RNA–Protein interactions for RNA: ENST00000590523.1

LINC00662-206, long intergenic non-protein coding RNA 662, humanhuman

TSL 1 (best) BASIC

Gene LINC00662, Length 2,053 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-206ENST00000590523 A0A1B0GU33 70 aa6.88□□□□□ -1.31
LINC00662-206ENST00000590523 DYNC1H1Q14204 4646 aaKnown RBP6.87□□□□□ -1.31
LINC00662-206ENST00000590523 SMR3BP02814 79 aaPredicted RBP6.86□□□□□ -1.31
LINC00662-206ENST00000590523 H1FX-AS1Q4G0G2 97 aa6.85□□□□□ -1.31
LINC00662-206ENST00000590523 K7ERS5 55 aa6.84□□□□□ -1.31
LINC00662-206ENST00000590523 KRTAP10-4P60372 401 aaPredicted RBP6.84□□□□□ -1.31
LINC00662-206ENST00000590523 APOBP04114 4563 aaKnown RBP6.83□□□□□ -1.32
LINC00662-206ENST00000590523 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
LINC00662-206ENST00000590523 COX6B2Q6YFQ2 88 aa6.78□□□□□ -1.32
LINC00662-206ENST00000590523 KRTAP17-1Q9BYP8 105 aa6.77□□□□□ -1.33
LINC00662-206ENST00000590523 FAT1Q14517 4588 aa6.73□□□□□ -1.33
LINC00662-206ENST00000590523 HERC2O95714 4834 aa6.71□□□□□ -1.34
LINC00662-206ENST00000590523 FLG2Q5D862 2391 aaPredicted RBP6.68□□□□□ -1.34
LINC00662-206ENST00000590523 XP32Q5T750 250 aa6.67□□□□□ -1.34
LINC00662-206ENST00000590523 HSPG2P98160 4391 aa6.66□□□□□ -1.34
LINC00662-206ENST00000590523 P0C880 135 aa6.66□□□□□ -1.34
LINC00662-206ENST00000590523 A0A0A0MQY5 61 aa6.65□□□□□ -1.34
LINC00662-206ENST00000590523 Q5VSD8 79 aa6.64□□□□□ -1.35
LINC00662-206ENST00000590523 KRTAP10-8P60410 259 aa6.62□□□□□ -1.35
LINC00662-206ENST00000590523 RYR1P21817 5038 aa6.62□□□□□ -1.35
LINC00662-206ENST00000590523 KIAA1109Q2LD37 5005 aa6.62□□□□□ -1.35
LINC00662-206ENST00000590523 RPL37P61927 97 aaKnown RBP6.62□□□□□ -1.35
LINC00662-206ENST00000590523 FAT3Q8TDW7 4589 aa6.6□□□□□ -1.35
LINC00662-206ENST00000590523 TNXBP22105 4242 aa6.59□□□□□ -1.36
LINC00662-206ENST00000590523 PCLOQ9Y6V0 5065 aa6.57□□□□□ -1.36
LINC00662-206ENST00000590523 CRIPTQ9P021 101 aa6.57□□□□□ -1.36
LINC00662-206ENST00000590523 SPINT4Q6UDR6 99 aa6.53□□□□□ -1.36
LINC00662-206ENST00000590523 S4R3F8 94 aa6.53□□□□□ -1.36
LINC00662-206ENST00000590523 KRTAP10-6P60371 365 aaPredicted RBP6.52□□□□□ -1.37
LINC00662-206ENST00000590523 TPRXLQ17RH7 258 aa6.49□□□□□ -1.37
LINC00662-206ENST00000590523 LRP1Q07954 4544 aaKnown RBP6.47□□□□□ -1.37
LINC00662-206ENST00000590523 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.37
LINC00662-206ENST00000590523 DMBT1Q9UGM3 2413 aaPredicted RBP6.46□□□□□ -1.38
LINC00662-206ENST00000590523 ABCA13Q86UQ4 5058 aa6.44□□□□□ -1.38
LINC00662-206ENST00000590523 MYCBP2O75592 4640 aa6.44□□□□□ -1.38
LINC00662-206ENST00000590523 KRTAP4-5Q9BYR2 181 aa6.43□□□□□ -1.38
LINC00662-206ENST00000590523 KRTAP13-4Q3LI77 160 aa6.42□□□□□ -1.38
LINC00662-206ENST00000590523 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
LINC00662-206ENST00000590523 A0A0D9SG42 100 aa6.38□□□□□ -1.39
LINC00662-206ENST00000590523 NDUFAF8A1L188 74 aa6.37□□□□□ -1.39
LINC00662-206ENST00000590523 MT1HL1P0DM35 61 aa6.35□□□□□ -1.39
LINC00662-206ENST00000590523 C10orf95Q9H7T3 257 aa6.34□□□□□ -1.4
LINC00662-206ENST00000590523 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
LINC00662-206ENST00000590523 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.3□□□□□ -1.4
LINC00662-206ENST00000590523 M0QZ58 72 aa6.29□□□□□ -1.4
LINC00662-206ENST00000590523 KRTAP9-6A0A140TA67 174 aa6.27□□□□□ -1.41
LINC00662-206ENST00000590523 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
LINC00662-206ENST00000590523 KRTAP12-1P59990 96 aa6.24□□□□□ -1.41
LINC00662-206ENST00000590523 KRTAP4-12Q9BQ66 201 aa6.19□□□□□ -1.42
LINC00662-206ENST00000590523 HERC1Q15751 4861 aa6.17□□□□□ -1.42
LINC00662-206ENST00000590523 KRTAP19-1Q8IUB9 90 aa6.13□□□□□ -1.43
LINC00662-206ENST00000590523 LRP2P98164 4655 aa6.12□□□□□ -1.43
LINC00662-206ENST00000590523 SEC61BP60468 96 aaKnown RBP6.1□□□□□ -1.43
LINC00662-206ENST00000590523 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
LINC00662-206ENST00000590523 LPAP08519 4548 aa6.07□□□□□ -1.44
LINC00662-206ENST00000590523 R4GN34 69 aa6.06□□□□□ -1.44
LINC00662-206ENST00000590523 KRTAP9-9Q9BYP9 154 aa6□□□□□ -1.45
LINC00662-206ENST00000590523 KRTAP9-4Q9BYQ2 154 aa6□□□□□ -1.45
LINC00662-206ENST00000590523 PLAC4Q8WY50 150 aa5.99□□□□□ -1.45
LINC00662-206ENST00000590523 LUZP6Q538Z0 58 aa5.96□□□□□ -1.46
LINC00662-206ENST00000590523 MUC17Q685J3 4493 aa5.94□□□□□ -1.46
LINC00662-206ENST00000590523 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
LINC00662-206ENST00000590523 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
LINC00662-206ENST00000590523 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
LINC00662-206ENST00000590523 KRTAP4-1Q9BYQ7 146 aa5.86□□□□□ -1.47
LINC00662-206ENST00000590523 UBR4Q5T4S7 5183 aa5.83□□□□□ -1.48
LINC00662-206ENST00000590523 KRTAP19-2Q3LHN2 52 aa5.82□□□□□ -1.48
LINC00662-206ENST00000590523 MUC2Q02817 5179 aa5.77□□□□□ -1.49
LINC00662-206ENST00000590523 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
LINC00662-206ENST00000590523 FLGP20930 4061 aaPredicted RBP5.73□□□□□ -1.49
LINC00662-206ENST00000590523 LCE1DQ5T752 114 aa5.71□□□□□ -1.49
LINC00662-206ENST00000590523 LCE4AQ5TA78 99 aa5.7□□□□□ -1.5
LINC00662-206ENST00000590523 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
LINC00662-206ENST00000590523 RNF213Q63HN8 5207 aa5.65□□□□□ -1.51
LINC00662-206ENST00000590523 KRTAP4-7Q9BYR0 210 aa5.64□□□□□ -1.51
LINC00662-206ENST00000590523 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
LINC00662-206ENST00000590523 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
LINC00662-206ENST00000590523 KRTAP9-7A8MTY7 169 aa5.59□□□□□ -1.51
LINC00662-206ENST00000590523 TNP1P09430 55 aa5.59□□□□□ -1.52
LINC00662-206ENST00000590523 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
LINC00662-206ENST00000590523 FAT4Q6V0I7 4981 aa5.48□□□□□ -1.53
LINC00662-206ENST00000590523 SPRR2GQ9BYE4 73 aa5.46□□□□□ -1.53
LINC00662-206ENST00000590523 KRTAP4-2Q9BYR5 136 aa5.41□□□□□ -1.54
LINC00662-206ENST00000590523 M0R2T5 61 aa5.38□□□□□ -1.55
LINC00662-206ENST00000590523 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
LINC00662-206ENST00000590523 PRO2289Q9P1D8 64 aa5.36□□□□□ -1.55
LINC00662-206ENST00000590523 KRTAP9-3Q9BYQ3 159 aa5.36□□□□□ -1.55
LINC00662-206ENST00000590523 MT1HP80294 61 aa5.35□□□□□ -1.55
LINC00662-206ENST00000590523 LCE5AQ5TCM9 118 aa5.34□□□□□ -1.55
LINC00662-206ENST00000590523 INE1O15225 51 aa5.29□□□□□ -1.56
LINC00662-206ENST00000590523 KRTAP10-10P60014 251 aa5.24□□□□□ -1.57
LINC00662-206ENST00000590523 MT2AP02795 61 aa5.24□□□□□ -1.57
LINC00662-206ENST00000590523 MT1FP04733 61 aa5.21□□□□□ -1.58
LINC00662-206ENST00000590523 KRTAP19-8Q3LI54 63 aa5.21□□□□□ -1.58
LINC00662-206ENST00000590523 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
LINC00662-206ENST00000590523 KRTAP9-8Q9BYQ0 159 aa5.19□□□□□ -1.58
LINC00662-206ENST00000590523 KRTAP8-1Q8IUC2 63 aa5.14□□□□□ -1.59
LINC00662-206ENST00000590523 MT1BP07438 61 aa5.08□□□□□ -1.6
LINC00662-206ENST00000590523 KRTAP10-5P60370 271 aa5.06□□□□□ -1.6
LINC00662-206ENST00000590523 MT1XP80297 61 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms