RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 FAT3Q8TDW7 4589 aa9.45□□□□□ -0.9
ERCC2-211ENST00000588652 KRTAP17-1Q9BYP8 105 aa9.43□□□□□ -0.9
ERCC2-211ENST00000588652 KIAA1109Q2LD37 5005 aa9.38□□□□□ -0.91
ERCC2-211ENST00000588652 DMBT1Q9UGM3 2413 aaPredicted RBP9.35□□□□□ -0.91
ERCC2-211ENST00000588652 KRTAP3-1Q9BYR8 98 aa9.33□□□□□ -0.92
ERCC2-211ENST00000588652 MYCBP2O75592 4640 aa9.28□□□□□ -0.92
ERCC2-211ENST00000588652 MT1HL1P0DM35 61 aa9.26□□□□□ -0.93
ERCC2-211ENST00000588652 EPPK1P58107 5090 aaKnown RBP9.25□□□□□ -0.93
ERCC2-211ENST00000588652 COX6B2Q6YFQ2 88 aa9.21□□□□□ -0.94
ERCC2-211ENST00000588652 PRAC1Q96KF2 57 aa9.21□□□□□ -0.94
ERCC2-211ENST00000588652 RPL37P61927 97 aaKnown RBP9.2□□□□□ -0.94
ERCC2-211ENST00000588652 ADM2Q7Z4H4 148 aa9.2□□□□□ -0.94
ERCC2-211ENST00000588652 XP32Q5T750 250 aa9.2□□□□□ -0.94
ERCC2-211ENST00000588652 H0YAA0 97 aa9.15□□□□□ -0.94
ERCC2-211ENST00000588652 A0A1B0GU33 70 aa9.14□□□□□ -0.95
ERCC2-211ENST00000588652 H1FX-AS1Q4G0G2 97 aa9.1□□□□□ -0.95
ERCC2-211ENST00000588652 LINC01554Q52M75 96 aa9.09□□□□□ -0.96
ERCC2-211ENST00000588652 KRTAP4-5Q9BYR2 181 aa9.03□□□□□ -0.96
ERCC2-211ENST00000588652 TPRXLQ17RH7 258 aa8.99□□□□□ -0.97
ERCC2-211ENST00000588652 LRP2P98164 4655 aa8.94□□□□□ -0.98
ERCC2-211ENST00000588652 KRTAP23-1A1A580 65 aa8.94□□□□□ -0.98
ERCC2-211ENST00000588652 CSAG1Q6PB30 78 aa8.94□□□□□ -0.98
ERCC2-211ENST00000588652 ABCA13Q86UQ4 5058 aa8.92□□□□□ -0.98
ERCC2-211ENST00000588652 K7ERS5 55 aa8.91□□□□□ -0.98
ERCC2-211ENST00000588652 LPAP08519 4548 aa8.9□□□□□ -0.99
ERCC2-211ENST00000588652 S4R3F8 94 aa8.9□□□□□ -0.99
ERCC2-211ENST00000588652 KRTAP10-6P60371 365 aaPredicted RBP8.86□□□□□ -0.99
ERCC2-211ENST00000588652 LCE2CQ5TA81 110 aa8.85□□□□□ -0.99
ERCC2-211ENST00000588652 LCE2AQ5TA79 106 aaPredicted RBP8.82□□□□□ -1
ERCC2-211ENST00000588652 KRTAP13-4Q3LI77 160 aa8.77□□□□□ -1.01
ERCC2-211ENST00000588652 HERC2O95714 4834 aa8.73□□□□□ -1.01
ERCC2-211ENST00000588652 KRTAP25-1Q3LHN0 102 aa8.71□□□□□ -1.01
ERCC2-211ENST00000588652 A0A0D9SG42 100 aa8.69□□□□□ -1.02
ERCC2-211ENST00000588652 LCE2BO14633 110 aa8.68□□□□□ -1.02
ERCC2-211ENST00000588652 P0C880 135 aa8.68□□□□□ -1.02
ERCC2-211ENST00000588652 ROMO1P60602 79 aa8.63□□□□□ -1.03
ERCC2-211ENST00000588652 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
ERCC2-211ENST00000588652 CRIPTQ9P021 101 aa8.58□□□□□ -1.04
ERCC2-211ENST00000588652 MUC17Q685J3 4493 aa8.56□□□□□ -1.04
ERCC2-211ENST00000588652 KRTAP4-1Q9BYQ7 146 aa8.52□□□□□ -1.05
ERCC2-211ENST00000588652 KRTAP12-2P59991 146 aa8.48□□□□□ -1.05
ERCC2-211ENST00000588652 M0QZ58 72 aa8.46□□□□□ -1.06
ERCC2-211ENST00000588652 SPINT4Q6UDR6 99 aa8.43□□□□□ -1.06
ERCC2-211ENST00000588652 KRTAP12-1P59990 96 aa8.42□□□□□ -1.06
ERCC2-211ENST00000588652 KRTAP19-2Q3LHN2 52 aa8.36□□□□□ -1.07
ERCC2-211ENST00000588652 PCLOQ9Y6V0 5065 aa8.33□□□□□ -1.08
ERCC2-211ENST00000588652 HERC1Q15751 4861 aa8.31□□□□□ -1.08
ERCC2-211ENST00000588652 C10orf95Q9H7T3 257 aa8.3□□□□□ -1.08
ERCC2-211ENST00000588652 LUZP6Q538Z0 58 aa8.28□□□□□ -1.08
ERCC2-211ENST00000588652 MUC2Q02817 5179 aa8.27□□□□□ -1.08
ERCC2-211ENST00000588652 R4GN34 69 aa8.27□□□□□ -1.09
ERCC2-211ENST00000588652 LORP23490 312 aaPredicted RBP8.26□□□□□ -1.09
ERCC2-211ENST00000588652 HMCN2Q8NDA2 5059 aa8.23□□□□□ -1.09
ERCC2-211ENST00000588652 FLGP20930 4061 aaPredicted RBP8.11□□□□□ -1.11
ERCC2-211ENST00000588652 KRTAP15-1Q3LI76 137 aa7.95□□□□□ -1.14
ERCC2-211ENST00000588652 CAMK2N1Q7Z7J9 78 aa7.91□□□□□ -1.14
ERCC2-211ENST00000588652 FAT4Q6V0I7 4981 aa7.91□□□□□ -1.14
ERCC2-211ENST00000588652 NDUFAF8A1L188 74 aa7.87□□□□□ -1.15
ERCC2-211ENST00000588652 UBR4Q5T4S7 5183 aa7.84□□□□□ -1.15
ERCC2-211ENST00000588652 RNF213Q63HN8 5207 aa7.82□□□□□ -1.16
ERCC2-211ENST00000588652 MT1HP80294 61 aa7.77□□□□□ -1.17
ERCC2-211ENST00000588652 M0R2T5 61 aa7.73□□□□□ -1.17
ERCC2-211ENST00000588652 PP632Q6XCG6 107 aa7.7□□□□□ -1.18
ERCC2-211ENST00000588652 SPRR2GQ9BYE4 73 aa7.63□□□□□ -1.19
ERCC2-211ENST00000588652 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
ERCC2-211ENST00000588652 KRTAP19-1Q8IUB9 90 aa7.6□□□□□ -1.19
ERCC2-211ENST00000588652 MT2AP02795 61 aa7.57□□□□□ -1.2
ERCC2-211ENST00000588652 MT1FP04733 61 aa7.56□□□□□ -1.2
ERCC2-211ENST00000588652 TNP1P09430 55 aa7.56□□□□□ -1.2
ERCC2-211ENST00000588652 KRTAP9-8Q9BYQ0 159 aa7.56□□□□□ -1.2
ERCC2-211ENST00000588652 KRTAP10-10P60014 251 aa7.53□□□□□ -1.2
ERCC2-211ENST00000588652 KRTAP19-8Q3LI54 63 aa7.35□□□□□ -1.23
ERCC2-211ENST00000588652 MT1BP07438 61 aa7.25□□□□□ -1.25
ERCC2-211ENST00000588652 KRTAP9-3Q9BYQ3 159 aa7.25□□□□□ -1.25
ERCC2-211ENST00000588652 SPRR5A0A1B0GTR4 108 aa7.13□□□□□ -1.27
ERCC2-211ENST00000588652 KRTAP10-5P60370 271 aa7.13□□□□□ -1.27
ERCC2-211ENST00000588652 MT1XP80297 61 aa7.13□□□□□ -1.27
ERCC2-211ENST00000588652 LCE3AQ5TA76 89 aa7.11□□□□□ -1.27
ERCC2-211ENST00000588652 KRTAP8-1Q8IUC2 63 aa6.93□□□□□ -1.3
ERCC2-211ENST00000588652 PRO2289Q9P1D8 64 aa6.91□□□□□ -1.3
ERCC2-211ENST00000588652 KRTAP10-7P60409 375 aaPredicted RBP6.89□□□□□ -1.31
ERCC2-211ENST00000588652 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
ERCC2-211ENST00000588652 USH2AO75445 5202 aa6.83□□□□□ -1.32
ERCC2-211ENST00000588652 KRTAP12-3P60328 96 aa6.79□□□□□ -1.32
ERCC2-211ENST00000588652 KMT2DO14686 5537 aa6.56□□□□□ -1.36
ERCC2-211ENST00000588652 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
ERCC2-211ENST00000588652 KRTAP4-8A0A0G2JLE6 195 aa6.53□□□□□ -1.36
ERCC2-211ENST00000588652 KRTAP4-8Q9BYQ9 185 aa6.53□□□□□ -1.36
ERCC2-211ENST00000588652 SSPOA2VEC9 5147 aa6.49□□□□□ -1.37
ERCC2-211ENST00000588652 KRTAP19-4Q3LI73 84 aa6.44□□□□□ -1.38
ERCC2-211ENST00000588652 INE1O15225 51 aa6.42□□□□□ -1.38
ERCC2-211ENST00000588652 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
ERCC2-211ENST00000588652 KRTAP19-6Q3LI70 58 aa6.39□□□□□ -1.39
ERCC2-211ENST00000588652 LCE3CQ5T5A8 94 aa6.38□□□□□ -1.39
ERCC2-211ENST00000588652 KRTAP19-7Q3SYF9 63 aa6.36□□□□□ -1.39
ERCC2-211ENST00000588652 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
ERCC2-211ENST00000588652 KRTAP9-4Q9BYQ2 154 aa6.29□□□□□ -1.4
ERCC2-211ENST00000588652 MT1EP04732 61 aa6.19□□□□□ -1.42
ERCC2-211ENST00000588652 KRTAP9-6A8MVA2 160 aa6.16□□□□□ -1.42
ERCC2-211ENST00000588652 MT1LQ93083 61 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 275.4 ms