RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 KRTAP10-10P60014 251 aa9.07□□□□□ -0.96
DDX39A-214ENST00000590556 MT1FP04733 61 aa9.06□□□□□ -0.96
DDX39A-214ENST00000590556 DMAC1Q96GE9 116 aa9.05□□□□□ -0.96
DDX39A-214ENST00000590556 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
DDX39A-214ENST00000590556 COX7CP15954 63 aa9.02□□□□□ -0.97
DDX39A-214ENST00000590556 NDUFC1O43677 76 aa9.01□□□□□ -0.97
DDX39A-214ENST00000590556 ANAPC13Q9BS18 74 aa8.95□□□□□ -0.98
DDX39A-214ENST00000590556 ACYP2P14621 99 aa8.93□□□□□ -0.98
DDX39A-214ENST00000590556 SPANXA2-OT1Q8N9U9 137 aa8.92□□□□□ -0.98
DDX39A-214ENST00000590556 KRTAP9-3Q9BYQ3 159 aa8.92□□□□□ -0.98
DDX39A-214ENST00000590556 FSIP2Q5CZC0 6907 aa8.82□□□□□ -1
DDX39A-214ENST00000590556 CYSTM1Q9H1C7 97 aa8.8□□□□□ -1
DDX39A-214ENST00000590556 H0YAA0 97 aa8.79□□□□□ -1
DDX39A-214ENST00000590556 CRCT1Q9UGL9 99 aa8.79□□□□□ -1
DDX39A-214ENST00000590556 CHKB-CPT1BH3BT56 60 aa8.78□□□□□ -1
DDX39A-214ENST00000590556 H7BZZ5 65 aa8.78□□□□□ -1
DDX39A-214ENST00000590556 LCE2BO14633 110 aa8.77□□□□□ -1.01
DDX39A-214ENST00000590556 CCDC179H3BU77 68 aa8.75□□□□□ -1.01
DDX39A-214ENST00000590556 SPTSSBQ8NFR3 76 aa8.75□□□□□ -1.01
DDX39A-214ENST00000590556 ADM2Q7Z4H4 148 aa8.73□□□□□ -1.01
DDX39A-214ENST00000590556 USH2AO75445 5202 aa8.71□□□□□ -1.01
DDX39A-214ENST00000590556 KRTAP19-1Q8IUB9 90 aa8.66□□□□□ -1.02
DDX39A-214ENST00000590556 CRIPTQ9P021 101 aa8.66□□□□□ -1.02
DDX39A-214ENST00000590556 COA5Q86WW8 74 aa8.65□□□□□ -1.02
DDX39A-214ENST00000590556 SPRR2GQ9BYE4 73 aa8.62□□□□□ -1.03
DDX39A-214ENST00000590556 P0C880 135 aa8.58□□□□□ -1.04
DDX39A-214ENST00000590556 KRTAP3-2Q9BYR7 98 aa8.57□□□□□ -1.04
DDX39A-214ENST00000590556 SSPOA2VEC9 5147 aa8.52□□□□□ -1.05
DDX39A-214ENST00000590556 ATP5EP56381 51 aaPredicted RBP8.51□□□□□ -1.05
DDX39A-214ENST00000590556 KRTAP19-8Q3LI54 63 aa8.49□□□□□ -1.05
DDX39A-214ENST00000590556 Q5VV11 94 aa8.48□□□□□ -1.05
DDX39A-214ENST00000590556 R4GN34 69 aa8.47□□□□□ -1.05
DDX39A-214ENST00000590556 TMEM258P61165 79 aa8.44□□□□□ -1.06
DDX39A-214ENST00000590556 M0QZ58 72 aa8.43□□□□□ -1.06
DDX39A-214ENST00000590556 MT1BP07438 61 aa8.43□□□□□ -1.06
DDX39A-214ENST00000590556 KRTAP19-6Q3LI70 58 aa8.39□□□□□ -1.07
DDX39A-214ENST00000590556 SEC61GP60059 68 aa8.36□□□□□ -1.07
DDX39A-214ENST00000590556 SERP1Q9Y6X1 66 aa8.33□□□□□ -1.08
DDX39A-214ENST00000590556 FCGBPQ9Y6R7 5405 aaPredicted RBP8.3□□□□□ -1.08
DDX39A-214ENST00000590556 LINC01554Q52M75 96 aa8.29□□□□□ -1.08
DDX39A-214ENST00000590556 PLAC4Q8WY50 150 aa8.24□□□□□ -1.09
DDX39A-214ENST00000590556 KRTAP9-7A8MTY7 169 aa8.22□□□□□ -1.09
DDX39A-214ENST00000590556 PCP4P48539 62 aa8.22□□□□□ -1.09
DDX39A-214ENST00000590556 A0A1B0GU69 56 aa8.21□□□□□ -1.1
DDX39A-214ENST00000590556 A6NN06 94 aa8.19□□□□□ -1.1
DDX39A-214ENST00000590556 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.19□□□□□ -1.1
DDX39A-214ENST00000590556 KRTAP13-4Q3LI77 160 aa8.18□□□□□ -1.1
DDX39A-214ENST00000590556 A0A1B0GU33 70 aa8.16□□□□□ -1.1
DDX39A-214ENST00000590556 KRTAP10-5P60370 271 aa8.15□□□□□ -1.1
DDX39A-214ENST00000590556 PRR15LQ9BU68 103 aa8.1□□□□□ -1.11
DDX39A-214ENST00000590556 LINC01558Q9Y6Z2 57 aa8.1□□□□□ -1.11
DDX39A-214ENST00000590556 SPATA8Q6RVD6 105 aa8.07□□□□□ -1.12
DDX39A-214ENST00000590556 PRO2289Q9P1D8 64 aa8.04□□□□□ -1.12
DDX39A-214ENST00000590556 MT1XP80297 61 aa8.02□□□□□ -1.13
DDX39A-214ENST00000590556 A0A0D9SG42 100 aa8.01□□□□□ -1.13
DDX39A-214ENST00000590556 MACF1Q9UPN3 7388 aaKnown RBP7.95□□□□□ -1.14
DDX39A-214ENST00000590556 SMIM26A0A096LP01 95 aa7.93□□□□□ -1.14
DDX39A-214ENST00000590556 V9GYY9 64 aa7.91□□□□□ -1.14
DDX39A-214ENST00000590556 Q1T7F1 81 aa7.87□□□□□ -1.15
DDX39A-214ENST00000590556 SPINT4Q6UDR6 99 aa7.87□□□□□ -1.15
DDX39A-214ENST00000590556 CAMK2N1Q7Z7J9 78 aa7.87□□□□□ -1.15
DDX39A-214ENST00000590556 A8MU10 97 aa7.86□□□□□ -1.15
DDX39A-214ENST00000590556 RPS28P62857 69 aaKnown RBP7.86□□□□□ -1.15
DDX39A-214ENST00000590556 KRTAP12-1P59990 96 aa7.84□□□□□ -1.15
DDX39A-214ENST00000590556 UQCR11O14957 56 aa7.83□□□□□ -1.16
DDX39A-214ENST00000590556 SYNE2Q8WXH0 6885 aaKnown RBP7.81□□□□□ -1.16
DDX39A-214ENST00000590556 PSPHP1O15172 72 aa7.8□□□□□ -1.16
DDX39A-214ENST00000590556 KRTAP12-2P59991 146 aa7.79□□□□□ -1.16
DDX39A-214ENST00000590556 MIR22HGQ0VDD5 57 aa7.7□□□□□ -1.18
DDX39A-214ENST00000590556 KRTAP6-3Q3LI67 103 aa7.69□□□□□ -1.18
DDX39A-214ENST00000590556 KRTAP10-7P60409 375 aaPredicted RBP7.66□□□□□ -1.18
DDX39A-214ENST00000590556 KRTAP10-12P60413 245 aa7.62□□□□□ -1.19
DDX39A-214ENST00000590556 A6NED7 52 aa7.57□□□□□ -1.2
DDX39A-214ENST00000590556 KMT2DO14686 5537 aa7.57□□□□□ -1.2
DDX39A-214ENST00000590556 KRTAP4-8A0A0G2JLE6 195 aa7.53□□□□□ -1.2
DDX39A-214ENST00000590556 KRTAP8-1Q8IUC2 63 aa7.53□□□□□ -1.2
DDX39A-214ENST00000590556 KRTAP4-8Q9BYQ9 185 aa7.53□□□□□ -1.2
DDX39A-214ENST00000590556 KRTAP5-9P26371 169 aa7.51□□□□□ -1.21
DDX39A-214ENST00000590556 K7ERS5 55 aa7.48□□□□□ -1.21
DDX39A-214ENST00000590556 C10orf95Q9H7T3 257 aa7.46□□□□□ -1.22
DDX39A-214ENST00000590556 SPRR2FQ96RM1 72 aa7.41□□□□□ -1.22
DDX39A-214ENST00000590556 TNP1P09430 55 aa7.36□□□□□ -1.23
DDX39A-214ENST00000590556 MUC12Q9UKN1 5478 aa7.34□□□□□ -1.23
DDX39A-214ENST00000590556 NEBP20929 6669 aa7.34□□□□□ -1.23
DDX39A-214ENST00000590556 CDC42SE1Q9NRR8 79 aa7.31□□□□□ -1.24
DDX39A-214ENST00000590556 MDN1Q9NU22 5596 aa7.25□□□□□ -1.25
DDX39A-214ENST00000590556 SPRR2EP22531 72 aa7.21□□□□□ -1.26
DDX39A-214ENST00000590556 SPRR2BP35325 72 aa7.21□□□□□ -1.26
DDX39A-214ENST00000590556 SPRR2AP35326 72 aa7.21□□□□□ -1.26
DDX39A-214ENST00000590556 KRTAP20-1Q3LI63 56 aa7.2□□□□□ -1.26
DDX39A-214ENST00000590556 KRTAP25-1Q3LHN0 102 aa7.16□□□□□ -1.26
DDX39A-214ENST00000590556 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
DDX39A-214ENST00000590556 KRTAP19-7Q3SYF9 63 aa7.15□□□□□ -1.26
DDX39A-214ENST00000590556 LCE1AQ5T7P2 110 aa7.15□□□□□ -1.26
DDX39A-214ENST00000590556 KRTAP19-5Q3LI72 72 aa7.11□□□□□ -1.27
DDX39A-214ENST00000590556 MT1EP04732 61 aa7.08□□□□□ -1.28
DDX39A-214ENST00000590556 ROMO1P60602 79 aa7.05□□□□□ -1.28
DDX39A-214ENST00000590556 BRK1Q8WUW1 75 aa6.99□□□□□ -1.29
DDX39A-214ENST00000590556 SPRR2DP22532 72 aa6.96□□□□□ -1.3
DDX39A-214ENST00000590556 KRTAP19-3Q7Z4W3 81 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms