RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 KRTAP9-3Q9BYQ3 159 aa11.46□□□□□ -0.57
MIR3960-201ENST00000583311 DMAC1Q96GE9 116 aa11.42□□□□□ -0.58
MIR3960-201ENST00000583311 KRTAP9-6A0A140TA67 174 aa11.38□□□□□ -0.59
MIR3960-201ENST00000583311 SNURFQ9Y675 71 aa11.37□□□□□ -0.59
MIR3960-201ENST00000583311 CRCT1Q9UGL9 99 aa11.36□□□□□ -0.59
MIR3960-201ENST00000583311 C20orf197Q8N268 126 aa11.35□□□□□ -0.59
MIR3960-201ENST00000583311 FSIP2Q5CZC0 6907 aa11.34□□□□□ -0.59
MIR3960-201ENST00000583311 LCE2BO14633 110 aa11.28□□□□□ -0.6
MIR3960-201ENST00000583311 ACYP2P14621 99 aa11.28□□□□□ -0.6
MIR3960-201ENST00000583311 COX7CP15954 63 aa11.23□□□□□ -0.61
MIR3960-201ENST00000583311 USH2AO75445 5202 aa11.22□□□□□ -0.61
MIR3960-201ENST00000583311 H0YAA0 97 aa11.22□□□□□ -0.61
MIR3960-201ENST00000583311 SPANXA2-OT1Q8N9U9 137 aa11.21□□□□□ -0.61
MIR3960-201ENST00000583311 CRIPTQ9P021 101 aa11.11□□□□□ -0.63
MIR3960-201ENST00000583311 SPTSSBQ8NFR3 76 aa11.1□□□□□ -0.63
MIR3960-201ENST00000583311 ADM2Q7Z4H4 148 aa11.09□□□□□ -0.63
MIR3960-201ENST00000583311 ANAPC13Q9BS18 74 aa11.09□□□□□ -0.63
MIR3960-201ENST00000583311 CHKB-CPT1BH3BT56 60 aa11.08□□□□□ -0.64
MIR3960-201ENST00000583311 KRTAP19-1Q8IUB9 90 aa11.07□□□□□ -0.64
MIR3960-201ENST00000583311 SPRR2GQ9BYE4 73 aa11.05□□□□□ -0.64
MIR3960-201ENST00000583311 SSPOA2VEC9 5147 aa10.99□□□□□ -0.65
MIR3960-201ENST00000583311 H7BZZ5 65 aa10.93□□□□□ -0.66
MIR3960-201ENST00000583311 Q5VV11 94 aa10.91□□□□□ -0.66
MIR3960-201ENST00000583311 KRTAP19-8Q3LI54 63 aa10.89□□□□□ -0.67
MIR3960-201ENST00000583311 CYSTM1Q9H1C7 97 aa10.89□□□□□ -0.67
MIR3960-201ENST00000583311 KRTAP19-6Q3LI70 58 aa10.86□□□□□ -0.67
MIR3960-201ENST00000583311 P0C880 135 aa10.85□□□□□ -0.67
MIR3960-201ENST00000583311 COA5Q86WW8 74 aa10.84□□□□□ -0.67
MIR3960-201ENST00000583311 KRTAP3-2Q9BYR7 98 aa10.81□□□□□ -0.68
MIR3960-201ENST00000583311 R4GN34 69 aa10.81□□□□□ -0.68
MIR3960-201ENST00000583311 CCDC179H3BU77 68 aa10.79□□□□□ -0.68
MIR3960-201ENST00000583311 MT1BP07438 61 aa10.79□□□□□ -0.68
MIR3960-201ENST00000583311 FCGBPQ9Y6R7 5405 aaPredicted RBP10.72□□□□□ -0.69
MIR3960-201ENST00000583311 M0QZ58 72 aa10.71□□□□□ -0.69
MIR3960-201ENST00000583311 ATP5EP56381 51 aaPredicted RBP10.64□□□□□ -0.71
MIR3960-201ENST00000583311 A6NN06 94 aa10.58□□□□□ -0.72
MIR3960-201ENST00000583311 SEC61GP60059 68 aa10.57□□□□□ -0.72
MIR3960-201ENST00000583311 PLAC4Q8WY50 150 aa10.55□□□□□ -0.72
MIR3960-201ENST00000583311 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.53□□□□□ -0.72
MIR3960-201ENST00000583311 LINC01554Q52M75 96 aa10.53□□□□□ -0.72
MIR3960-201ENST00000583311 SERP1Q9Y6X1 66 aa10.52□□□□□ -0.73
MIR3960-201ENST00000583311 KRTAP10-5P60370 271 aa10.49□□□□□ -0.73
MIR3960-201ENST00000583311 TMEM258P61165 79 aa10.49□□□□□ -0.73
MIR3960-201ENST00000583311 PRO2289Q9P1D8 64 aa10.37□□□□□ -0.75
MIR3960-201ENST00000583311 MACF1Q9UPN3 7388 aaKnown RBP10.34□□□□□ -0.75
MIR3960-201ENST00000583311 A0A1B0GU69 56 aa10.32□□□□□ -0.76
MIR3960-201ENST00000583311 KRTAP13-4Q3LI77 160 aa10.29□□□□□ -0.76
MIR3960-201ENST00000583311 A0A1B0GU33 70 aa10.28□□□□□ -0.76
MIR3960-201ENST00000583311 KRTAP9-7A8MTY7 169 aa10.28□□□□□ -0.76
MIR3960-201ENST00000583311 MT1XP80297 61 aa10.24□□□□□ -0.77
MIR3960-201ENST00000583311 PRR15LQ9BU68 103 aa10.19□□□□□ -0.78
MIR3960-201ENST00000583311 SPATA8Q6RVD6 105 aa10.14□□□□□ -0.79
MIR3960-201ENST00000583311 LINC01558Q9Y6Z2 57 aa10.12□□□□□ -0.79
MIR3960-201ENST00000583311 A0A0D9SG42 100 aa10.09□□□□□ -0.79
MIR3960-201ENST00000583311 SYNE2Q8WXH0 6885 aaKnown RBP10.09□□□□□ -0.79
MIR3960-201ENST00000583311 SMIM26A0A096LP01 95 aa10.03□□□□□ -0.8
MIR3960-201ENST00000583311 KRTAP6-3Q3LI67 103 aa10.03□□□□□ -0.8
MIR3960-201ENST00000583311 CAMK2N1Q7Z7J9 78 aa10.02□□□□□ -0.81
MIR3960-201ENST00000583311 PCP4P48539 62 aa9.99□□□□□ -0.81
MIR3960-201ENST00000583311 KRTAP12-2P59991 146 aa9.96□□□□□ -0.82
MIR3960-201ENST00000583311 SPINT4Q6UDR6 99 aa9.95□□□□□ -0.82
MIR3960-201ENST00000583311 V9GYY9 64 aa9.89□□□□□ -0.83
MIR3960-201ENST00000583311 KRTAP12-1P59990 96 aa9.88□□□□□ -0.83
MIR3960-201ENST00000583311 A8MU10 97 aa9.84□□□□□ -0.83
MIR3960-201ENST00000583311 UQCR11O14957 56 aa9.83□□□□□ -0.84
MIR3960-201ENST00000583311 KRTAP10-7P60409 375 aaPredicted RBP9.77□□□□□ -0.85
MIR3960-201ENST00000583311 Q1T7F1 81 aa9.77□□□□□ -0.85
MIR3960-201ENST00000583311 KRTAP10-12P60413 245 aa9.76□□□□□ -0.85
MIR3960-201ENST00000583311 KRTAP5-9P26371 169 aa9.75□□□□□ -0.85
MIR3960-201ENST00000583311 KRTAP8-1Q8IUC2 63 aa9.72□□□□□ -0.85
MIR3960-201ENST00000583311 KMT2DO14686 5537 aa9.72□□□□□ -0.85
MIR3960-201ENST00000583311 RPS28P62857 69 aaKnown RBP9.69□□□□□ -0.86
MIR3960-201ENST00000583311 PSPHP1O15172 72 aa9.66□□□□□ -0.86
MIR3960-201ENST00000583311 MIR22HGQ0VDD5 57 aa9.63□□□□□ -0.87
MIR3960-201ENST00000583311 KRTAP4-8A0A0G2JLE6 195 aa9.62□□□□□ -0.87
MIR3960-201ENST00000583311 KRTAP4-8Q9BYQ9 185 aa9.62□□□□□ -0.87
MIR3960-201ENST00000583311 SPRR2FQ96RM1 72 aa9.59□□□□□ -0.87
MIR3960-201ENST00000583311 MUC12Q9UKN1 5478 aa9.56□□□□□ -0.88
MIR3960-201ENST00000583311 K7ERS5 55 aa9.44□□□□□ -0.9
MIR3960-201ENST00000583311 NEBP20929 6669 aa9.44□□□□□ -0.9
MIR3960-201ENST00000583311 A6NED7 52 aa9.42□□□□□ -0.9
MIR3960-201ENST00000583311 MDN1Q9NU22 5596 aa9.41□□□□□ -0.9
MIR3960-201ENST00000583311 C10orf95Q9H7T3 257 aa9.39□□□□□ -0.91
MIR3960-201ENST00000583311 TNP1P09430 55 aa9.37□□□□□ -0.91
MIR3960-201ENST00000583311 SPRR2EP22531 72 aa9.34□□□□□ -0.91
MIR3960-201ENST00000583311 SPRR2BP35325 72 aa9.34□□□□□ -0.91
MIR3960-201ENST00000583311 SPRR2AP35326 72 aa9.34□□□□□ -0.91
MIR3960-201ENST00000583311 LCE1AQ5T7P2 110 aa9.25□□□□□ -0.93
MIR3960-201ENST00000583311 KRTAP19-7Q3SYF9 63 aa9.14□□□□□ -0.95
MIR3960-201ENST00000583311 KRTAP20-1Q3LI63 56 aa9.08□□□□□ -0.96
MIR3960-201ENST00000583311 CDC42SE1Q9NRR8 79 aa9.08□□□□□ -0.96
MIR3960-201ENST00000583311 LCE3AQ5TA76 89 aa9.07□□□□□ -0.96
MIR3960-201ENST00000583311 MT1EP04732 61 aa9.06□□□□□ -0.96
MIR3960-201ENST00000583311 KRTAP25-1Q3LHN0 102 aa9.06□□□□□ -0.96
MIR3960-201ENST00000583311 KRTAP19-5Q3LI72 72 aa9.05□□□□□ -0.96
MIR3960-201ENST00000583311 SPRR2DP22532 72 aa9.03□□□□□ -0.96
MIR3960-201ENST00000583311 KRTAP2-3P0C7H8 128 aa8.98□□□□□ -0.97
MIR3960-201ENST00000583311 KRTAP2-4Q9BYR9 128 aa8.98□□□□□ -0.97
MIR3960-201ENST00000583311 KRTAP19-3Q7Z4W3 81 aa8.91□□□□□ -0.98
MIR3960-201ENST00000583311 LCE5AQ5TCM9 118 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms