RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 RNF213Q63HN8 5207 aa5.73□□□□□ -1.49
SMAD4-205ENST00000588745 H1FX-AS1Q4G0G2 97 aa5.71□□□□□ -1.5
SMAD4-205ENST00000588745 MUC2Q02817 5179 aa5.69□□□□□ -1.5
SMAD4-205ENST00000588745 SPTSSBQ8NFR3 76 aa5.67□□□□□ -1.5
SMAD4-205ENST00000588745 S4R3F8 94 aa5.67□□□□□ -1.5
SMAD4-205ENST00000588745 Q1T7F1 81 aa5.66□□□□□ -1.5
SMAD4-205ENST00000588745 KRTAP19-2Q3LHN2 52 aa5.66□□□□□ -1.5
SMAD4-205ENST00000588745 LCA10Q71F78 164 aa5.66□□□□□ -1.5
SMAD4-205ENST00000588745 V9GYY9 64 aa5.65□□□□□ -1.51
SMAD4-205ENST00000588745 LINC01558Q9Y6Z2 57 aa5.63□□□□□ -1.51
SMAD4-205ENST00000588745 LCE2AQ5TA79 106 aaPredicted RBP5.62□□□□□ -1.51
SMAD4-205ENST00000588745 FLGP20930 4061 aaPredicted RBP5.57□□□□□ -1.52
SMAD4-205ENST00000588745 LCE2CQ5TA81 110 aa5.57□□□□□ -1.52
SMAD4-205ENST00000588745 PRR15LQ9BU68 103 aa5.57□□□□□ -1.52
SMAD4-205ENST00000588745 PSPHP1O15172 72 aa5.55□□□□□ -1.52
SMAD4-205ENST00000588745 A0A1B0GU69 56 aa5.55□□□□□ -1.52
SMAD4-205ENST00000588745 FAT4Q6V0I7 4981 aa5.54□□□□□ -1.52
SMAD4-205ENST00000588745 CSAG1Q6PB30 78 aa5.54□□□□□ -1.52
SMAD4-205ENST00000588745 Q5VV11 94 aa5.53□□□□□ -1.52
SMAD4-205ENST00000588745 SEC61GP60059 68 aa5.51□□□□□ -1.53
SMAD4-205ENST00000588745 H0YAA0 97 aa5.43□□□□□ -1.54
SMAD4-205ENST00000588745 LORP23490 312 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-205ENST00000588745 MT1HP80294 61 aa5.42□□□□□ -1.54
SMAD4-205ENST00000588745 KRTAP10-6P60371 365 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-205ENST00000588745 ADM2Q7Z4H4 148 aa5.42□□□□□ -1.54
SMAD4-205ENST00000588745 A6NED7 52 aa5.4□□□□□ -1.55
SMAD4-205ENST00000588745 P0C880 135 aa5.38□□□□□ -1.55
SMAD4-205ENST00000588745 A0A1B0GU33 70 aa5.37□□□□□ -1.55
SMAD4-205ENST00000588745 UQCR11O14957 56 aa5.37□□□□□ -1.55
SMAD4-205ENST00000588745 M0R2T5 61 aa5.36□□□□□ -1.55
SMAD4-205ENST00000588745 BRK1Q8WUW1 75 aa5.32□□□□□ -1.56
SMAD4-205ENST00000588745 MIR22HGQ0VDD5 57 aa5.3□□□□□ -1.56
SMAD4-205ENST00000588745 CDC42SE1Q9NRR8 79 aa5.3□□□□□ -1.56
SMAD4-205ENST00000588745 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
SMAD4-205ENST00000588745 KRTAP13-4Q3LI77 160 aa5.28□□□□□ -1.56
SMAD4-205ENST00000588745 A8MU10 97 aa5.26□□□□□ -1.57
SMAD4-205ENST00000588745 M0QZ58 72 aa5.25□□□□□ -1.57
SMAD4-205ENST00000588745 R4GN34 69 aa5.22□□□□□ -1.57
SMAD4-205ENST00000588745 H3BS24 57 aa5.21□□□□□ -1.58
SMAD4-205ENST00000588745 MT2AP02795 61 aa5.21□□□□□ -1.58
SMAD4-205ENST00000588745 KRTAP9-8Q9BYQ0 159 aa5.2□□□□□ -1.58
SMAD4-205ENST00000588745 CRIPTQ9P021 101 aa5.2□□□□□ -1.58
SMAD4-205ENST00000588745 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
SMAD4-205ENST00000588745 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
SMAD4-205ENST00000588745 PRO0628Q9UI54 55 aa5.19□□□□□ -1.58
SMAD4-205ENST00000588745 MT1FP04733 61 aa5.17□□□□□ -1.58
SMAD4-205ENST00000588745 A0A0D9SG42 100 aa5.16□□□□□ -1.58
SMAD4-205ENST00000588745 KRTAP10-10P60014 251 aa5.15□□□□□ -1.59
SMAD4-205ENST00000588745 LINC01554Q52M75 96 aa5.12□□□□□ -1.59
SMAD4-205ENST00000588745 SPRR2GQ9BYE4 73 aa5.1□□□□□ -1.59
SMAD4-205ENST00000588745 K7ERS5 55 aa5.07□□□□□ -1.6
SMAD4-205ENST00000588745 KRTAP12-1P59990 96 aa5.07□□□□□ -1.6
SMAD4-205ENST00000588745 KRTAP19-1Q8IUB9 90 aa5.07□□□□□ -1.6
SMAD4-205ENST00000588745 A6NN06 94 aa5.05□□□□□ -1.6
SMAD4-205ENST00000588745 KRTAP12-2P59991 146 aa5.05□□□□□ -1.6
SMAD4-205ENST00000588745 SPINT4Q6UDR6 99 aa5.05□□□□□ -1.6
SMAD4-205ENST00000588745 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
SMAD4-205ENST00000588745 PMAIP1Q13794 54 aa5.02□□□□□ -1.61
SMAD4-205ENST00000588745 KRTAP19-8Q3LI54 63 aa4.97□□□□□ -1.61
SMAD4-205ENST00000588745 MT1BP07438 61 aa4.91□□□□□ -1.62
SMAD4-205ENST00000588745 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
SMAD4-205ENST00000588745 CAMK2N1Q7Z7J9 78 aa4.9□□□□□ -1.63
SMAD4-205ENST00000588745 ROMO1P60602 79 aa4.87□□□□□ -1.63
SMAD4-205ENST00000588745 USH2AO75445 5202 aa4.85□□□□□ -1.63
SMAD4-205ENST00000588745 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
SMAD4-205ENST00000588745 C10orf95Q9H7T3 257 aa4.79□□□□□ -1.64
SMAD4-205ENST00000588745 MT1XP80297 61 aa4.74□□□□□ -1.65
SMAD4-205ENST00000588745 SSPOA2VEC9 5147 aa4.73□□□□□ -1.65
SMAD4-205ENST00000588745 KRTAP10-5P60370 271 aa4.72□□□□□ -1.65
SMAD4-205ENST00000588745 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
SMAD4-205ENST00000588745 SVIPQ8NHG7 77 aa4.69□□□□□ -1.66
SMAD4-205ENST00000588745 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
SMAD4-205ENST00000588745 KRTAP25-1Q3LHN0 102 aa4.67□□□□□ -1.66
SMAD4-205ENST00000588745 KRTAP4-8Q9BYQ9 185 aa4.66□□□□□ -1.66
SMAD4-205ENST00000588745 TNP1P09430 55 aa4.65□□□□□ -1.66
SMAD4-205ENST00000588745 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-205ENST00000588745 KRTAP19-6Q3LI70 58 aa4.61□□□□□ -1.67
SMAD4-205ENST00000588745 KRTAP9-2Q9BYQ4 174 aa4.59□□□□□ -1.67
SMAD4-205ENST00000588745 FSIP2Q5CZC0 6907 aa4.59□□□□□ -1.67
SMAD4-205ENST00000588745 KRTAP9-6A0A140TA67 174 aa4.57□□□□□ -1.68
SMAD4-205ENST00000588745 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-205ENST00000588745 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
SMAD4-205ENST00000588745 KRTAP23-1A1A580 65 aa4.51□□□□□ -1.69
SMAD4-205ENST00000588745 KRTAP10-12P60413 245 aa4.5□□□□□ -1.69
SMAD4-205ENST00000588745 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
SMAD4-205ENST00000588745 LCE3BQ5TA77 95 aa4.46□□□□□ -1.7
SMAD4-205ENST00000588745 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.7
SMAD4-205ENST00000588745 FCGBPQ9Y6R7 5405 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-205ENST00000588745 KRTAP19-4Q3LI73 84 aa4.41□□□□□ -1.7
SMAD4-205ENST00000588745 CRCT1Q9UGL9 99 aa4.4□□□□□ -1.71
SMAD4-205ENST00000588745 KMT2DO14686 5537 aa4.38□□□□□ -1.71
SMAD4-205ENST00000588745 KRTAP8-1Q8IUC2 63 aa4.38□□□□□ -1.71
SMAD4-205ENST00000588745 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
SMAD4-205ENST00000588745 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
SMAD4-205ENST00000588745 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
SMAD4-205ENST00000588745 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
SMAD4-205ENST00000588745 KRTAP19-5Q3LI72 72 aa4.27□□□□□ -1.73
SMAD4-205ENST00000588745 MACF1Q9UPN3 7388 aaKnown RBP4.25□□□□□ -1.73
SMAD4-205ENST00000588745 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
SMAD4-205ENST00000588745 KRTAP4-7Q9BYR0 210 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms