RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 LCA10Q71F78 164 aa4.61□□□□□ -1.67
RFFL-210ENST00000582308 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.67
RFFL-210ENST00000582308 KRTAP3-3Q9BYR6 98 aa4.59□□□□□ -1.67
RFFL-210ENST00000582308 ACYP2P14621 99 aa4.58□□□□□ -1.68
RFFL-210ENST00000582308 LORP23490 312 aaPredicted RBP4.57□□□□□ -1.68
RFFL-210ENST00000582308 CSAG1Q6PB30 78 aa4.54□□□□□ -1.68
RFFL-210ENST00000582308 KRTAP9-8Q9BYQ0 159 aa4.54□□□□□ -1.68
RFFL-210ENST00000582308 MT2AP02795 61 aa4.49□□□□□ -1.69
RFFL-210ENST00000582308 COA5Q86WW8 74 aa4.49□□□□□ -1.69
RFFL-210ENST00000582308 CHKB-CPT1BH3BT56 60 aa4.48□□□□□ -1.69
RFFL-210ENST00000582308 ATP5EP56381 51 aaPredicted RBP4.48□□□□□ -1.69
RFFL-210ENST00000582308 TMEM258P61165 79 aa4.48□□□□□ -1.69
RFFL-210ENST00000582308 MT1FP04733 61 aa4.46□□□□□ -1.7
RFFL-210ENST00000582308 KRTAP10-10P60014 251 aa4.44□□□□□ -1.7
RFFL-210ENST00000582308 SPTSSBQ8NFR3 76 aa4.43□□□□□ -1.7
RFFL-210ENST00000582308 H0YAA0 97 aa4.41□□□□□ -1.7
RFFL-210ENST00000582308 ADM2Q7Z4H4 148 aa4.4□□□□□ -1.71
RFFL-210ENST00000582308 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
RFFL-210ENST00000582308 KRTAP3-2Q9BYR7 98 aa4.38□□□□□ -1.71
RFFL-210ENST00000582308 P0C880 135 aa4.36□□□□□ -1.71
RFFL-210ENST00000582308 LCE2DQ5TA82 110 aaPredicted RBP4.35□□□□□ -1.71
RFFL-210ENST00000582308 SERP1Q9Y6X1 66 aa4.35□□□□□ -1.71
RFFL-210ENST00000582308 KRTAP19-1Q8IUB9 90 aa4.31□□□□□ -1.72
RFFL-210ENST00000582308 LCE2BO14633 110 aa4.3□□□□□ -1.72
RFFL-210ENST00000582308 KRTAP9-2Q9BYQ4 174 aa4.3□□□□□ -1.72
RFFL-210ENST00000582308 CRIPTQ9P021 101 aa4.3□□□□□ -1.72
RFFL-210ENST00000582308 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
RFFL-210ENST00000582308 SEC61GP60059 68 aa4.26□□□□□ -1.73
RFFL-210ENST00000582308 RPS28P62857 69 aaKnown RBP4.25□□□□□ -1.73
RFFL-210ENST00000582308 LINC01558Q9Y6Z2 57 aa4.25□□□□□ -1.73
RFFL-210ENST00000582308 A0A1B0GU69 56 aa4.23□□□□□ -1.73
RFFL-210ENST00000582308 R4GN34 69 aa4.23□□□□□ -1.73
RFFL-210ENST00000582308 USH2AO75445 5202 aa4.23□□□□□ -1.73
RFFL-210ENST00000582308 M0QZ58 72 aa4.22□□□□□ -1.73
RFFL-210ENST00000582308 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
RFFL-210ENST00000582308 SMIM26A0A096LP01 95 aa4.2□□□□□ -1.74
RFFL-210ENST00000582308 KRTAP13-4Q3LI77 160 aa4.2□□□□□ -1.74
RFFL-210ENST00000582308 A0A1B0GU33 70 aa4.19□□□□□ -1.74
RFFL-210ENST00000582308 MT1BP07438 61 aa4.18□□□□□ -1.74
RFFL-210ENST00000582308 Q1T7F1 81 aa4.18□□□□□ -1.74
RFFL-210ENST00000582308 PRR15LQ9BU68 103 aa4.18□□□□□ -1.74
RFFL-210ENST00000582308 Q5VV11 94 aa4.16□□□□□ -1.74
RFFL-210ENST00000582308 V9GYY9 64 aa4.16□□□□□ -1.74
RFFL-210ENST00000582308 LINC01554Q52M75 96 aa4.15□□□□□ -1.75
RFFL-210ENST00000582308 SPATA8Q6RVD6 105 aa4.14□□□□□ -1.75
RFFL-210ENST00000582308 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
RFFL-210ENST00000582308 PSPHP1O15172 72 aa4.12□□□□□ -1.75
RFFL-210ENST00000582308 CRCT1Q9UGL9 99 aa4.11□□□□□ -1.75
RFFL-210ENST00000582308 SSPOA2VEC9 5147 aa4.1□□□□□ -1.75
RFFL-210ENST00000582308 A0A0D9SG42 100 aa4.08□□□□□ -1.76
RFFL-210ENST00000582308 A6NN06 94 aa4.07□□□□□ -1.76
RFFL-210ENST00000582308 KRTAP19-6Q3LI70 58 aa4.07□□□□□ -1.76
RFFL-210ENST00000582308 PLAC4Q8WY50 150 aa4.07□□□□□ -1.76
RFFL-210ENST00000582308 A8MU10 97 aa4.06□□□□□ -1.76
RFFL-210ENST00000582308 UQCR11O14957 56 aa4.06□□□□□ -1.76
RFFL-210ENST00000582308 KRTAP9-6A0A140TA67 174 aa4.05□□□□□ -1.76
RFFL-210ENST00000582308 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
RFFL-210ENST00000582308 KRTAP10-5P60370 271 aa4.01□□□□□ -1.77
RFFL-210ENST00000582308 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
RFFL-210ENST00000582308 FCGBPQ9Y6R7 5405 aaPredicted RBP4.01□□□□□ -1.77
RFFL-210ENST00000582308 KRTAP12-2P59991 146 aa4□□□□□ -1.77
RFFL-210ENST00000582308 A6NED7 52 aa3.99□□□□□ -1.77
RFFL-210ENST00000582308 MT1XP80297 61 aa3.99□□□□□ -1.77
RFFL-210ENST00000582308 SPINT4Q6UDR6 99 aa3.99□□□□□ -1.77
RFFL-210ENST00000582308 CAMK2N1Q7Z7J9 78 aa3.94□□□□□ -1.78
RFFL-210ENST00000582308 PRO2289Q9P1D8 64 aa3.94□□□□□ -1.78
RFFL-210ENST00000582308 CDC42SE1Q9NRR8 79 aa3.89□□□□□ -1.79
RFFL-210ENST00000582308 K7ERS5 55 aa3.84□□□□□ -1.79
RFFL-210ENST00000582308 C10orf95Q9H7T3 257 aa3.83□□□□□ -1.8
RFFL-210ENST00000582308 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
RFFL-210ENST00000582308 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
RFFL-210ENST00000582308 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
RFFL-210ENST00000582308 BRK1Q8WUW1 75 aa3.77□□□□□ -1.81
RFFL-210ENST00000582308 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
RFFL-210ENST00000582308 KMT2DO14686 5537 aa3.75□□□□□ -1.81
RFFL-210ENST00000582308 KRTAP4-8A0A0G2JLE6 195 aa3.74□□□□□ -1.81
RFFL-210ENST00000582308 KRTAP4-8Q9BYQ9 185 aa3.74□□□□□ -1.81
RFFL-210ENST00000582308 PRO0628Q9UI54 55 aa3.72□□□□□ -1.81
RFFL-210ENST00000582308 TNP1P09430 55 aa3.71□□□□□ -1.82
RFFL-210ENST00000582308 KRTAP9-7A8MTY7 169 aa3.67□□□□□ -1.82
RFFL-210ENST00000582308 ROMO1P60602 79 aa3.67□□□□□ -1.82
RFFL-210ENST00000582308 KRTAP8-1Q8IUC2 63 aa3.67□□□□□ -1.82
RFFL-210ENST00000582308 KRTAP25-1Q3LHN0 102 aa3.66□□□□□ -1.82
RFFL-210ENST00000582308 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
RFFL-210ENST00000582308 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.83
RFFL-210ENST00000582308 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
RFFL-210ENST00000582308 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
RFFL-210ENST00000582308 SPRR2FQ96RM1 72 aa3.59□□□□□ -1.83
RFFL-210ENST00000582308 PMAIP1Q13794 54 aa3.57□□□□□ -1.84
RFFL-210ENST00000582308 KRTAP19-7Q3SYF9 63 aa3.57□□□□□ -1.84
RFFL-210ENST00000582308 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
RFFL-210ENST00000582308 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
RFFL-210ENST00000582308 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
RFFL-210ENST00000582308 MT1EP04732 61 aa3.51□□□□□ -1.85
RFFL-210ENST00000582308 SVIPQ8NHG7 77 aa3.5□□□□□ -1.85
RFFL-210ENST00000582308 MDN1Q9NU22 5596 aa3.49□□□□□ -1.85
RFFL-210ENST00000582308 KRTAP12-3P60328 96 aa3.48□□□□□ -1.85
RFFL-210ENST00000582308 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
RFFL-210ENST00000582308 SPRR2EP22531 72 aa3.46□□□□□ -1.86
RFFL-210ENST00000582308 SPRR2BP35325 72 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms