RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 MP68P56378 58 aa6.5□□□□□ -1.37
CLPTM1-210ENST00000589158 TRAV7A0A075B6U4 112 aa6.49□□□□□ -1.37
CLPTM1-210ENST00000589158 KRTAP3-3Q9BYR6 98 aa6.48□□□□□ -1.37
CLPTM1-210ENST00000589158 SMIM20Q8N5G0 67 aa6.47□□□□□ -1.37
CLPTM1-210ENST00000589158 KLKP1Q107X0 134 aa6.45□□□□□ -1.38
CLPTM1-210ENST00000589158 SERP2Q8N6R1 65 aa6.44□□□□□ -1.38
CLPTM1-210ENST00000589158 FCGBPQ9Y6R7 5405 aaPredicted RBP6.43□□□□□ -1.38
CLPTM1-210ENST00000589158 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.43□□□□□ -1.38
CLPTM1-210ENST00000589158 KRTAP19-6Q3LI70 58 aa6.42□□□□□ -1.38
CLPTM1-210ENST00000589158 A8MUN3 132 aa6.41□□□□□ -1.38
CLPTM1-210ENST00000589158 NDUFC1O43677 76 aa6.41□□□□□ -1.38
CLPTM1-210ENST00000589158 H3BPC8 53 aa6.38□□□□□ -1.39
CLPTM1-210ENST00000589158 COX7CP15954 63 aa6.37□□□□□ -1.39
CLPTM1-210ENST00000589158 ANAPC13Q9BS18 74 aa6.37□□□□□ -1.39
CLPTM1-210ENST00000589158 C20orf197Q8N268 126 aa6.35□□□□□ -1.39
CLPTM1-210ENST00000589158 SPRR2GQ9BYE4 73 aa6.34□□□□□ -1.39
CLPTM1-210ENST00000589158 SNURFQ9Y675 71 aa6.34□□□□□ -1.39
CLPTM1-210ENST00000589158 KRTAP9-7A8MTY7 169 aa6.32□□□□□ -1.4
CLPTM1-210ENST00000589158 Q5VV11 94 aa6.31□□□□□ -1.4
CLPTM1-210ENST00000589158 CYSTM1Q9H1C7 97 aa6.3□□□□□ -1.4
CLPTM1-210ENST00000589158 CCDC179H3BU77 68 aa6.29□□□□□ -1.4
CLPTM1-210ENST00000589158 CRIPTQ9P021 101 aa6.29□□□□□ -1.4
CLPTM1-210ENST00000589158 MACF1Q9UPN3 7388 aaKnown RBP6.28□□□□□ -1.4
CLPTM1-210ENST00000589158 H0YAA0 97 aa6.28□□□□□ -1.4
CLPTM1-210ENST00000589158 MT1BP07438 61 aa6.28□□□□□ -1.4
CLPTM1-210ENST00000589158 KRTAP19-8Q3LI54 63 aa6.28□□□□□ -1.4
CLPTM1-210ENST00000589158 ADM2Q7Z4H4 148 aa6.26□□□□□ -1.41
CLPTM1-210ENST00000589158 DMAC1Q96GE9 116 aa6.26□□□□□ -1.41
CLPTM1-210ENST00000589158 A6NN06 94 aa6.2□□□□□ -1.42
CLPTM1-210ENST00000589158 H7BZZ5 65 aa6.2□□□□□ -1.42
CLPTM1-210ENST00000589158 SYNE2Q8WXH0 6885 aaKnown RBP6.18□□□□□ -1.42
CLPTM1-210ENST00000589158 KRTAP3-2Q9BYR7 98 aa6.17□□□□□ -1.42
CLPTM1-210ENST00000589158 ACYP2P14621 99 aa6.15□□□□□ -1.42
CLPTM1-210ENST00000589158 SPANXA2-OT1Q8N9U9 137 aa6.15□□□□□ -1.42
CLPTM1-210ENST00000589158 PCP4P48539 62 aa6.12□□□□□ -1.43
CLPTM1-210ENST00000589158 KRTAP10-5P60370 271 aa6.12□□□□□ -1.43
CLPTM1-210ENST00000589158 P0C880 135 aa6.11□□□□□ -1.43
CLPTM1-210ENST00000589158 R4GN34 69 aa6.1□□□□□ -1.43
CLPTM1-210ENST00000589158 CHKB-CPT1BH3BT56 60 aa6.07□□□□□ -1.44
CLPTM1-210ENST00000589158 SPTSSBQ8NFR3 76 aa6.07□□□□□ -1.44
CLPTM1-210ENST00000589158 M0QZ58 72 aa6.06□□□□□ -1.44
CLPTM1-210ENST00000589158 KRTAP6-3Q3LI67 103 aa6.04□□□□□ -1.44
CLPTM1-210ENST00000589158 PLAC4Q8WY50 150 aa6.02□□□□□ -1.45
CLPTM1-210ENST00000589158 TMEM258P61165 79 aa6.01□□□□□ -1.45
CLPTM1-210ENST00000589158 LINC01554Q52M75 96 aa5.99□□□□□ -1.45
CLPTM1-210ENST00000589158 COA5Q86WW8 74 aa5.99□□□□□ -1.45
CLPTM1-210ENST00000589158 ATP5EP56381 51 aaPredicted RBP5.98□□□□□ -1.45
CLPTM1-210ENST00000589158 PRO2289Q9P1D8 64 aa5.96□□□□□ -1.46
CLPTM1-210ENST00000589158 MT1XP80297 61 aa5.91□□□□□ -1.46
CLPTM1-210ENST00000589158 SERP1Q9Y6X1 66 aa5.83□□□□□ -1.48
CLPTM1-210ENST00000589158 NEBP20929 6669 aa5.79□□□□□ -1.48
CLPTM1-210ENST00000589158 KRTAP5-9P26371 169 aa5.78□□□□□ -1.48
CLPTM1-210ENST00000589158 SEC61GP60059 68 aa5.75□□□□□ -1.49
CLPTM1-210ENST00000589158 KRTAP12-2P59991 146 aa5.74□□□□□ -1.49
CLPTM1-210ENST00000589158 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
CLPTM1-210ENST00000589158 MUC12Q9UKN1 5478 aa5.73□□□□□ -1.49
CLPTM1-210ENST00000589158 KRTAP8-1Q8IUC2 63 aa5.7□□□□□ -1.5
CLPTM1-210ENST00000589158 KMT2DO14686 5537 aa5.69□□□□□ -1.5
CLPTM1-210ENST00000589158 RPS28P62857 69 aaKnown RBP5.69□□□□□ -1.5
CLPTM1-210ENST00000589158 SPRR2FQ96RM1 72 aa5.68□□□□□ -1.5
CLPTM1-210ENST00000589158 KRTAP10-7P60409 375 aaPredicted RBP5.66□□□□□ -1.5
CLPTM1-210ENST00000589158 LINC01558Q9Y6Z2 57 aa5.66□□□□□ -1.5
CLPTM1-210ENST00000589158 KRTAP4-8A0A0G2JLE6 195 aa5.64□□□□□ -1.51
CLPTM1-210ENST00000589158 CAMK2N1Q7Z7J9 78 aa5.64□□□□□ -1.51
CLPTM1-210ENST00000589158 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
CLPTM1-210ENST00000589158 SMIM26A0A096LP01 95 aa5.63□□□□□ -1.51
CLPTM1-210ENST00000589158 A0A0D9SG42 100 aa5.63□□□□□ -1.51
CLPTM1-210ENST00000589158 A0A1B0GU33 70 aa5.63□□□□□ -1.51
CLPTM1-210ENST00000589158 MDN1Q9NU22 5596 aa5.63□□□□□ -1.51
CLPTM1-210ENST00000589158 A0A1B0GU69 56 aa5.62□□□□□ -1.51
CLPTM1-210ENST00000589158 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
CLPTM1-210ENST00000589158 SPATA8Q6RVD6 105 aa5.61□□□□□ -1.51
CLPTM1-210ENST00000589158 Q1T7F1 81 aa5.59□□□□□ -1.51
CLPTM1-210ENST00000589158 SPRR2EP22531 72 aa5.58□□□□□ -1.52
CLPTM1-210ENST00000589158 SPRR2BP35325 72 aa5.58□□□□□ -1.52
CLPTM1-210ENST00000589158 SPRR2AP35326 72 aa5.58□□□□□ -1.52
CLPTM1-210ENST00000589158 KRTAP20-1Q3LI63 56 aa5.57□□□□□ -1.52
CLPTM1-210ENST00000589158 PRR15LQ9BU68 103 aa5.56□□□□□ -1.52
CLPTM1-210ENST00000589158 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
CLPTM1-210ENST00000589158 V9GYY9 64 aa5.54□□□□□ -1.52
CLPTM1-210ENST00000589158 PSPHP1O15172 72 aa5.51□□□□□ -1.53
CLPTM1-210ENST00000589158 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
CLPTM1-210ENST00000589158 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
CLPTM1-210ENST00000589158 KRTAP2-3P0C7H8 128 aa5.44□□□□□ -1.54
CLPTM1-210ENST00000589158 KRTAP2-4Q9BYR9 128 aa5.44□□□□□ -1.54
CLPTM1-210ENST00000589158 A8MU10 97 aa5.43□□□□□ -1.54
CLPTM1-210ENST00000589158 SPRR2DP22532 72 aa5.4□□□□□ -1.54
CLPTM1-210ENST00000589158 UQCR11O14957 56 aa5.39□□□□□ -1.55
CLPTM1-210ENST00000589158 MIR22HGQ0VDD5 57 aa5.34□□□□□ -1.55
CLPTM1-210ENST00000589158 LOC100996750A0A140TA64 210 aa5.32□□□□□ -1.56
CLPTM1-210ENST00000589158 KRTAP4-6Q9BYQ5 205 aa5.32□□□□□ -1.56
CLPTM1-210ENST00000589158 A6NED7 52 aa5.31□□□□□ -1.56
CLPTM1-210ENST00000589158 KRTAP19-7Q3SYF9 63 aa5.27□□□□□ -1.57
CLPTM1-210ENST00000589158 KRTAP2-2Q9BYT5 123 aa5.27□□□□□ -1.57
CLPTM1-210ENST00000589158 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
CLPTM1-210ENST00000589158 MT1EP04732 61 aa5.24□□□□□ -1.57
CLPTM1-210ENST00000589158 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
CLPTM1-210ENST00000589158 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
CLPTM1-210ENST00000589158 TNP1P09430 55 aa5.21□□□□□ -1.58
CLPTM1-210ENST00000589158 KRTAP19-5Q3LI72 72 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms