SEH1L-208ENST00000590843 STARD9Q9P2P6 4700 aa4.29□□□□□ -1.72
SEH1L-208ENST00000590843 MT1GP13640 62 aa4.26□□□□□ -1.73
SEH1L-208ENST00000590843 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
SEH1L-208ENST00000590843 ZNF469Q96JG9 3925 aaPredicted RBP4.25□□□□□ -1.73
SEH1L-208ENST00000590843 KMT2CQ8NEZ4 4911 aaKnown RBP4.24□□□□□ -1.73
SEH1L-208ENST00000590843 INE1O15225 51 aa4.21□□□□□ -1.74
SEH1L-208ENST00000590843 LCE2AQ5TA79 106 aaPredicted RBP4.2□□□□□ -1.74
SEH1L-208ENST00000590843 MT1BP07438 61 aa4.19□□□□□ -1.74
SEH1L-208ENST00000590843 VPS13CQ709C8 3753 aa4.19□□□□□ -1.74
SEH1L-208ENST00000590843 EPPK1P58107 5090 aaKnown RBP4.16□□□□□ -1.74
SEH1L-208ENST00000590843 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
SEH1L-208ENST00000590843 PKD1P98161 4303 aa4.15□□□□□ -1.74
SEH1L-208ENST00000590843 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
SEH1L-208ENST00000590843 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
SEH1L-208ENST00000590843 MT1XP80297 61 aa4.11□□□□□ -1.75
SEH1L-208ENST00000590843 KRTAP2-3P0C7H8 128 aa4.1□□□□□ -1.75
SEH1L-208ENST00000590843 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
SEH1L-208ENST00000590843 FRAS1Q86XX4 4008 aa4.09□□□□□ -1.75
SEH1L-208ENST00000590843 ABCA13Q86UQ4 5058 aa4.09□□□□□ -1.75
SEH1L-208ENST00000590843 VPS13BQ7Z7G8 4022 aa4.08□□□□□ -1.76
SEH1L-208ENST00000590843 DNAH7Q8WXX0 4024 aa4.07□□□□□ -1.76
SEH1L-208ENST00000590843 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
SEH1L-208ENST00000590843 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.03□□□□□ -1.76
SEH1L-208ENST00000590843 LRP2P98164 4655 aa3.99□□□□□ -1.77
SEH1L-208ENST00000590843 CMYA5Q8N3K9 4069 aa3.98□□□□□ -1.77
SEH1L-208ENST00000590843 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
SEH1L-208ENST00000590843 KRTAP19-2Q3LHN2 52 aa3.96□□□□□ -1.78
SEH1L-208ENST00000590843 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
SEH1L-208ENST00000590843 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
SEH1L-208ENST00000590843 KRTAP2-1Q9BYU5 128 aa3.92□□□□□ -1.78
SEH1L-208ENST00000590843 MT4P47944 62 aa3.9□□□□□ -1.78
SEH1L-208ENST00000590843 KRTAP4-8A0A0G2JLE6 195 aa3.87□□□□□ -1.79
SEH1L-208ENST00000590843 KRTAP4-8Q9BYQ9 185 aa3.87□□□□□ -1.79
SEH1L-208ENST00000590843 KMT2AQ03164 3969 aa3.85□□□□□ -1.79
SEH1L-208ENST00000590843 HYDINQ4G0P3 5121 aa3.84□□□□□ -1.79
SEH1L-208ENST00000590843 UBR4Q5T4S7 5183 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 204.1 ms