RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 KRTAP9-7A8MTY7 169 aa7.07□□□□□ -1.28
ERCC1-209ENST00000589214 LINC00208Q96KT6 92 aa7.07□□□□□ -1.28
ERCC1-209ENST00000589214 MP68P56378 58 aa7.06□□□□□ -1.28
ERCC1-209ENST00000589214 CSAG1Q6PB30 78 aa7.05□□□□□ -1.28
ERCC1-209ENST00000589214 SMIM20Q8N5G0 67 aa7.04□□□□□ -1.28
ERCC1-209ENST00000589214 H3BPC8 53 aa7.03□□□□□ -1.28
ERCC1-209ENST00000589214 KLKP1Q107X0 134 aa7.03□□□□□ -1.28
ERCC1-209ENST00000589214 KRTAP19-6Q3LI70 58 aa7.03□□□□□ -1.28
ERCC1-209ENST00000589214 KRTAP3-3Q9BYR6 98 aa7.02□□□□□ -1.29
ERCC1-209ENST00000589214 TRAV7A0A075B6U4 112 aa7.01□□□□□ -1.29
ERCC1-209ENST00000589214 MACF1Q9UPN3 7388 aaKnown RBP6.91□□□□□ -1.3
ERCC1-209ENST00000589214 SERP2Q8N6R1 65 aa6.9□□□□□ -1.3
ERCC1-209ENST00000589214 A8MUN3 132 aa6.89□□□□□ -1.31
ERCC1-209ENST00000589214 NDUFC1O43677 76 aa6.88□□□□□ -1.31
ERCC1-209ENST00000589214 SPRR2GQ9BYE4 73 aa6.83□□□□□ -1.32
ERCC1-209ENST00000589214 MT1BP07438 61 aa6.82□□□□□ -1.32
ERCC1-209ENST00000589214 Q5VV11 94 aa6.82□□□□□ -1.32
ERCC1-209ENST00000589214 SNURFQ9Y675 71 aa6.82□□□□□ -1.32
ERCC1-209ENST00000589214 SYNE2Q8WXH0 6885 aaKnown RBP6.82□□□□□ -1.32
ERCC1-209ENST00000589214 C20orf197Q8N268 126 aa6.81□□□□□ -1.32
ERCC1-209ENST00000589214 DMAC1Q96GE9 116 aa6.8□□□□□ -1.32
ERCC1-209ENST00000589214 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
ERCC1-209ENST00000589214 COX7CP15954 63 aa6.78□□□□□ -1.32
ERCC1-209ENST00000589214 ADM2Q7Z4H4 148 aa6.75□□□□□ -1.33
ERCC1-209ENST00000589214 A6NN06 94 aa6.74□□□□□ -1.33
ERCC1-209ENST00000589214 H0YAA0 97 aa6.73□□□□□ -1.33
ERCC1-209ENST00000589214 SPANXA2-OT1Q8N9U9 137 aa6.71□□□□□ -1.34
ERCC1-209ENST00000589214 CRIPTQ9P021 101 aa6.71□□□□□ -1.34
ERCC1-209ENST00000589214 ANAPC13Q9BS18 74 aa6.7□□□□□ -1.34
ERCC1-209ENST00000589214 ACYP2P14621 99 aa6.69□□□□□ -1.34
ERCC1-209ENST00000589214 KRTAP6-3Q3LI67 103 aa6.67□□□□□ -1.34
ERCC1-209ENST00000589214 KRTAP10-5P60370 271 aa6.65□□□□□ -1.34
ERCC1-209ENST00000589214 CYSTM1Q9H1C7 97 aa6.64□□□□□ -1.35
ERCC1-209ENST00000589214 P0C880 135 aa6.63□□□□□ -1.35
ERCC1-209ENST00000589214 H7BZZ5 65 aa6.62□□□□□ -1.35
ERCC1-209ENST00000589214 CCDC179H3BU77 68 aa6.58□□□□□ -1.36
ERCC1-209ENST00000589214 KRTAP3-2Q9BYR7 98 aa6.58□□□□□ -1.36
ERCC1-209ENST00000589214 CHKB-CPT1BH3BT56 60 aa6.55□□□□□ -1.36
ERCC1-209ENST00000589214 R4GN34 69 aa6.54□□□□□ -1.36
ERCC1-209ENST00000589214 SPTSSBQ8NFR3 76 aa6.53□□□□□ -1.36
ERCC1-209ENST00000589214 M0QZ58 72 aa6.51□□□□□ -1.37
ERCC1-209ENST00000589214 COA5Q86WW8 74 aa6.49□□□□□ -1.37
ERCC1-209ENST00000589214 NEBP20929 6669 aa6.44□□□□□ -1.38
ERCC1-209ENST00000589214 LINC01554Q52M75 96 aa6.44□□□□□ -1.38
ERCC1-209ENST00000589214 PLAC4Q8WY50 150 aa6.43□□□□□ -1.38
ERCC1-209ENST00000589214 PRO2289Q9P1D8 64 aa6.4□□□□□ -1.38
ERCC1-209ENST00000589214 ATP5EP56381 51 aaPredicted RBP6.39□□□□□ -1.39
ERCC1-209ENST00000589214 MT1XP80297 61 aa6.39□□□□□ -1.39
ERCC1-209ENST00000589214 KRTAP5-9P26371 169 aa6.37□□□□□ -1.39
ERCC1-209ENST00000589214 MUC12Q9UKN1 5478 aa6.36□□□□□ -1.39
ERCC1-209ENST00000589214 TMEM258P61165 79 aa6.35□□□□□ -1.39
ERCC1-209ENST00000589214 KMT2DO14686 5537 aa6.27□□□□□ -1.41
ERCC1-209ENST00000589214 KRTAP13-4Q3LI77 160 aa6.26□□□□□ -1.41
ERCC1-209ENST00000589214 KRTAP12-2P59991 146 aa6.22□□□□□ -1.41
ERCC1-209ENST00000589214 SEC61GP60059 68 aa6.22□□□□□ -1.41
ERCC1-209ENST00000589214 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
ERCC1-209ENST00000589214 SERP1Q9Y6X1 66 aa6.21□□□□□ -1.42
ERCC1-209ENST00000589214 KRTAP20-1Q3LI63 56 aa6.2□□□□□ -1.42
ERCC1-209ENST00000589214 KRTAP8-1Q8IUC2 63 aa6.2□□□□□ -1.42
ERCC1-209ENST00000589214 MDN1Q9NU22 5596 aa6.17□□□□□ -1.42
ERCC1-209ENST00000589214 PCP4P48539 62 aa6.17□□□□□ -1.42
ERCC1-209ENST00000589214 SPRR2EP22531 72 aa6.14□□□□□ -1.43
ERCC1-209ENST00000589214 SPRR2BP35325 72 aa6.14□□□□□ -1.43
ERCC1-209ENST00000589214 SPRR2AP35326 72 aa6.14□□□□□ -1.43
ERCC1-209ENST00000589214 A0A1B0GU69 56 aa6.13□□□□□ -1.43
ERCC1-209ENST00000589214 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
ERCC1-209ENST00000589214 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
ERCC1-209ENST00000589214 A0A1B0GU33 70 aa6.11□□□□□ -1.43
ERCC1-209ENST00000589214 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
ERCC1-209ENST00000589214 SPATA8Q6RVD6 105 aa6.11□□□□□ -1.43
ERCC1-209ENST00000589214 A0A0D9SG42 100 aa6.1□□□□□ -1.43
ERCC1-209ENST00000589214 LINC01558Q9Y6Z2 57 aa6.09□□□□□ -1.43
ERCC1-209ENST00000589214 KRTAP10-12P60413 245 aa6.05□□□□□ -1.44
ERCC1-209ENST00000589214 CAMK2N1Q7Z7J9 78 aa6.04□□□□□ -1.44
ERCC1-209ENST00000589214 PRR15LQ9BU68 103 aa6.04□□□□□ -1.44
ERCC1-209ENST00000589214 LCE1AQ5T7P2 110 aa6.03□□□□□ -1.44
ERCC1-209ENST00000589214 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
ERCC1-209ENST00000589214 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
ERCC1-209ENST00000589214 SPINT4Q6UDR6 99 aa5.99□□□□□ -1.45
ERCC1-209ENST00000589214 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
ERCC1-209ENST00000589214 SMIM26A0A096LP01 95 aa5.93□□□□□ -1.46
ERCC1-209ENST00000589214 SPRR2DP22532 72 aa5.93□□□□□ -1.46
ERCC1-209ENST00000589214 RPS28P62857 69 aaKnown RBP5.93□□□□□ -1.46
ERCC1-209ENST00000589214 Q1T7F1 81 aa5.93□□□□□ -1.46
ERCC1-209ENST00000589214 V9GYY9 64 aa5.93□□□□□ -1.46
ERCC1-209ENST00000589214 A8MU10 97 aa5.92□□□□□ -1.46
ERCC1-209ENST00000589214 UQCR11O14957 56 aa5.86□□□□□ -1.47
ERCC1-209ENST00000589214 PSPHP1O15172 72 aa5.83□□□□□ -1.48
ERCC1-209ENST00000589214 KRTAP2-2Q9BYT5 123 aa5.82□□□□□ -1.48
ERCC1-209ENST00000589214 KRTAP2-1Q9BYU5 128 aa5.82□□□□□ -1.48
ERCC1-209ENST00000589214 MIR22HGQ0VDD5 57 aa5.76□□□□□ -1.49
ERCC1-209ENST00000589214 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
ERCC1-209ENST00000589214 KRTAP19-7Q3SYF9 63 aa5.71□□□□□ -1.5
ERCC1-209ENST00000589214 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
ERCC1-209ENST00000589214 MT1EP04732 61 aa5.67□□□□□ -1.5
ERCC1-209ENST00000589214 A6NED7 52 aa5.65□□□□□ -1.5
ERCC1-209ENST00000589214 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
ERCC1-209ENST00000589214 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
ERCC1-209ENST00000589214 KRTAP19-3Q7Z4W3 81 aa5.61□□□□□ -1.51
ERCC1-209ENST00000589214 TNP1P09430 55 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 286.2 ms