RNA–Protein interactions for RNA: ENST00000590060.5

POLR2E-207, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5

Gene POLR2E, Length 1,052 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-207ENST00000590060 Q1T7F1 81 aa9.58□□□□□ -0.88
POLR2E-207ENST00000590060 LCA10Q71F78 164 aa9.57□□□□□ -0.88
POLR2E-207ENST00000590060 LINC01558Q9Y6Z2 57 aa9.53□□□□□ -0.88
POLR2E-207ENST00000590060 PRR15LQ9BU68 103 aa9.51□□□□□ -0.89
POLR2E-207ENST00000590060 SEC61GP60059 68 aa9.5□□□□□ -0.89
POLR2E-207ENST00000590060 CSAG1Q6PB30 78 aa9.48□□□□□ -0.89
POLR2E-207ENST00000590060 A0A1B0GU69 56 aa9.46□□□□□ -0.9
POLR2E-207ENST00000590060 UBR4Q5T4S7 5183 aa9.44□□□□□ -0.9
POLR2E-207ENST00000590060 KRTAP3-3Q9BYR6 98 aa9.44□□□□□ -0.9
POLR2E-207ENST00000590060 RNF213Q63HN8 5207 aa9.44□□□□□ -0.9
POLR2E-207ENST00000590060 KRTAP19-2Q3LHN2 52 aa9.43□□□□□ -0.9
POLR2E-207ENST00000590060 PSPHP1O15172 72 aa9.39□□□□□ -0.91
POLR2E-207ENST00000590060 MUC2Q02817 5179 aa9.35□□□□□ -0.91
POLR2E-207ENST00000590060 Q5VV11 94 aa9.29□□□□□ -0.92
POLR2E-207ENST00000590060 FLGP20930 4061 aaPredicted RBP9.26□□□□□ -0.93
POLR2E-207ENST00000590060 LCE2CQ5TA81 110 aa9.26□□□□□ -0.93
POLR2E-207ENST00000590060 H0YAA0 97 aa9.25□□□□□ -0.93
POLR2E-207ENST00000590060 M0R2T5 61 aa9.21□□□□□ -0.94
POLR2E-207ENST00000590060 ADM2Q7Z4H4 148 aa9.21□□□□□ -0.94
POLR2E-207ENST00000590060 A6NED7 52 aa9.19□□□□□ -0.94
POLR2E-207ENST00000590060 UQCR11O14957 56 aa9.16□□□□□ -0.94
POLR2E-207ENST00000590060 MT1HP80294 61 aa9.16□□□□□ -0.94
POLR2E-207ENST00000590060 A0A1B0GU33 70 aa9.14□□□□□ -0.95
POLR2E-207ENST00000590060 FAT4Q6V0I7 4981 aa9.13□□□□□ -0.95
POLR2E-207ENST00000590060 KRTAP10-6P60371 365 aaPredicted RBP9.1□□□□□ -0.95
POLR2E-207ENST00000590060 KRTAP3-2Q9BYR7 98 aa9.1□□□□□ -0.95
POLR2E-207ENST00000590060 P0C880 135 aa9.06□□□□□ -0.96
POLR2E-207ENST00000590060 MIR22HGQ0VDD5 57 aa9.04□□□□□ -0.96
POLR2E-207ENST00000590060 BRK1Q8WUW1 75 aa9.03□□□□□ -0.96
POLR2E-207ENST00000590060 CDC42SE1Q9NRR8 79 aa9□□□□□ -0.97
POLR2E-207ENST00000590060 M0QZ58 72 aa8.97□□□□□ -0.97
POLR2E-207ENST00000590060 SPATA8Q6RVD6 105 aa8.95□□□□□ -0.98
POLR2E-207ENST00000590060 R4GN34 69 aa8.94□□□□□ -0.98
POLR2E-207ENST00000590060 CRIPTQ9P021 101 aa8.93□□□□□ -0.98
POLR2E-207ENST00000590060 KRTAP13-4Q3LI77 160 aa8.82□□□□□ -1
POLR2E-207ENST00000590060 PRO0628Q9UI54 55 aa8.8□□□□□ -1
POLR2E-207ENST00000590060 LCE2AQ5TA79 106 aaPredicted RBP8.79□□□□□ -1
POLR2E-207ENST00000590060 K7ERS5 55 aa8.78□□□□□ -1
POLR2E-207ENST00000590060 MT2AP02795 61 aa8.78□□□□□ -1
POLR2E-207ENST00000590060 KRTAP10-10P60014 251 aa8.78□□□□□ -1
POLR2E-207ENST00000590060 A0A0D9SG42 100 aa8.77□□□□□ -1.01
POLR2E-207ENST00000590060 A8MU10 97 aa8.76□□□□□ -1.01
POLR2E-207ENST00000590060 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
POLR2E-207ENST00000590060 KRTAP9-8Q9BYQ0 159 aa8.76□□□□□ -1.01
POLR2E-207ENST00000590060 LINC01554Q52M75 96 aa8.73□□□□□ -1.01
POLR2E-207ENST00000590060 MT1FP04733 61 aa8.71□□□□□ -1.02
POLR2E-207ENST00000590060 A6NN06 94 aa8.61□□□□□ -1.03
POLR2E-207ENST00000590060 SPINT4Q6UDR6 99 aa8.61□□□□□ -1.03
POLR2E-207ENST00000590060 SPRR2GQ9BYE4 73 aa8.61□□□□□ -1.03
POLR2E-207ENST00000590060 KRTAP12-1P59990 96 aa8.55□□□□□ -1.04
POLR2E-207ENST00000590060 PMAIP1Q13794 54 aa8.53□□□□□ -1.04
POLR2E-207ENST00000590060 KRTAP19-1Q8IUB9 90 aa8.52□□□□□ -1.05
POLR2E-207ENST00000590060 KRTAP12-2P59991 146 aa8.51□□□□□ -1.05
POLR2E-207ENST00000590060 KRTAP9-3Q9BYQ3 159 aa8.46□□□□□ -1.06
POLR2E-207ENST00000590060 PLAC4Q8WY50 150 aa8.45□□□□□ -1.06
POLR2E-207ENST00000590060 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
POLR2E-207ENST00000590060 KRTAP19-8Q3LI54 63 aa8.39□□□□□ -1.07
POLR2E-207ENST00000590060 ROMO1P60602 79 aa8.28□□□□□ -1.08
POLR2E-207ENST00000590060 MT1BP07438 61 aa8.23□□□□□ -1.09
POLR2E-207ENST00000590060 LCE2BO14633 110 aa8.2□□□□□ -1.1
POLR2E-207ENST00000590060 KTN1-AS1Q86SY8 53 aa8.19□□□□□ -1.1
POLR2E-207ENST00000590060 PRO2289Q9P1D8 64 aa8.09□□□□□ -1.11
POLR2E-207ENST00000590060 LCE2DQ5TA82 110 aaPredicted RBP8.08□□□□□ -1.12
POLR2E-207ENST00000590060 C10orf95Q9H7T3 257 aa8.06□□□□□ -1.12
POLR2E-207ENST00000590060 KRTAP25-1Q3LHN0 102 aa7.99□□□□□ -1.13
POLR2E-207ENST00000590060 TNP1P09430 55 aa7.98□□□□□ -1.13
POLR2E-207ENST00000590060 USH2AO75445 5202 aa7.97□□□□□ -1.13
POLR2E-207ENST00000590060 MT1XP80297 61 aa7.96□□□□□ -1.14
POLR2E-207ENST00000590060 KRTAP10-5P60370 271 aa7.94□□□□□ -1.14
POLR2E-207ENST00000590060 PRAC1Q96KF2 57 aa7.91□□□□□ -1.14
POLR2E-207ENST00000590060 SVIPQ8NHG7 77 aa7.85□□□□□ -1.15
POLR2E-207ENST00000590060 KRTAP19-6Q3LI70 58 aa7.8□□□□□ -1.16
POLR2E-207ENST00000590060 PP632Q6XCG6 107 aa7.76□□□□□ -1.17
POLR2E-207ENST00000590060 KRTAP9-2Q9BYQ4 174 aa7.75□□□□□ -1.17
POLR2E-207ENST00000590060 SSPOA2VEC9 5147 aa7.73□□□□□ -1.17
POLR2E-207ENST00000590060 KRTAP23-1A1A580 65 aa7.7□□□□□ -1.18
POLR2E-207ENST00000590060 KRTAP10-12P60413 245 aa7.66□□□□□ -1.18
POLR2E-207ENST00000590060 KRTAP10-7P60409 375 aaPredicted RBP7.62□□□□□ -1.19
POLR2E-207ENST00000590060 FSIP2Q5CZC0 6907 aa7.6□□□□□ -1.19
POLR2E-207ENST00000590060 LCE3AQ5TA76 89 aa7.54□□□□□ -1.2
POLR2E-207ENST00000590060 CRCT1Q9UGL9 99 aa7.5□□□□□ -1.21
POLR2E-207ENST00000590060 FCGBPQ9Y6R7 5405 aaPredicted RBP7.39□□□□□ -1.23
POLR2E-207ENST00000590060 KRTAP8-1Q8IUC2 63 aa7.39□□□□□ -1.23
POLR2E-207ENST00000590060 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
POLR2E-207ENST00000590060 KRTAP12-3P60328 96 aa7.28□□□□□ -1.24
POLR2E-207ENST00000590060 KRTAP4-8Q9BYQ9 185 aa7.28□□□□□ -1.24
POLR2E-207ENST00000590060 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
POLR2E-207ENST00000590060 KRTAP19-5Q3LI72 72 aa7.2□□□□□ -1.26
POLR2E-207ENST00000590060 KMT2DO14686 5537 aa7.2□□□□□ -1.26
POLR2E-207ENST00000590060 MACF1Q9UPN3 7388 aaKnown RBP7.15□□□□□ -1.26
POLR2E-207ENST00000590060 KRTAP15-1Q3LI76 137 aa7.12□□□□□ -1.27
POLR2E-207ENST00000590060 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
POLR2E-207ENST00000590060 MT1EP04732 61 aa7.01□□□□□ -1.29
POLR2E-207ENST00000590060 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
POLR2E-207ENST00000590060 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
POLR2E-207ENST00000590060 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
POLR2E-207ENST00000590060 SYNE2Q8WXH0 6885 aaKnown RBP6.87□□□□□ -1.31
POLR2E-207ENST00000590060 MT1LQ93083 61 aa6.86□□□□□ -1.31
POLR2E-207ENST00000590060 KRTAP5-9P26371 169 aa6.85□□□□□ -1.31
POLR2E-207ENST00000590060 KRTAP6-3Q3LI67 103 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms