RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 SPRR2EP22531 72 aa7.84□□□□□ -1.15
CCDC43-204ENST00000588687 SPRR2BP35325 72 aa7.84□□□□□ -1.15
CCDC43-204ENST00000588687 SPRR2AP35326 72 aa7.84□□□□□ -1.15
CCDC43-204ENST00000588687 SMIM6P0DI80 62 aa7.81□□□□□ -1.16
CCDC43-204ENST00000588687 TP53AIP1Q9HCN2 124 aa7.81□□□□□ -1.16
CCDC43-204ENST00000588687 UBL5Q9BZL1 73 aa7.8□□□□□ -1.16
CCDC43-204ENST00000588687 MT1XP80297 61 aa7.79□□□□□ -1.16
CCDC43-204ENST00000588687 CYP4F30PQ9H0H9 118 aa7.77□□□□□ -1.17
CCDC43-204ENST00000588687 H0YAA0 97 aa7.75□□□□□ -1.17
CCDC43-204ENST00000588687 LCE1AQ5T7P2 110 aa7.75□□□□□ -1.17
CCDC43-204ENST00000588687 KRTAP4-12Q9BQ66 201 aa7.72□□□□□ -1.17
CCDC43-204ENST00000588687 PRO0461Q9UI25 63 aa7.72□□□□□ -1.17
CCDC43-204ENST00000588687 SPCS1Q9Y6A9 102 aa7.72□□□□□ -1.17
CCDC43-204ENST00000588687 KRTAP8-1Q8IUC2 63 aa7.69□□□□□ -1.18
CCDC43-204ENST00000588687 KRTAP2-2Q9BYT5 123 aa7.69□□□□□ -1.18
CCDC43-204ENST00000588687 KRTAP2-1Q9BYU5 128 aa7.69□□□□□ -1.18
CCDC43-204ENST00000588687 PRO2289Q9P1D8 64 aa7.69□□□□□ -1.18
CCDC43-204ENST00000588687 KRTAP12-2P59991 146 aa7.66□□□□□ -1.18
CCDC43-204ENST00000588687 LCE3BQ5TA77 95 aa7.64□□□□□ -1.19
CCDC43-204ENST00000588687 TRAV22A0A0B4J277 110 aa7.63□□□□□ -1.19
CCDC43-204ENST00000588687 LOC101927531A0A1B0GV80 90 aa7.63□□□□□ -1.19
CCDC43-204ENST00000588687 A8MUN3 132 aa7.63□□□□□ -1.19
CCDC43-204ENST00000588687 K7EP34 96 aa7.63□□□□□ -1.19
CCDC43-204ENST00000588687 NDUFC1O43677 76 aa7.61□□□□□ -1.19
CCDC43-204ENST00000588687 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
CCDC43-204ENST00000588687 SPRR2DP22532 72 aa7.58□□□□□ -1.2
CCDC43-204ENST00000588687 KRTAP9-9Q9BYP9 154 aa7.57□□□□□ -1.2
CCDC43-204ENST00000588687 KRTAP9-4Q9BYQ2 154 aa7.57□□□□□ -1.2
CCDC43-204ENST00000588687 KRTAP4-8A0A0G2JLE6 195 aa7.56□□□□□ -1.2
CCDC43-204ENST00000588687 PLAC4Q8WY50 150 aa7.52□□□□□ -1.21
CCDC43-204ENST00000588687 H0Y9P7 68 aa7.44□□□□□ -1.22
CCDC43-204ENST00000588687 ACYP1P07311 99 aa7.43□□□□□ -1.22
CCDC43-204ENST00000588687 P0C880 135 aa7.43□□□□□ -1.22
CCDC43-204ENST00000588687 UQCRQO14949 82 aa7.42□□□□□ -1.22
CCDC43-204ENST00000588687 COL5A1-AS1Q5SY13 56 aa7.42□□□□□ -1.22
CCDC43-204ENST00000588687 ATOX1O00244 68 aa7.41□□□□□ -1.22
CCDC43-204ENST00000588687 KRTAP10-7P60409 375 aaPredicted RBP7.41□□□□□ -1.22
CCDC43-204ENST00000588687 R4GN34 69 aa7.41□□□□□ -1.22
CCDC43-204ENST00000588687 LOC105371267A0A1B0GV96 52 aa7.4□□□□□ -1.22
CCDC43-204ENST00000588687 ETDBQ3ZM63 59 aa7.4□□□□□ -1.22
CCDC43-204ENST00000588687 KRTAP10-12P60413 245 aa7.38□□□□□ -1.23
CCDC43-204ENST00000588687 GPR98Q8WXG9 6306 aa7.37□□□□□ -1.23
CCDC43-204ENST00000588687 M0QZ58 72 aa7.36□□□□□ -1.23
CCDC43-204ENST00000588687 F8W1H4 67 aa7.34□□□□□ -1.23
CCDC43-204ENST00000588687 C20orf197Q8N268 126 aa7.3□□□□□ -1.24
CCDC43-204ENST00000588687 ATP5EP2Q5VTU8 51 aa7.29□□□□□ -1.24
CCDC43-204ENST00000588687 GTF2H5Q6ZYL4 71 aa7.29□□□□□ -1.24
CCDC43-204ENST00000588687 HIST1H4AP62805 103 aaKnown RBP7.27□□□□□ -1.25
CCDC43-204ENST00000588687 LINC00208Q96KT6 92 aa7.27□□□□□ -1.25
CCDC43-204ENST00000588687 DSTQ03001 7570 aaKnown RBP7.25□□□□□ -1.25
CCDC43-204ENST00000588687 H3BS24 57 aa7.25□□□□□ -1.25
CCDC43-204ENST00000588687 LINC01554Q52M75 96 aa7.24□□□□□ -1.25
CCDC43-204ENST00000588687 FAM240AA0A1B0GVK7 77 aa7.22□□□□□ -1.25
CCDC43-204ENST00000588687 OCR1Q9BZK8 76 aa7.18□□□□□ -1.26
CCDC43-204ENST00000588687 LCE1DQ5T752 114 aa7.16□□□□□ -1.26
CCDC43-204ENST00000588687 DMAC1Q96GE9 116 aa7.16□□□□□ -1.26
CCDC43-204ENST00000588687 KRTAP4-7Q9BYR0 210 aa7.16□□□□□ -1.26
CCDC43-204ENST00000588687 MP68P56378 58 aa7.12□□□□□ -1.27
CCDC43-204ENST00000588687 LINC00643Q86TS7 51 aa7.04□□□□□ -1.28
CCDC43-204ENST00000588687 LCE5AQ5TCM9 118 aa7.03□□□□□ -1.28
CCDC43-204ENST00000588687 KRTAP4-9Q9BYQ8 210 aa7.02□□□□□ -1.29
CCDC43-204ENST00000588687 H3BPC8 53 aa7□□□□□ -1.29
CCDC43-204ENST00000588687 KRTAP19-7Q3SYF9 63 aa6.98□□□□□ -1.29
CCDC43-204ENST00000588687 MT-ATP8P03928 68 aa6.97□□□□□ -1.29
CCDC43-204ENST00000588687 TRAV7A0A075B6U4 112 aa6.95□□□□□ -1.3
CCDC43-204ENST00000588687 LCE4AQ5TA78 99 aa6.94□□□□□ -1.3
CCDC43-204ENST00000588687 MT1EP04732 61 aa6.92□□□□□ -1.3
CCDC43-204ENST00000588687 KRTAP19-3Q7Z4W3 81 aa6.92□□□□□ -1.3
CCDC43-204ENST00000588687 KRTAP4-2Q9BYR5 136 aa6.9□□□□□ -1.3
CCDC43-204ENST00000588687 HMCN1Q96RW7 5635 aa6.87□□□□□ -1.31
CCDC43-204ENST00000588687 PCP4L1A6NKN8 68 aa6.87□□□□□ -1.31
CCDC43-204ENST00000588687 KRTAP13-4Q3LI77 160 aa6.82□□□□□ -1.32
CCDC43-204ENST00000588687 ACYP2P14621 99 aa6.81□□□□□ -1.32
CCDC43-204ENST00000588687 SPTSSBQ8NFR3 76 aa6.77□□□□□ -1.33
CCDC43-204ENST00000588687 AHNAK2Q8IVF2 5795 aa6.76□□□□□ -1.33
CCDC43-204ENST00000588687 CYSTM1Q9H1C7 97 aa6.75□□□□□ -1.33
CCDC43-204ENST00000588687 PCP4P48539 62 aa6.73□□□□□ -1.33
CCDC43-204ENST00000588687 CAMK2N1Q7Z7J9 78 aa6.73□□□□□ -1.33
CCDC43-204ENST00000588687 KRTAP4-11Q9BYQ6 195 aa6.73□□□□□ -1.33
CCDC43-204ENST00000588687 SCGB1A1P11684 91 aa6.71□□□□□ -1.34
CCDC43-204ENST00000588687 MT1GP13640 62 aa6.67□□□□□ -1.34
CCDC43-204ENST00000588687 MT4P47944 62 aa6.66□□□□□ -1.34
CCDC43-204ENST00000588687 CHKB-CPT1BH3BT56 60 aa6.65□□□□□ -1.34
CCDC43-204ENST00000588687 KRTAP19-5Q3LI72 72 aa6.65□□□□□ -1.34
CCDC43-204ENST00000588687 MT1MQ8N339 61 aa6.61□□□□□ -1.35
CCDC43-204ENST00000588687 A0A0D9SG42 100 aa6.59□□□□□ -1.35
CCDC43-204ENST00000588687 KRTAP5-10Q6L8G5 202 aa6.59□□□□□ -1.35
CCDC43-204ENST00000588687 PP632Q6XCG6 107 aa6.58□□□□□ -1.36
CCDC43-204ENST00000588687 KRTAP5-4Q6L8H1 288 aa6.57□□□□□ -1.36
CCDC43-204ENST00000588687 MT1LQ93083 61 aa6.54□□□□□ -1.36
CCDC43-204ENST00000588687 A0A1B0GV90 55 aa6.51□□□□□ -1.37
CCDC43-204ENST00000588687 J3QR89 54 aa6.48□□□□□ -1.37
CCDC43-204ENST00000588687 KRTAP4-3Q9BYR4 195 aa6.48□□□□□ -1.37
CCDC43-204ENST00000588687 SMIM20Q8N5G0 67 aa6.46□□□□□ -1.38
CCDC43-204ENST00000588687 KRTAP19-4Q3LI73 84 aa6.45□□□□□ -1.38
CCDC43-204ENST00000588687 SPANXA2-OT1Q8N9U9 137 aa6.45□□□□□ -1.38
CCDC43-204ENST00000588687 SNURFQ9Y675 71 aa6.45□□□□□ -1.38
CCDC43-204ENST00000588687 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
CCDC43-204ENST00000588687 SPATA8Q6RVD6 105 aa6.38□□□□□ -1.39
CCDC43-204ENST00000588687 KRTAP5-7Q6L8G8 165 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms