RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 FAM236BA0A1B0GV22 79 aa9.43□□□□□ -0.9
DDX39A-207ENST00000588542 CSAG1Q6PB30 78 aa9.43□□□□□ -0.9
DDX39A-207ENST00000588542 A8MUN3 132 aa9.37□□□□□ -0.91
DDX39A-207ENST00000588542 TRAV7A0A075B6U4 112 aa9.36□□□□□ -0.91
DDX39A-207ENST00000588542 SMIM20Q8N5G0 67 aa9.36□□□□□ -0.91
DDX39A-207ENST00000588542 SSPOA2VEC9 5147 aa9.35□□□□□ -0.91
DDX39A-207ENST00000588542 NDUFC1O43677 76 aa9.25□□□□□ -0.93
DDX39A-207ENST00000588542 DMAC1Q96GE9 116 aa9.23□□□□□ -0.93
DDX39A-207ENST00000588542 KRTAP19-1Q8IUB9 90 aa9.21□□□□□ -0.94
DDX39A-207ENST00000588542 SERP2Q8N6R1 65 aa9.15□□□□□ -0.94
DDX39A-207ENST00000588542 SNURFQ9Y675 71 aa9.15□□□□□ -0.94
DDX39A-207ENST00000588542 H0YAA0 97 aa9.13□□□□□ -0.95
DDX39A-207ENST00000588542 SPRR2GQ9BYE4 73 aa9.11□□□□□ -0.95
DDX39A-207ENST00000588542 C20orf197Q8N268 126 aa9.09□□□□□ -0.95
DDX39A-207ENST00000588542 FCGBPQ9Y6R7 5405 aaPredicted RBP9.09□□□□□ -0.95
DDX39A-207ENST00000588542 KRTAP19-6Q3LI70 58 aa9.06□□□□□ -0.96
DDX39A-207ENST00000588542 ACYP2P14621 99 aa9.04□□□□□ -0.96
DDX39A-207ENST00000588542 ADM2Q7Z4H4 148 aa9.03□□□□□ -0.96
DDX39A-207ENST00000588542 CRIPTQ9P021 101 aa9.02□□□□□ -0.97
DDX39A-207ENST00000588542 KRTAP19-8Q3LI54 63 aa9.01□□□□□ -0.97
DDX39A-207ENST00000588542 MT1BP07438 61 aa8.99□□□□□ -0.97
DDX39A-207ENST00000588542 SPANXA2-OT1Q8N9U9 137 aa8.98□□□□□ -0.97
DDX39A-207ENST00000588542 COX7CP15954 63 aa8.95□□□□□ -0.98
DDX39A-207ENST00000588542 Q5VV11 94 aa8.94□□□□□ -0.98
DDX39A-207ENST00000588542 P0C880 135 aa8.9□□□□□ -0.98
DDX39A-207ENST00000588542 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
DDX39A-207ENST00000588542 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.87□□□□□ -0.99
DDX39A-207ENST00000588542 CHKB-CPT1BH3BT56 60 aa8.84□□□□□ -0.99
DDX39A-207ENST00000588542 SPTSSBQ8NFR3 76 aa8.84□□□□□ -0.99
DDX39A-207ENST00000588542 CYSTM1Q9H1C7 97 aa8.82□□□□□ -1
DDX39A-207ENST00000588542 H7BZZ5 65 aa8.77□□□□□ -1.01
DDX39A-207ENST00000588542 ANAPC13Q9BS18 74 aa8.77□□□□□ -1.01
DDX39A-207ENST00000588542 R4GN34 69 aa8.76□□□□□ -1.01
DDX39A-207ENST00000588542 KRTAP9-7A8MTY7 169 aa8.72□□□□□ -1.01
DDX39A-207ENST00000588542 A6NN06 94 aa8.71□□□□□ -1.02
DDX39A-207ENST00000588542 M0QZ58 72 aa8.71□□□□□ -1.02
DDX39A-207ENST00000588542 COA5Q86WW8 74 aa8.71□□□□□ -1.02
DDX39A-207ENST00000588542 MACF1Q9UPN3 7388 aaKnown RBP8.7□□□□□ -1.02
DDX39A-207ENST00000588542 KRTAP10-5P60370 271 aa8.7□□□□□ -1.02
DDX39A-207ENST00000588542 CCDC179H3BU77 68 aa8.63□□□□□ -1.03
DDX39A-207ENST00000588542 LINC01554Q52M75 96 aa8.56□□□□□ -1.04
DDX39A-207ENST00000588542 PLAC4Q8WY50 150 aa8.56□□□□□ -1.04
DDX39A-207ENST00000588542 SYNE2Q8WXH0 6885 aaKnown RBP8.52□□□□□ -1.05
DDX39A-207ENST00000588542 MT1XP80297 61 aa8.49□□□□□ -1.05
DDX39A-207ENST00000588542 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
DDX39A-207ENST00000588542 PRO2289Q9P1D8 64 aa8.43□□□□□ -1.06
DDX39A-207ENST00000588542 SEC61GP60059 68 aa8.39□□□□□ -1.07
DDX39A-207ENST00000588542 KRTAP6-3Q3LI67 103 aa8.39□□□□□ -1.07
DDX39A-207ENST00000588542 ATP5EP56381 51 aaPredicted RBP8.38□□□□□ -1.07
DDX39A-207ENST00000588542 SERP1Q9Y6X1 66 aa8.37□□□□□ -1.07
DDX39A-207ENST00000588542 TMEM258P61165 79 aa8.28□□□□□ -1.08
DDX39A-207ENST00000588542 A0A1B0GU33 70 aa8.26□□□□□ -1.09
DDX39A-207ENST00000588542 A0A1B0GU69 56 aa8.23□□□□□ -1.09
DDX39A-207ENST00000588542 SPATA8Q6RVD6 105 aa8.23□□□□□ -1.09
DDX39A-207ENST00000588542 KMT2DO14686 5537 aa8.23□□□□□ -1.09
DDX39A-207ENST00000588542 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
DDX39A-207ENST00000588542 A0A0D9SG42 100 aa8.17□□□□□ -1.1
DDX39A-207ENST00000588542 KRTAP5-9P26371 169 aa8.15□□□□□ -1.1
DDX39A-207ENST00000588542 MUC12Q9UKN1 5478 aa8.12□□□□□ -1.11
DDX39A-207ENST00000588542 KRTAP10-7P60409 375 aaPredicted RBP8.12□□□□□ -1.11
DDX39A-207ENST00000588542 LINC01558Q9Y6Z2 57 aa8.1□□□□□ -1.11
DDX39A-207ENST00000588542 CAMK2N1Q7Z7J9 78 aa8.08□□□□□ -1.12
DDX39A-207ENST00000588542 KRTAP10-12P60413 245 aa8.07□□□□□ -1.12
DDX39A-207ENST00000588542 KRTAP12-1P59990 96 aa8.05□□□□□ -1.12
DDX39A-207ENST00000588542 KRTAP4-8A0A0G2JLE6 195 aa8.04□□□□□ -1.12
DDX39A-207ENST00000588542 PRR15LQ9BU68 103 aa8.04□□□□□ -1.12
DDX39A-207ENST00000588542 KRTAP4-8Q9BYQ9 185 aa8.04□□□□□ -1.12
DDX39A-207ENST00000588542 SPINT4Q6UDR6 99 aa8.02□□□□□ -1.13
DDX39A-207ENST00000588542 SMIM26A0A096LP01 95 aa8.01□□□□□ -1.13
DDX39A-207ENST00000588542 KRTAP8-1Q8IUC2 63 aa8.01□□□□□ -1.13
DDX39A-207ENST00000588542 A8MU10 97 aa8□□□□□ -1.13
DDX39A-207ENST00000588542 NEBP20929 6669 aa7.97□□□□□ -1.13
DDX39A-207ENST00000588542 MDN1Q9NU22 5596 aa7.97□□□□□ -1.13
DDX39A-207ENST00000588542 SPRR2FQ96RM1 72 aa7.95□□□□□ -1.14
DDX39A-207ENST00000588542 UQCR11O14957 56 aa7.81□□□□□ -1.16
DDX39A-207ENST00000588542 PCP4P48539 62 aa7.8□□□□□ -1.16
DDX39A-207ENST00000588542 SPRR2EP22531 72 aa7.76□□□□□ -1.17
DDX39A-207ENST00000588542 SPRR2BP35325 72 aa7.76□□□□□ -1.17
DDX39A-207ENST00000588542 SPRR2AP35326 72 aa7.76□□□□□ -1.17
DDX39A-207ENST00000588542 Q1T7F1 81 aa7.76□□□□□ -1.17
DDX39A-207ENST00000588542 V9GYY9 64 aa7.75□□□□□ -1.17
DDX39A-207ENST00000588542 LCE1AQ5T7P2 110 aa7.74□□□□□ -1.17
DDX39A-207ENST00000588542 PSPHP1O15172 72 aa7.7□□□□□ -1.18
DDX39A-207ENST00000588542 C10orf95Q9H7T3 257 aa7.68□□□□□ -1.18
DDX39A-207ENST00000588542 MIR22HGQ0VDD5 57 aa7.67□□□□□ -1.18
DDX39A-207ENST00000588542 KRTAP20-1Q3LI63 56 aa7.63□□□□□ -1.19
DDX39A-207ENST00000588542 RPS28P62857 69 aaKnown RBP7.61□□□□□ -1.19
DDX39A-207ENST00000588542 KRTAP19-7Q3SYF9 63 aa7.6□□□□□ -1.19
DDX39A-207ENST00000588542 TNP1P09430 55 aa7.54□□□□□ -1.2
DDX39A-207ENST00000588542 MT1EP04732 61 aa7.5□□□□□ -1.21
DDX39A-207ENST00000588542 KRTAP2-3P0C7H8 128 aa7.5□□□□□ -1.21
DDX39A-207ENST00000588542 KRTAP2-4Q9BYR9 128 aa7.5□□□□□ -1.21
DDX39A-207ENST00000588542 SPRR2DP22532 72 aa7.49□□□□□ -1.21
DDX39A-207ENST00000588542 KRTAP19-5Q3LI72 72 aa7.47□□□□□ -1.21
DDX39A-207ENST00000588542 LCE3AQ5TA76 89 aa7.45□□□□□ -1.22
DDX39A-207ENST00000588542 A6NED7 52 aa7.43□□□□□ -1.22
DDX39A-207ENST00000588542 K7ERS5 55 aa7.41□□□□□ -1.22
DDX39A-207ENST00000588542 LCE5AQ5TCM9 118 aa7.36□□□□□ -1.23
DDX39A-207ENST00000588542 KRTAP19-3Q7Z4W3 81 aa7.36□□□□□ -1.23
DDX39A-207ENST00000588542 KRTAP2-2Q9BYT5 123 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms