RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 LCE1DQ5T752 114 aa5.84□□□□□ -1.47
TOP3A-216ENST00000583804 Q1T7F1 81 aa5.83□□□□□ -1.48
TOP3A-216ENST00000583804 Q8N9P0 234 aaPredicted RBP5.83□□□□□ -1.48
TOP3A-216ENST00000583804 KRTAP4-2Q9BYR5 136 aa5.83□□□□□ -1.48
TOP3A-216ENST00000583804 MUC17Q685J3 4493 aa5.83□□□□□ -1.48
TOP3A-216ENST00000583804 KRTAP5-3Q6L8H2 238 aa5.82□□□□□ -1.48
TOP3A-216ENST00000583804 Q5W150 140 aa5.81□□□□□ -1.48
TOP3A-216ENST00000583804 LOC101927531A0A1B0GV80 90 aa5.79□□□□□ -1.48
TOP3A-216ENST00000583804 MPLKIPQ8TAP9 179 aa5.79□□□□□ -1.48
TOP3A-216ENST00000583804 KRTAP9-8Q9BYQ0 159 aa5.79□□□□□ -1.48
TOP3A-216ENST00000583804 V9GYY9 64 aa5.79□□□□□ -1.48
TOP3A-216ENST00000583804 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
TOP3A-216ENST00000583804 KRTAP4-1Q9BYQ7 146 aa5.76□□□□□ -1.49
TOP3A-216ENST00000583804 PRO0628Q9UI54 55 aa5.76□□□□□ -1.49
TOP3A-216ENST00000583804 IGKV2D-30A0A075B6S6 120 aa5.74□□□□□ -1.49
TOP3A-216ENST00000583804 IGKV2-30P06310 120 aa5.74□□□□□ -1.49
TOP3A-216ENST00000583804 COA5Q86WW8 74 aa5.73□□□□□ -1.49
TOP3A-216ENST00000583804 MUC2Q02817 5179 aa5.69□□□□□ -1.5
TOP3A-216ENST00000583804 SPINK7P58062 85 aa5.67□□□□□ -1.5
TOP3A-216ENST00000583804 HRES1P13985 223 aa5.66□□□□□ -1.5
TOP3A-216ENST00000583804 BRK1Q8WUW1 75 aa5.66□□□□□ -1.5
TOP3A-216ENST00000583804 C7orf65Q6ZTY9 151 aa5.65□□□□□ -1.5
TOP3A-216ENST00000583804 A8MUN3 132 aa5.64□□□□□ -1.51
TOP3A-216ENST00000583804 PSPHP1O15172 72 aa5.64□□□□□ -1.51
TOP3A-216ENST00000583804 Q5VV11 94 aa5.64□□□□□ -1.51
TOP3A-216ENST00000583804 DMAC1Q96GE9 116 aa5.63□□□□□ -1.51
TOP3A-216ENST00000583804 LINC01558Q9Y6Z2 57 aa5.63□□□□□ -1.51
TOP3A-216ENST00000583804 ACYP2P14621 99 aa5.62□□□□□ -1.51
TOP3A-216ENST00000583804 COX6B2Q6YFQ2 88 aa5.59□□□□□ -1.51
TOP3A-216ENST00000583804 KRTAP19-1Q8IUB9 90 aa5.59□□□□□ -1.51
TOP3A-216ENST00000583804 PRR15LQ9BU68 103 aa5.59□□□□□ -1.51
TOP3A-216ENST00000583804 RBM12B-AS1Q9P1G2 102 aa5.58□□□□□ -1.52
TOP3A-216ENST00000583804 KRTAP19-2Q3LHN2 52 aa5.56□□□□□ -1.52
TOP3A-216ENST00000583804 CHKB-CPT1BH3BT56 60 aa5.55□□□□□ -1.52
TOP3A-216ENST00000583804 FAT4Q6V0I7 4981 aa5.49□□□□□ -1.53
TOP3A-216ENST00000583804 A6NED7 52 aa5.48□□□□□ -1.53
TOP3A-216ENST00000583804 CDC42SE1Q9NRR8 79 aa5.48□□□□□ -1.53
TOP3A-216ENST00000583804 KRTAP3-1Q9BYR8 98 aa5.46□□□□□ -1.53
TOP3A-216ENST00000583804 MT1HP80294 61 aa5.45□□□□□ -1.54
TOP3A-216ENST00000583804 LCA10Q71F78 164 aa5.45□□□□□ -1.54
TOP3A-216ENST00000583804 M0R2T5 61 aa5.44□□□□□ -1.54
TOP3A-216ENST00000583804 H1FX-AS1Q4G0G2 97 aa5.43□□□□□ -1.54
TOP3A-216ENST00000583804 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
TOP3A-216ENST00000583804 A8MU10 97 aa5.42□□□□□ -1.54
TOP3A-216ENST00000583804 A0A1B0GU69 56 aa5.4□□□□□ -1.54
TOP3A-216ENST00000583804 FLGP20930 4061 aaPredicted RBP5.39□□□□□ -1.55
TOP3A-216ENST00000583804 PMAIP1Q13794 54 aa5.37□□□□□ -1.55
TOP3A-216ENST00000583804 SPTSSBQ8NFR3 76 aa5.37□□□□□ -1.55
TOP3A-216ENST00000583804 SEC61GP60059 68 aa5.36□□□□□ -1.55
TOP3A-216ENST00000583804 S4R3F8 94 aa5.35□□□□□ -1.55
TOP3A-216ENST00000583804 A6NN06 94 aa5.33□□□□□ -1.56
TOP3A-216ENST00000583804 SPATA8Q6RVD6 105 aa5.33□□□□□ -1.56
TOP3A-216ENST00000583804 UQCR11O14957 56 aa5.31□□□□□ -1.56
TOP3A-216ENST00000583804 KRTAP10-6P60371 365 aaPredicted RBP5.3□□□□□ -1.56
TOP3A-216ENST00000583804 KTN1-AS1Q86SY8 53 aa5.28□□□□□ -1.56
TOP3A-216ENST00000583804 MIR22HGQ0VDD5 57 aa5.27□□□□□ -1.57
TOP3A-216ENST00000583804 CSAG1Q6PB30 78 aa5.25□□□□□ -1.57
TOP3A-216ENST00000583804 CRCT1Q9UGL9 99 aa5.22□□□□□ -1.57
TOP3A-216ENST00000583804 MT2AP02795 61 aa5.17□□□□□ -1.58
TOP3A-216ENST00000583804 FSIP2Q5CZC0 6907 aa5.15□□□□□ -1.58
TOP3A-216ENST00000583804 KRTAP10-10P60014 251 aa5.15□□□□□ -1.58
TOP3A-216ENST00000583804 A0A1B0GU33 70 aa5.13□□□□□ -1.59
TOP3A-216ENST00000583804 MT1FP04733 61 aa5.13□□□□□ -1.59
TOP3A-216ENST00000583804 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
TOP3A-216ENST00000583804 H0YAA0 97 aa5.13□□□□□ -1.59
TOP3A-216ENST00000583804 ADM2Q7Z4H4 148 aa5.12□□□□□ -1.59
TOP3A-216ENST00000583804 P0C880 135 aa5.07□□□□□ -1.6
TOP3A-216ENST00000583804 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
TOP3A-216ENST00000583804 PRAC1Q96KF2 57 aa4.98□□□□□ -1.61
TOP3A-216ENST00000583804 K7ERS5 55 aa4.97□□□□□ -1.61
TOP3A-216ENST00000583804 CRIPTQ9P021 101 aa4.95□□□□□ -1.62
TOP3A-216ENST00000583804 M0QZ58 72 aa4.94□□□□□ -1.62
TOP3A-216ENST00000583804 KRTAP13-4Q3LI77 160 aa4.92□□□□□ -1.62
TOP3A-216ENST00000583804 R4GN34 69 aa4.92□□□□□ -1.62
TOP3A-216ENST00000583804 LINC01554Q52M75 96 aa4.91□□□□□ -1.62
TOP3A-216ENST00000583804 SPRR2GQ9BYE4 73 aa4.9□□□□□ -1.62
TOP3A-216ENST00000583804 LCE4AQ5TA78 99 aa4.89□□□□□ -1.63
TOP3A-216ENST00000583804 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
TOP3A-216ENST00000583804 A0A0D9SG42 100 aa4.87□□□□□ -1.63
TOP3A-216ENST00000583804 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
TOP3A-216ENST00000583804 ROMO1P60602 79 aa4.83□□□□□ -1.64
TOP3A-216ENST00000583804 KRTAP25-1Q3LHN0 102 aa4.83□□□□□ -1.64
TOP3A-216ENST00000583804 KRTAP19-8Q3LI54 63 aa4.82□□□□□ -1.64
TOP3A-216ENST00000583804 USH2AO75445 5202 aa4.81□□□□□ -1.64
TOP3A-216ENST00000583804 SSPOA2VEC9 5147 aa4.81□□□□□ -1.64
TOP3A-216ENST00000583804 MT1BP07438 61 aa4.78□□□□□ -1.64
TOP3A-216ENST00000583804 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
TOP3A-216ENST00000583804 KRTAP12-1P59990 96 aa4.77□□□□□ -1.65
TOP3A-216ENST00000583804 FCGBPQ9Y6R7 5405 aaPredicted RBP4.76□□□□□ -1.65
TOP3A-216ENST00000583804 KRTAP12-2P59991 146 aa4.75□□□□□ -1.65
TOP3A-216ENST00000583804 SPINT4Q6UDR6 99 aa4.74□□□□□ -1.65
TOP3A-216ENST00000583804 PLAC4Q8WY50 150 aa4.74□□□□□ -1.65
TOP3A-216ENST00000583804 KRTAP19-6Q3LI70 58 aa4.7□□□□□ -1.66
TOP3A-216ENST00000583804 MACF1Q9UPN3 7388 aaKnown RBP4.64□□□□□ -1.67
TOP3A-216ENST00000583804 CAMK2N1Q7Z7J9 78 aa4.62□□□□□ -1.67
TOP3A-216ENST00000583804 KRTAP10-5P60370 271 aa4.61□□□□□ -1.67
TOP3A-216ENST00000583804 PRO2289Q9P1D8 64 aa4.59□□□□□ -1.67
TOP3A-216ENST00000583804 SYNE2Q8WXH0 6885 aaKnown RBP4.59□□□□□ -1.67
TOP3A-216ENST00000583804 MT1XP80297 61 aa4.56□□□□□ -1.68
TOP3A-216ENST00000583804 C10orf95Q9H7T3 257 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms