RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 SNURFQ9Y675 71 aa9.38□□□□□ -0.91
CIRBP-220ENST00000588917 COX7CP15954 63 aa9.37□□□□□ -0.91
CIRBP-220ENST00000588917 DMAC1Q96GE9 116 aa9.33□□□□□ -0.92
CIRBP-220ENST00000588917 NDUFC1O43677 76 aa9.31□□□□□ -0.92
CIRBP-220ENST00000588917 MT2AP02795 61 aa9.29□□□□□ -0.92
CIRBP-220ENST00000588917 ANAPC13Q9BS18 74 aa9.29□□□□□ -0.92
CIRBP-220ENST00000588917 ACYP2P14621 99 aa9.27□□□□□ -0.93
CIRBP-220ENST00000588917 KRTAP3-3Q9BYR6 98 aa9.27□□□□□ -0.93
CIRBP-220ENST00000588917 KRTAP10-10P60014 251 aa9.26□□□□□ -0.93
CIRBP-220ENST00000588917 SPANXA2-OT1Q8N9U9 137 aa9.26□□□□□ -0.93
CIRBP-220ENST00000588917 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.23□□□□□ -0.93
CIRBP-220ENST00000588917 KRTAP9-7A8MTY7 169 aa9.21□□□□□ -0.94
CIRBP-220ENST00000588917 MT1FP04733 61 aa9.2□□□□□ -0.94
CIRBP-220ENST00000588917 USH2AO75445 5202 aa9.2□□□□□ -0.94
CIRBP-220ENST00000588917 SSPOA2VEC9 5147 aa9.18□□□□□ -0.94
CIRBP-220ENST00000588917 SPTSSBQ8NFR3 76 aa9.1□□□□□ -0.95
CIRBP-220ENST00000588917 H0YAA0 97 aa9.08□□□□□ -0.96
CIRBP-220ENST00000588917 CHKB-CPT1BH3BT56 60 aa9.08□□□□□ -0.96
CIRBP-220ENST00000588917 H7BZZ5 65 aa9.08□□□□□ -0.96
CIRBP-220ENST00000588917 KRTAP9-3Q9BYQ3 159 aa9.08□□□□□ -0.96
CIRBP-220ENST00000588917 FCGBPQ9Y6R7 5405 aaPredicted RBP9.03□□□□□ -0.96
CIRBP-220ENST00000588917 CCDC179H3BU77 68 aa9.03□□□□□ -0.96
CIRBP-220ENST00000588917 CYSTM1Q9H1C7 97 aa9.02□□□□□ -0.97
CIRBP-220ENST00000588917 LCE2BO14633 110 aa9□□□□□ -0.97
CIRBP-220ENST00000588917 KRTAP19-1Q8IUB9 90 aa8.98□□□□□ -0.97
CIRBP-220ENST00000588917 CRIPTQ9P021 101 aa8.97□□□□□ -0.97
CIRBP-220ENST00000588917 ADM2Q7Z4H4 148 aa8.95□□□□□ -0.98
CIRBP-220ENST00000588917 COA5Q86WW8 74 aa8.92□□□□□ -0.98
CIRBP-220ENST00000588917 ATP5EP56381 51 aaPredicted RBP8.88□□□□□ -0.99
CIRBP-220ENST00000588917 SPRR2GQ9BYE4 73 aa8.84□□□□□ -0.99
CIRBP-220ENST00000588917 MACF1Q9UPN3 7388 aaKnown RBP8.82□□□□□ -1
CIRBP-220ENST00000588917 SYNE2Q8WXH0 6885 aaKnown RBP8.8□□□□□ -1
CIRBP-220ENST00000588917 TMEM258P61165 79 aa8.79□□□□□ -1
CIRBP-220ENST00000588917 P0C880 135 aa8.77□□□□□ -1.01
CIRBP-220ENST00000588917 KRTAP3-2Q9BYR7 98 aa8.77□□□□□ -1.01
CIRBP-220ENST00000588917 KRTAP19-6Q3LI70 58 aa8.75□□□□□ -1.01
CIRBP-220ENST00000588917 R4GN34 69 aa8.73□□□□□ -1.01
CIRBP-220ENST00000588917 SEC61GP60059 68 aa8.7□□□□□ -1.02
CIRBP-220ENST00000588917 KRTAP19-8Q3LI54 63 aa8.69□□□□□ -1.02
CIRBP-220ENST00000588917 Q5VV11 94 aa8.69□□□□□ -1.02
CIRBP-220ENST00000588917 SERP1Q9Y6X1 66 aa8.66□□□□□ -1.02
CIRBP-220ENST00000588917 M0QZ58 72 aa8.65□□□□□ -1.02
CIRBP-220ENST00000588917 PCP4P48539 62 aa8.58□□□□□ -1.04
CIRBP-220ENST00000588917 MT1BP07438 61 aa8.57□□□□□ -1.04
CIRBP-220ENST00000588917 KRTAP6-3Q3LI67 103 aa8.54□□□□□ -1.04
CIRBP-220ENST00000588917 A0A1B0GU69 56 aa8.51□□□□□ -1.05
CIRBP-220ENST00000588917 LINC01554Q52M75 96 aa8.49□□□□□ -1.05
CIRBP-220ENST00000588917 PLAC4Q8WY50 150 aa8.49□□□□□ -1.05
CIRBP-220ENST00000588917 PRR15LQ9BU68 103 aa8.45□□□□□ -1.06
CIRBP-220ENST00000588917 A0A1B0GU33 70 aa8.44□□□□□ -1.06
CIRBP-220ENST00000588917 LINC01558Q9Y6Z2 57 aa8.41□□□□□ -1.06
CIRBP-220ENST00000588917 A6NN06 94 aa8.38□□□□□ -1.07
CIRBP-220ENST00000588917 KRTAP13-4Q3LI77 160 aa8.35□□□□□ -1.07
CIRBP-220ENST00000588917 KRTAP10-5P60370 271 aa8.33□□□□□ -1.08
CIRBP-220ENST00000588917 PRO2289Q9P1D8 64 aa8.3□□□□□ -1.08
CIRBP-220ENST00000588917 V9GYY9 64 aa8.3□□□□□ -1.08
CIRBP-220ENST00000588917 NEBP20929 6669 aa8.28□□□□□ -1.08
CIRBP-220ENST00000588917 SPATA8Q6RVD6 105 aa8.28□□□□□ -1.08
CIRBP-220ENST00000588917 RPS28P62857 69 aaKnown RBP8.26□□□□□ -1.09
CIRBP-220ENST00000588917 SMIM26A0A096LP01 95 aa8.24□□□□□ -1.09
CIRBP-220ENST00000588917 A0A0D9SG42 100 aa8.2□□□□□ -1.1
CIRBP-220ENST00000588917 Q1T7F1 81 aa8.2□□□□□ -1.1
CIRBP-220ENST00000588917 UQCR11O14957 56 aa8.16□□□□□ -1.1
CIRBP-220ENST00000588917 MT1XP80297 61 aa8.16□□□□□ -1.1
CIRBP-220ENST00000588917 MUC12Q9UKN1 5478 aa8.15□□□□□ -1.1
CIRBP-220ENST00000588917 CAMK2N1Q7Z7J9 78 aa8.11□□□□□ -1.11
CIRBP-220ENST00000588917 SPINT4Q6UDR6 99 aa8.1□□□□□ -1.11
CIRBP-220ENST00000588917 PSPHP1O15172 72 aa8.05□□□□□ -1.12
CIRBP-220ENST00000588917 KRTAP12-1P59990 96 aa8.05□□□□□ -1.12
CIRBP-220ENST00000588917 KRTAP20-1Q3LI63 56 aa8.05□□□□□ -1.12
CIRBP-220ENST00000588917 A8MU10 97 aa8.04□□□□□ -1.12
CIRBP-220ENST00000588917 KRTAP5-9P26371 169 aa8.01□□□□□ -1.13
CIRBP-220ENST00000588917 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
CIRBP-220ENST00000588917 MIR22HGQ0VDD5 57 aa7.98□□□□□ -1.13
CIRBP-220ENST00000588917 KMT2DO14686 5537 aa7.95□□□□□ -1.14
CIRBP-220ENST00000588917 MDN1Q9NU22 5596 aa7.92□□□□□ -1.14
CIRBP-220ENST00000588917 A6NED7 52 aa7.86□□□□□ -1.15
CIRBP-220ENST00000588917 K7ERS5 55 aa7.83□□□□□ -1.16
CIRBP-220ENST00000588917 KRTAP10-12P60413 245 aa7.8□□□□□ -1.16
CIRBP-220ENST00000588917 KRTAP10-7P60409 375 aaPredicted RBP7.79□□□□□ -1.16
CIRBP-220ENST00000588917 KRTAP2-3P0C7H8 128 aa7.77□□□□□ -1.17
CIRBP-220ENST00000588917 KRTAP2-4Q9BYR9 128 aa7.77□□□□□ -1.17
CIRBP-220ENST00000588917 SPRR2FQ96RM1 72 aa7.7□□□□□ -1.18
CIRBP-220ENST00000588917 KRTAP8-1Q8IUC2 63 aa7.69□□□□□ -1.18
CIRBP-220ENST00000588917 SPRR2EP22531 72 aa7.65□□□□□ -1.18
CIRBP-220ENST00000588917 SPRR2BP35325 72 aa7.65□□□□□ -1.18
CIRBP-220ENST00000588917 SPRR2AP35326 72 aa7.65□□□□□ -1.18
CIRBP-220ENST00000588917 KRTAP4-8A0A0G2JLE6 195 aa7.64□□□□□ -1.19
CIRBP-220ENST00000588917 KRTAP4-8Q9BYQ9 185 aa7.64□□□□□ -1.19
CIRBP-220ENST00000588917 C10orf95Q9H7T3 257 aa7.64□□□□□ -1.19
CIRBP-220ENST00000588917 TNP1P09430 55 aa7.62□□□□□ -1.19
CIRBP-220ENST00000588917 CDC42SE1Q9NRR8 79 aa7.61□□□□□ -1.19
CIRBP-220ENST00000588917 LCE1AQ5T7P2 110 aa7.51□□□□□ -1.21
CIRBP-220ENST00000588917 KRTAP2-2Q9BYT5 123 aa7.51□□□□□ -1.21
CIRBP-220ENST00000588917 KRTAP2-1Q9BYU5 128 aa7.51□□□□□ -1.21
CIRBP-220ENST00000588917 KRTAP25-1Q3LHN0 102 aa7.43□□□□□ -1.22
CIRBP-220ENST00000588917 SPRR2DP22532 72 aa7.41□□□□□ -1.22
CIRBP-220ENST00000588917 ROMO1P60602 79 aa7.31□□□□□ -1.24
CIRBP-220ENST00000588917 LCE3AQ5TA76 89 aa7.31□□□□□ -1.24
CIRBP-220ENST00000588917 KRTAP19-7Q3SYF9 63 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms