RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 DMBT1Q9UGM3 2413 aaPredicted RBP10.15□□□□□ -0.78
MBD3-207ENST00000590550 KRTAP21-3Q3LHN1 58 aa10.14□□□□□ -0.79
MBD3-207ENST00000590550 COX6B2Q6YFQ2 88 aa10.11□□□□□ -0.79
MBD3-207ENST00000590550 NDUFAF8A1L188 74 aa10.1□□□□□ -0.79
MBD3-207ENST00000590550 MYCBP2O75592 4640 aa10.08□□□□□ -0.8
MBD3-207ENST00000590550 TPRXLQ17RH7 258 aa10.06□□□□□ -0.8
MBD3-207ENST00000590550 FAT3Q8TDW7 4589 aa10.04□□□□□ -0.8
MBD3-207ENST00000590550 C10orf95Q9H7T3 257 aa10.04□□□□□ -0.8
MBD3-207ENST00000590550 HSPG2P98160 4391 aa10.03□□□□□ -0.8
MBD3-207ENST00000590550 TNXBP22105 4242 aa10.02□□□□□ -0.8
MBD3-207ENST00000590550 A0A0D9SG42 100 aa10.01□□□□□ -0.81
MBD3-207ENST00000590550 RPL37P61927 97 aaKnown RBP9.94□□□□□ -0.82
MBD3-207ENST00000590550 Q5VSD8 79 aa9.94□□□□□ -0.82
MBD3-207ENST00000590550 KRTAP10-8P60410 259 aa9.91□□□□□ -0.82
MBD3-207ENST00000590550 KRTAP17-1Q9BYP8 105 aa9.9□□□□□ -0.83
MBD3-207ENST00000590550 KRTAP15-1Q3LI76 137 aa9.89□□□□□ -0.83
MBD3-207ENST00000590550 RYR3Q15413 4870 aa9.89□□□□□ -0.83
MBD3-207ENST00000590550 KRTAP13-4Q3LI77 160 aa9.87□□□□□ -0.83
MBD3-207ENST00000590550 KIAA1109Q2LD37 5005 aa9.83□□□□□ -0.84
MBD3-207ENST00000590550 XP32Q5T750 250 aa9.83□□□□□ -0.84
MBD3-207ENST00000590550 KRTAP3-3Q9BYR6 98 aa9.8□□□□□ -0.84
MBD3-207ENST00000590550 RYR1P21817 5038 aa9.8□□□□□ -0.84
MBD3-207ENST00000590550 KRTAP10-6P60371 365 aaPredicted RBP9.76□□□□□ -0.85
MBD3-207ENST00000590550 LPAP08519 4548 aa9.75□□□□□ -0.85
MBD3-207ENST00000590550 S4R3F8 94 aa9.67□□□□□ -0.86
MBD3-207ENST00000590550 A0A0A0MQY5 61 aa9.67□□□□□ -0.86
MBD3-207ENST00000590550 MT1HL1P0DM35 61 aa9.65□□□□□ -0.86
MBD3-207ENST00000590550 LRP2P98164 4655 aa9.65□□□□□ -0.86
MBD3-207ENST00000590550 KRTAP3-2Q9BYR7 98 aa9.65□□□□□ -0.86
MBD3-207ENST00000590550 KRTAP12-2P59991 146 aa9.61□□□□□ -0.87
MBD3-207ENST00000590550 EPPK1P58107 5090 aaKnown RBP9.56□□□□□ -0.88
MBD3-207ENST00000590550 ABCA13Q86UQ4 5058 aa9.52□□□□□ -0.88
MBD3-207ENST00000590550 KRTAP12-1P59990 96 aa9.42□□□□□ -0.9
MBD3-207ENST00000590550 KRTAP4-5Q9BYR2 181 aa9.37□□□□□ -0.91
MBD3-207ENST00000590550 LUZP6Q538Z0 58 aa9.35□□□□□ -0.91
MBD3-207ENST00000590550 PLAC4Q8WY50 150 aa9.17□□□□□ -0.94
MBD3-207ENST00000590550 M0QZ58 72 aa9.1□□□□□ -0.95
MBD3-207ENST00000590550 KRTAP4-1Q9BYQ7 146 aa9.08□□□□□ -0.96
MBD3-207ENST00000590550 MUC17Q685J3 4493 aa9.06□□□□□ -0.96
MBD3-207ENST00000590550 MUC2Q02817 5179 aa9.03□□□□□ -0.96
MBD3-207ENST00000590550 LORP23490 312 aaPredicted RBP9.02□□□□□ -0.96
MBD3-207ENST00000590550 R4GN34 69 aa9.02□□□□□ -0.97
MBD3-207ENST00000590550 HERC2O95714 4834 aa9□□□□□ -0.97
MBD3-207ENST00000590550 SEC61BP60468 96 aaKnown RBP9□□□□□ -0.97
MBD3-207ENST00000590550 J3QL48 77 aa8.96□□□□□ -0.97
MBD3-207ENST00000590550 KRTAP19-2Q3LHN2 52 aa8.81□□□□□ -1
MBD3-207ENST00000590550 HERC1Q15751 4861 aa8.68□□□□□ -1.02
MBD3-207ENST00000590550 PCLOQ9Y6V0 5065 aa8.61□□□□□ -1.03
MBD3-207ENST00000590550 BIRC6Q9NR09 4857 aa8.6□□□□□ -1.03
MBD3-207ENST00000590550 FLGP20930 4061 aaPredicted RBP8.59□□□□□ -1.03
MBD3-207ENST00000590550 CAMK2N1Q7Z7J9 78 aa8.58□□□□□ -1.04
MBD3-207ENST00000590550 FAT4Q6V0I7 4981 aa8.58□□□□□ -1.04
MBD3-207ENST00000590550 PP632Q6XCG6 107 aa8.56□□□□□ -1.04
MBD3-207ENST00000590550 HMCN2Q8NDA2 5059 aa8.46□□□□□ -1.05
MBD3-207ENST00000590550 RNF213Q63HN8 5207 aa8.37□□□□□ -1.07
MBD3-207ENST00000590550 LCE2CQ5TA81 110 aa8.3□□□□□ -1.08
MBD3-207ENST00000590550 UBR4Q5T4S7 5183 aa8.29□□□□□ -1.08
MBD3-207ENST00000590550 SPRR5A0A1B0GTR4 108 aa8.25□□□□□ -1.09
MBD3-207ENST00000590550 TNP1P09430 55 aa8.2□□□□□ -1.1
MBD3-207ENST00000590550 M0R2T5 61 aa8.2□□□□□ -1.1
MBD3-207ENST00000590550 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
MBD3-207ENST00000590550 PRO2289Q9P1D8 64 aa8.11□□□□□ -1.11
MBD3-207ENST00000590550 MT1HP80294 61 aa8.08□□□□□ -1.12
MBD3-207ENST00000590550 SPRR2GQ9BYE4 73 aa8.07□□□□□ -1.12
MBD3-207ENST00000590550 MT1FP04733 61 aa8□□□□□ -1.13
MBD3-207ENST00000590550 KRTAP10-10P60014 251 aa7.99□□□□□ -1.13
MBD3-207ENST00000590550 KRTAP23-1A1A580 65 aa7.96□□□□□ -1.13
MBD3-207ENST00000590550 MT2AP02795 61 aa7.96□□□□□ -1.13
MBD3-207ENST00000590550 KRTAP9-8Q9BYQ0 159 aa7.89□□□□□ -1.15
MBD3-207ENST00000590550 LCE3AQ5TA76 89 aa7.84□□□□□ -1.15
MBD3-207ENST00000590550 INE1O15225 51 aa7.82□□□□□ -1.16
MBD3-207ENST00000590550 MT1BP07438 61 aa7.7□□□□□ -1.18
MBD3-207ENST00000590550 KRTAP19-8Q3LI54 63 aa7.69□□□□□ -1.18
MBD3-207ENST00000590550 KRTAP10-5P60370 271 aa7.66□□□□□ -1.18
MBD3-207ENST00000590550 MT1XP80297 61 aa7.65□□□□□ -1.18
MBD3-207ENST00000590550 KRTAP9-3Q9BYQ3 159 aa7.54□□□□□ -1.2
MBD3-207ENST00000590550 KRTAP8-1Q8IUC2 63 aa7.53□□□□□ -1.2
MBD3-207ENST00000590550 USH2AO75445 5202 aa7.51□□□□□ -1.21
MBD3-207ENST00000590550 KRTAP10-7P60409 375 aaPredicted RBP7.5□□□□□ -1.21
MBD3-207ENST00000590550 KRTAP10-12P60413 245 aa7.48□□□□□ -1.21
MBD3-207ENST00000590550 KRTAP12-3P60328 96 aa7.42□□□□□ -1.22
MBD3-207ENST00000590550 KMT2DO14686 5537 aa7.36□□□□□ -1.23
MBD3-207ENST00000590550 LCE2BO14633 110 aa7.31□□□□□ -1.24
MBD3-207ENST00000590550 KRTAP19-5Q3LI72 72 aa7.16□□□□□ -1.26
MBD3-207ENST00000590550 KRTAP4-8A0A0G2JLE6 195 aa7.11□□□□□ -1.27
MBD3-207ENST00000590550 KRTAP4-8Q9BYQ9 185 aa7.11□□□□□ -1.27
MBD3-207ENST00000590550 LCE2AQ5TA79 106 aaPredicted RBP7.07□□□□□ -1.28
MBD3-207ENST00000590550 LCE3CQ5T5A8 94 aa6.97□□□□□ -1.29
MBD3-207ENST00000590550 FSIP2Q5CZC0 6907 aa6.88□□□□□ -1.31
MBD3-207ENST00000590550 KRTAP4-7Q9BYR0 210 aa6.85□□□□□ -1.31
MBD3-207ENST00000590550 KRTAP9-6A8MVA2 160 aa6.83□□□□□ -1.32
MBD3-207ENST00000590550 KRTAP19-7Q3SYF9 63 aa6.82□□□□□ -1.32
MBD3-207ENST00000590550 SSPOA2VEC9 5147 aa6.76□□□□□ -1.33
MBD3-207ENST00000590550 KRTAP2-3P0C7H8 128 aa6.64□□□□□ -1.35
MBD3-207ENST00000590550 KRTAP2-4Q9BYR9 128 aa6.64□□□□□ -1.35
MBD3-207ENST00000590550 KRTAP2-1Q9BYU5 128 aa6.64□□□□□ -1.35
MBD3-207ENST00000590550 MT1LQ93083 61 aa6.6□□□□□ -1.35
MBD3-207ENST00000590550 MT1EP04732 61 aa6.59□□□□□ -1.35
MBD3-207ENST00000590550 FCGBPQ9Y6R7 5405 aaPredicted RBP6.49□□□□□ -1.37
MBD3-207ENST00000590550 MUC12Q9UKN1 5478 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms