RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 LCE2BO14633 110 aa7.68□□□□□ -1.18
RNF43-206ENST00000582293 TRAV7A0A075B6U4 112 aa7.66□□□□□ -1.18
RNF43-206ENST00000582293 CRCT1Q9UGL9 99 aa7.66□□□□□ -1.18
RNF43-206ENST00000582293 CSAG1Q6PB30 78 aa7.63□□□□□ -1.19
RNF43-206ENST00000582293 SMIM20Q8N5G0 67 aa7.63□□□□□ -1.19
RNF43-206ENST00000582293 A8MUN3 132 aa7.61□□□□□ -1.19
RNF43-206ENST00000582293 SSPOA2VEC9 5147 aa7.59□□□□□ -1.19
RNF43-206ENST00000582293 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
RNF43-206ENST00000582293 SERP2Q8N6R1 65 aa7.5□□□□□ -1.21
RNF43-206ENST00000582293 SNURFQ9Y675 71 aa7.5□□□□□ -1.21
RNF43-206ENST00000582293 NDUFC1O43677 76 aa7.49□□□□□ -1.21
RNF43-206ENST00000582293 KRTAP19-1Q8IUB9 90 aa7.49□□□□□ -1.21
RNF43-206ENST00000582293 C20orf197Q8N268 126 aa7.45□□□□□ -1.22
RNF43-206ENST00000582293 H0YAA0 97 aa7.42□□□□□ -1.22
RNF43-206ENST00000582293 SPRR2GQ9BYE4 73 aa7.4□□□□□ -1.22
RNF43-206ENST00000582293 ACYP2P14621 99 aa7.35□□□□□ -1.23
RNF43-206ENST00000582293 COX7CP15954 63 aa7.35□□□□□ -1.23
RNF43-206ENST00000582293 ADM2Q7Z4H4 148 aa7.34□□□□□ -1.23
RNF43-206ENST00000582293 SPANXA2-OT1Q8N9U9 137 aa7.34□□□□□ -1.23
RNF43-206ENST00000582293 FCGBPQ9Y6R7 5405 aaPredicted RBP7.33□□□□□ -1.24
RNF43-206ENST00000582293 MT1BP07438 61 aa7.32□□□□□ -1.24
RNF43-206ENST00000582293 KRTAP19-8Q3LI54 63 aa7.32□□□□□ -1.24
RNF43-206ENST00000582293 KRTAP19-6Q3LI70 58 aa7.32□□□□□ -1.24
RNF43-206ENST00000582293 CYSTM1Q9H1C7 97 aa7.31□□□□□ -1.24
RNF43-206ENST00000582293 ANAPC13Q9BS18 74 aa7.29□□□□□ -1.24
RNF43-206ENST00000582293 CRIPTQ9P021 101 aa7.29□□□□□ -1.24
RNF43-206ENST00000582293 KRTAP3-2Q9BYR7 98 aa7.28□□□□□ -1.24
RNF43-206ENST00000582293 P0C880 135 aa7.26□□□□□ -1.25
RNF43-206ENST00000582293 H7BZZ5 65 aa7.22□□□□□ -1.25
RNF43-206ENST00000582293 Q5VV11 94 aa7.22□□□□□ -1.25
RNF43-206ENST00000582293 CHKB-CPT1BH3BT56 60 aa7.18□□□□□ -1.26
RNF43-206ENST00000582293 SPTSSBQ8NFR3 76 aa7.16□□□□□ -1.26
RNF43-206ENST00000582293 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.14□□□□□ -1.27
RNF43-206ENST00000582293 CCDC179H3BU77 68 aa7.13□□□□□ -1.27
RNF43-206ENST00000582293 COA5Q86WW8 74 aa7.13□□□□□ -1.27
RNF43-206ENST00000582293 MACF1Q9UPN3 7388 aaKnown RBP7.1□□□□□ -1.27
RNF43-206ENST00000582293 R4GN34 69 aa7.09□□□□□ -1.27
RNF43-206ENST00000582293 M0QZ58 72 aa7.07□□□□□ -1.28
RNF43-206ENST00000582293 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
RNF43-206ENST00000582293 A6NN06 94 aa7.03□□□□□ -1.28
RNF43-206ENST00000582293 RPS28P62857 69 aaKnown RBP7□□□□□ -1.29
RNF43-206ENST00000582293 SYNE2Q8WXH0 6885 aaKnown RBP6.97□□□□□ -1.29
RNF43-206ENST00000582293 TMEM258P61165 79 aa6.97□□□□□ -1.29
RNF43-206ENST00000582293 KRTAP9-7A8MTY7 169 aa6.95□□□□□ -1.3
RNF43-206ENST00000582293 KRTAP13-4Q3LI77 160 aa6.93□□□□□ -1.3
RNF43-206ENST00000582293 LINC01554Q52M75 96 aa6.93□□□□□ -1.3
RNF43-206ENST00000582293 MT1XP80297 61 aa6.91□□□□□ -1.3
RNF43-206ENST00000582293 PLAC4Q8WY50 150 aa6.9□□□□□ -1.3
RNF43-206ENST00000582293 ATP5EP56381 51 aaPredicted RBP6.86□□□□□ -1.31
RNF43-206ENST00000582293 SERP1Q9Y6X1 66 aa6.8□□□□□ -1.32
RNF43-206ENST00000582293 SEC61GP60059 68 aa6.79□□□□□ -1.32
RNF43-206ENST00000582293 SVIPQ8NHG7 77 aa6.79□□□□□ -1.32
RNF43-206ENST00000582293 PRO2289Q9P1D8 64 aa6.78□□□□□ -1.32
RNF43-206ENST00000582293 KRTAP6-3Q3LI67 103 aa6.76□□□□□ -1.33
RNF43-206ENST00000582293 A0A1B0GU33 70 aa6.74□□□□□ -1.33
RNF43-206ENST00000582293 SPATA8Q6RVD6 105 aa6.73□□□□□ -1.33
RNF43-206ENST00000582293 A0A1B0GU69 56 aa6.71□□□□□ -1.34
RNF43-206ENST00000582293 KMT2DO14686 5537 aa6.66□□□□□ -1.34
RNF43-206ENST00000582293 A0A0D9SG42 100 aa6.65□□□□□ -1.34
RNF43-206ENST00000582293 KRTAP12-2P59991 146 aa6.65□□□□□ -1.34
RNF43-206ENST00000582293 LINC01558Q9Y6Z2 57 aa6.65□□□□□ -1.34
RNF43-206ENST00000582293 SMIM26A0A096LP01 95 aa6.62□□□□□ -1.35
RNF43-206ENST00000582293 KRTAP10-7P60409 375 aaPredicted RBP6.61□□□□□ -1.35
RNF43-206ENST00000582293 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
RNF43-206ENST00000582293 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
RNF43-206ENST00000582293 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
RNF43-206ENST00000582293 MUC12Q9UKN1 5478 aa6.55□□□□□ -1.36
RNF43-206ENST00000582293 A8MU10 97 aa6.55□□□□□ -1.36
RNF43-206ENST00000582293 KRTAP4-8A0A0G2JLE6 195 aa6.54□□□□□ -1.36
RNF43-206ENST00000582293 CAMK2N1Q7Z7J9 78 aa6.54□□□□□ -1.36
RNF43-206ENST00000582293 PRR15LQ9BU68 103 aa6.54□□□□□ -1.36
RNF43-206ENST00000582293 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
RNF43-206ENST00000582293 SPINT4Q6UDR6 99 aa6.52□□□□□ -1.37
RNF43-206ENST00000582293 NEBP20929 6669 aa6.51□□□□□ -1.37
RNF43-206ENST00000582293 KRTAP8-1Q8IUC2 63 aa6.46□□□□□ -1.38
RNF43-206ENST00000582293 Q1T7F1 81 aa6.44□□□□□ -1.38
RNF43-206ENST00000582293 V9GYY9 64 aa6.42□□□□□ -1.38
RNF43-206ENST00000582293 SPRR2FQ96RM1 72 aa6.41□□□□□ -1.38
RNF43-206ENST00000582293 MDN1Q9NU22 5596 aa6.4□□□□□ -1.38
RNF43-206ENST00000582293 UQCR11O14957 56 aa6.37□□□□□ -1.39
RNF43-206ENST00000582293 PRO0628Q9UI54 55 aa6.35□□□□□ -1.39
RNF43-206ENST00000582293 PSPHP1O15172 72 aa6.33□□□□□ -1.4
RNF43-206ENST00000582293 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
RNF43-206ENST00000582293 MIR22HGQ0VDD5 57 aa6.27□□□□□ -1.41
RNF43-206ENST00000582293 LCE1AQ5T7P2 110 aa6.26□□□□□ -1.41
RNF43-206ENST00000582293 SPRR2EP22531 72 aa6.25□□□□□ -1.41
RNF43-206ENST00000582293 SPRR2BP35325 72 aa6.25□□□□□ -1.41
RNF43-206ENST00000582293 SPRR2AP35326 72 aa6.25□□□□□ -1.41
RNF43-206ENST00000582293 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
RNF43-206ENST00000582293 BRK1Q8WUW1 75 aa6.14□□□□□ -1.43
RNF43-206ENST00000582293 TNP1P09430 55 aa6.11□□□□□ -1.43
RNF43-206ENST00000582293 MT1EP04732 61 aa6.1□□□□□ -1.43
RNF43-206ENST00000582293 A6NED7 52 aa6.09□□□□□ -1.43
RNF43-206ENST00000582293 KRTAP20-1Q3LI63 56 aa6.09□□□□□ -1.43
RNF43-206ENST00000582293 KRTAP19-5Q3LI72 72 aa6.07□□□□□ -1.44
RNF43-206ENST00000582293 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
RNF43-206ENST00000582293 SPRR2DP22532 72 aa6.03□□□□□ -1.44
RNF43-206ENST00000582293 KRTAP2-3P0C7H8 128 aa6.02□□□□□ -1.45
RNF43-206ENST00000582293 KRTAP2-4Q9BYR9 128 aa6.02□□□□□ -1.45
RNF43-206ENST00000582293 CDC42SE1Q9NRR8 79 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 271.2 ms