RNA–Protein interactions for RNA: ENST00000586518.1

H3F3B-203, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 1,701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-203ENST00000586518 PRO0628Q9UI54 55 aa15.18■□□□□ 0.02
H3F3B-203ENST00000586518 H1FX-AS1Q4G0G2 97 aa15.12■□□□□ 0.01
H3F3B-203ENST00000586518 S4R3F8 94 aa15.09■□□□□ 0.01
H3F3B-203ENST00000586518 LRP2P98164 4655 aa15.04■□□□□ -0
H3F3B-203ENST00000586518 LPAP08519 4548 aa15.02■□□□□ -0
H3F3B-203ENST00000586518 LCA10Q71F78 164 aa15□□□□□ -0.01
H3F3B-203ENST00000586518 CDC42SE1Q9NRR8 79 aa14.98□□□□□ -0.01
H3F3B-203ENST00000586518 UQCR11O14957 56 aa14.95□□□□□ -0.02
H3F3B-203ENST00000586518 KRTAP3-3Q9BYR6 98 aa14.9□□□□□ -0.02
H3F3B-203ENST00000586518 MIR22HGQ0VDD5 57 aa14.79□□□□□ -0.04
H3F3B-203ENST00000586518 SPATA8Q6RVD6 105 aa14.77□□□□□ -0.05
H3F3B-203ENST00000586518 A8MU10 97 aa14.75□□□□□ -0.05
H3F3B-203ENST00000586518 CSAG1Q6PB30 78 aa14.75□□□□□ -0.05
H3F3B-203ENST00000586518 SVIPQ8NHG7 77 aa14.74□□□□□ -0.05
H3F3B-203ENST00000586518 A0A1B0GU33 70 aa14.73□□□□□ -0.05
H3F3B-203ENST00000586518 KRTAP4-1Q9BYQ7 146 aa14.73□□□□□ -0.05
H3F3B-203ENST00000586518 MUC17Q685J3 4493 aa14.64□□□□□ -0.07
H3F3B-203ENST00000586518 PCLOQ9Y6V0 5065 aa14.63□□□□□ -0.07
H3F3B-203ENST00000586518 PMAIP1Q13794 54 aa14.52□□□□□ -0.08
H3F3B-203ENST00000586518 KRTAP10-6P60371 365 aaPredicted RBP14.5□□□□□ -0.09
H3F3B-203ENST00000586518 KRTAP3-2Q9BYR7 98 aa14.48□□□□□ -0.09
H3F3B-203ENST00000586518 H0YAA0 97 aa14.45□□□□□ -0.1
H3F3B-203ENST00000586518 ADM2Q7Z4H4 148 aa14.45□□□□□ -0.1
H3F3B-203ENST00000586518 HMCN2Q8NDA2 5059 aa14.39□□□□□ -0.11
H3F3B-203ENST00000586518 HERC1Q15751 4861 aa14.39□□□□□ -0.11
H3F3B-203ENST00000586518 KRTAP19-2Q3LHN2 52 aa14.38□□□□□ -0.11
H3F3B-203ENST00000586518 P0C880 135 aa14.34□□□□□ -0.11
H3F3B-203ENST00000586518 A6NN06 94 aa14.29□□□□□ -0.12
H3F3B-203ENST00000586518 K7ERS5 55 aa14.19□□□□□ -0.14
H3F3B-203ENST00000586518 M0QZ58 72 aa14.16□□□□□ -0.14
H3F3B-203ENST00000586518 KRTAP13-4Q3LI77 160 aa14.13□□□□□ -0.15
H3F3B-203ENST00000586518 A0A0D9SG42 100 aa14.03□□□□□ -0.16
H3F3B-203ENST00000586518 KTN1-AS1Q86SY8 53 aa14.01□□□□□ -0.17
H3F3B-203ENST00000586518 R4GN34 69 aa13.96□□□□□ -0.17
H3F3B-203ENST00000586518 LCE2CQ5TA81 110 aa13.92□□□□□ -0.18
H3F3B-203ENST00000586518 MUC2Q02817 5179 aa13.9□□□□□ -0.18
H3F3B-203ENST00000586518 FLGP20930 4061 aaPredicted RBP13.89□□□□□ -0.19
H3F3B-203ENST00000586518 M0R2T5 61 aa13.76□□□□□ -0.21
H3F3B-203ENST00000586518 CRIPTQ9P021 101 aa13.73□□□□□ -0.21
H3F3B-203ENST00000586518 SPINT4Q6UDR6 99 aa13.72□□□□□ -0.21
H3F3B-203ENST00000586518 LORP23490 312 aaPredicted RBP13.7□□□□□ -0.22
H3F3B-203ENST00000586518 LINC01554Q52M75 96 aa13.7□□□□□ -0.22
H3F3B-203ENST00000586518 KRTAP12-1P59990 96 aa13.68□□□□□ -0.22
H3F3B-203ENST00000586518 MT1HP80294 61 aa13.67□□□□□ -0.22
H3F3B-203ENST00000586518 RNF213Q63HN8 5207 aa13.66□□□□□ -0.22
H3F3B-203ENST00000586518 KRTAP12-2P59991 146 aa13.64□□□□□ -0.23
H3F3B-203ENST00000586518 UBR4Q5T4S7 5183 aa13.6□□□□□ -0.23
H3F3B-203ENST00000586518 ROMO1P60602 79 aa13.54□□□□□ -0.24
H3F3B-203ENST00000586518 PRAC1Q96KF2 57 aa13.44□□□□□ -0.26
H3F3B-203ENST00000586518 FAT4Q6V0I7 4981 aa13.29□□□□□ -0.28
H3F3B-203ENST00000586518 KRTAP10-10P60014 251 aa13.25□□□□□ -0.29
H3F3B-203ENST00000586518 MT2AP02795 61 aa13.22□□□□□ -0.29
H3F3B-203ENST00000586518 SPRR2GQ9BYE4 73 aa13.2□□□□□ -0.3
H3F3B-203ENST00000586518 KRTAP9-8Q9BYQ0 159 aa13.2□□□□□ -0.3
H3F3B-203ENST00000586518 CAMK2N1Q7Z7J9 78 aa13.16□□□□□ -0.3
H3F3B-203ENST00000586518 MT1FP04733 61 aa13.13□□□□□ -0.31
H3F3B-203ENST00000586518 KRTAP25-1Q3LHN0 102 aa13.13□□□□□ -0.31
H3F3B-203ENST00000586518 KRTAP19-1Q8IUB9 90 aa13.05□□□□□ -0.32
H3F3B-203ENST00000586518 PLAC4Q8WY50 150 aa13.02□□□□□ -0.33
H3F3B-203ENST00000586518 C10orf95Q9H7T3 257 aa12.91□□□□□ -0.34
H3F3B-203ENST00000586518 LCE2AQ5TA79 106 aaPredicted RBP12.81□□□□□ -0.36
H3F3B-203ENST00000586518 KRTAP19-8Q3LI54 63 aa12.78□□□□□ -0.36
H3F3B-203ENST00000586518 KRTAP9-3Q9BYQ3 159 aa12.72□□□□□ -0.37
H3F3B-203ENST00000586518 TNP1P09430 55 aa12.58□□□□□ -0.4
H3F3B-203ENST00000586518 MT1BP07438 61 aa12.52□□□□□ -0.41
H3F3B-203ENST00000586518 PP632Q6XCG6 107 aa12.47□□□□□ -0.41
H3F3B-203ENST00000586518 KRTAP23-1A1A580 65 aa12.31□□□□□ -0.44
H3F3B-203ENST00000586518 LCE2BO14633 110 aa12.26□□□□□ -0.45
H3F3B-203ENST00000586518 PRO2289Q9P1D8 64 aa12.25□□□□□ -0.45
H3F3B-203ENST00000586518 MT1XP80297 61 aa12.22□□□□□ -0.45
H3F3B-203ENST00000586518 KRTAP10-5P60370 271 aa12.21□□□□□ -0.45
H3F3B-203ENST00000586518 LCE3AQ5TA76 89 aa11.85□□□□□ -0.51
H3F3B-203ENST00000586518 KRTAP10-12P60413 245 aa11.81□□□□□ -0.52
H3F3B-203ENST00000586518 KRTAP10-7P60409 375 aaPredicted RBP11.74□□□□□ -0.53
H3F3B-203ENST00000586518 KRTAP15-1Q3LI76 137 aa11.65□□□□□ -0.54
H3F3B-203ENST00000586518 KRTAP8-1Q8IUC2 63 aa11.65□□□□□ -0.54
H3F3B-203ENST00000586518 USH2AO75445 5202 aa11.64□□□□□ -0.55
H3F3B-203ENST00000586518 LCE2DQ5TA82 110 aaPredicted RBP11.58□□□□□ -0.56
H3F3B-203ENST00000586518 KRTAP19-6Q3LI70 58 aa11.49□□□□□ -0.57
H3F3B-203ENST00000586518 KRTAP12-3P60328 96 aa11.41□□□□□ -0.58
H3F3B-203ENST00000586518 SSPOA2VEC9 5147 aa11.28□□□□□ -0.6
H3F3B-203ENST00000586518 KRTAP19-5Q3LI72 72 aa11.16□□□□□ -0.62
H3F3B-203ENST00000586518 KRTAP4-8A0A0G2JLE6 195 aa11.15□□□□□ -0.62
H3F3B-203ENST00000586518 KRTAP4-8Q9BYQ9 185 aa11.15□□□□□ -0.62
H3F3B-203ENST00000586518 LUZP6Q538Z0 58 aa11.09□□□□□ -0.63
H3F3B-203ENST00000586518 SPRR5A0A1B0GTR4 108 aa11.05□□□□□ -0.64
H3F3B-203ENST00000586518 NDUFAF8A1L188 74 aa10.96□□□□□ -0.65
H3F3B-203ENST00000586518 KRTAP19-7Q3SYF9 63 aa10.87□□□□□ -0.67
H3F3B-203ENST00000586518 KRTAP9-2Q9BYQ4 174 aa10.85□□□□□ -0.67
H3F3B-203ENST00000586518 FSIP2Q5CZC0 6907 aa10.81□□□□□ -0.68
H3F3B-203ENST00000586518 KMT2DO14686 5537 aa10.8□□□□□ -0.68
H3F3B-203ENST00000586518 KRTAP19-4Q3LI73 84 aa10.77□□□□□ -0.69
H3F3B-203ENST00000586518 MT1EP04732 61 aa10.7□□□□□ -0.7
H3F3B-203ENST00000586518 LCE3CQ5T5A8 94 aa10.69□□□□□ -0.7
H3F3B-203ENST00000586518 FCGBPQ9Y6R7 5405 aaPredicted RBP10.67□□□□□ -0.7
H3F3B-203ENST00000586518 CRCT1Q9UGL9 99 aa10.58□□□□□ -0.72
H3F3B-203ENST00000586518 MT1LQ93083 61 aa10.55□□□□□ -0.72
H3F3B-203ENST00000586518 SPRR2FQ96RM1 72 aa10.27□□□□□ -0.76
H3F3B-203ENST00000586518 H3BS24 57 aa10.25□□□□□ -0.77
H3F3B-203ENST00000586518 KRTAP19-3Q7Z4W3 81 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 294.4 ms