RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 K7EQZ3 153 aa5.45□□□□□ -1.54
SS18-219ENST00000581570 HSD52Q0P140 79 aa5.45□□□□□ -1.54
SS18-219ENST00000581570 KRTAP8-1Q8IUC2 63 aa5.45□□□□□ -1.54
SS18-219ENST00000581570 PDE6GP18545 87 aa5.44□□□□□ -1.54
SS18-219ENST00000581570 S100A1P23297 94 aa5.43□□□□□ -1.54
SS18-219ENST00000581570 CRIPTQ9P021 101 aa5.43□□□□□ -1.54
SS18-219ENST00000581570 C1orf64Q8NEQ6 169 aa5.41□□□□□ -1.54
SS18-219ENST00000581570 HCG22E2RYF7 251 aa5.39□□□□□ -1.55
SS18-219ENST00000581570 C14orf132Q9NPU4 83 aa5.39□□□□□ -1.55
SS18-219ENST00000581570 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
SS18-219ENST00000581570 CXCL6P80162 114 aa5.35□□□□□ -1.55
SS18-219ENST00000581570 ATXN8Q156A1 80 aa5.35□□□□□ -1.55
SS18-219ENST00000581570 CASC2Q6XLA1 102 aa5.35□□□□□ -1.55
SS18-219ENST00000581570 MT1XP80297 61 aa5.34□□□□□ -1.55
SS18-219ENST00000581570 BPY2O14599 106 aa5.33□□□□□ -1.56
SS18-219ENST00000581570 GPR98Q8WXG9 6306 aa5.33□□□□□ -1.56
SS18-219ENST00000581570 SVIPQ8NHG7 77 aa5.31□□□□□ -1.56
SS18-219ENST00000581570 KRTAP12-2P59991 146 aa5.29□□□□□ -1.56
SS18-219ENST00000581570 Q8N9L7 120 aa5.29□□□□□ -1.56
SS18-219ENST00000581570 PLAC4Q8WY50 150 aa5.24□□□□□ -1.57
SS18-219ENST00000581570 NAA38Q9BRA0 125 aaKnown RBP5.24□□□□□ -1.57
SS18-219ENST00000581570 UQCR10Q9UDW1 63 aa5.24□□□□□ -1.57
SS18-219ENST00000581570 A8MUN3 132 aa5.23□□□□□ -1.57
SS18-219ENST00000581570 A0A087WVE0 104 aa5.22□□□□□ -1.57
SS18-219ENST00000581570 H0YAA0 97 aa5.19□□□□□ -1.58
SS18-219ENST00000581570 PYY3Q5JQD4 70 aa5.19□□□□□ -1.58
SS18-219ENST00000581570 ADM2Q7Z4H4 148 aa5.14□□□□□ -1.59
SS18-219ENST00000581570 NDUFC1O43677 76 aa5.13□□□□□ -1.59
SS18-219ENST00000581570 TP53AIP1Q9HCN2 124 aa5.12□□□□□ -1.59
SS18-219ENST00000581570 CYP4F30PQ9H0H9 118 aa5.11□□□□□ -1.59
SS18-219ENST00000581570 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.59
SS18-219ENST00000581570 TSTD3H0UI37 97 aa5.09□□□□□ -1.59
SS18-219ENST00000581570 H3BT86 120 aa5.09□□□□□ -1.59
SS18-219ENST00000581570 KRTAP10-7P60409 375 aaPredicted RBP5.09□□□□□ -1.59
SS18-219ENST00000581570 M0R143 59 aa5.08□□□□□ -1.6
SS18-219ENST00000581570 KRTAP10-12P60413 245 aa5.06□□□□□ -1.6
SS18-219ENST00000581570 R4GN34 69 aa5.05□□□□□ -1.6
SS18-219ENST00000581570 K7EP34 96 aa5.04□□□□□ -1.6
SS18-219ENST00000581570 UBL5Q9BZL1 73 aa5.03□□□□□ -1.6
SS18-219ENST00000581570 LOC101927531A0A1B0GV80 90 aa4.99□□□□□ -1.61
SS18-219ENST00000581570 M0QZ58 72 aa4.99□□□□□ -1.61
SS18-219ENST00000581570 TRAV22A0A0B4J277 110 aa4.96□□□□□ -1.62
SS18-219ENST00000581570 ACYP1P07311 99 aa4.96□□□□□ -1.62
SS18-219ENST00000581570 P0C880 135 aa4.96□□□□□ -1.62
SS18-219ENST00000581570 LINC01554Q52M75 96 aa4.95□□□□□ -1.62
SS18-219ENST00000581570 C20orf197Q8N268 126 aa4.93□□□□□ -1.62
SS18-219ENST00000581570 PCP4P48539 62 aa4.9□□□□□ -1.63
SS18-219ENST00000581570 BATFQ16520 125 aa4.9□□□□□ -1.63
SS18-219ENST00000581570 A0A1W2PPM0 123 aa4.89□□□□□ -1.63
SS18-219ENST00000581570 SPCS1Q9Y6A9 102 aa4.89□□□□□ -1.63
SS18-219ENST00000581570 TAX1BP3O14907 124 aa4.83□□□□□ -1.64
SS18-219ENST00000581570 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
SS18-219ENST00000581570 AHNAK2Q8IVF2 5795 aa4.82□□□□□ -1.64
SS18-219ENST00000581570 H0Y9P7 68 aa4.82□□□□□ -1.64
SS18-219ENST00000581570 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
SS18-219ENST00000581570 ATOX1O00244 68 aa4.81□□□□□ -1.64
SS18-219ENST00000581570 MT4P47944 62 aa4.81□□□□□ -1.64
SS18-219ENST00000581570 UQCRQO14949 82 aa4.8□□□□□ -1.64
SS18-219ENST00000581570 KRTAP5-10Q6L8G5 202 aa4.79□□□□□ -1.64
SS18-219ENST00000581570 KRTAP19-7Q3SYF9 63 aa4.77□□□□□ -1.65
SS18-219ENST00000581570 MT-ATP8P03928 68 aa4.76□□□□□ -1.65
SS18-219ENST00000581570 MT1EP04732 61 aa4.76□□□□□ -1.65
SS18-219ENST00000581570 A0A0A0MQY5 61 aa4.75□□□□□ -1.65
SS18-219ENST00000581570 CYSTM1Q9H1C7 97 aa4.75□□□□□ -1.65
SS18-219ENST00000581570 PRO0461Q9UI25 63 aa4.73□□□□□ -1.65
SS18-219ENST00000581570 LINC00208Q96KT6 92 aa4.71□□□□□ -1.66
SS18-219ENST00000581570 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
SS18-219ENST00000581570 MT1GP13640 62 aa4.66□□□□□ -1.66
SS18-219ENST00000581570 SMIM6P0DI80 62 aa4.65□□□□□ -1.67
SS18-219ENST00000581570 HIST1H4AP62805 103 aaKnown RBP4.64□□□□□ -1.67
SS18-219ENST00000581570 PP632Q6XCG6 107 aa4.62□□□□□ -1.67
SS18-219ENST00000581570 DMAC1Q96GE9 116 aa4.61□□□□□ -1.67
SS18-219ENST00000581570 MP68P56378 58 aa4.6□□□□□ -1.67
SS18-219ENST00000581570 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
SS18-219ENST00000581570 CAMK2N1Q7Z7J9 78 aa4.58□□□□□ -1.68
SS18-219ENST00000581570 ETDBQ3ZM63 59 aa4.57□□□□□ -1.68
SS18-219ENST00000581570 ATP5EP2Q5VTU8 51 aa4.56□□□□□ -1.68
SS18-219ENST00000581570 MT1MQ8N339 61 aa4.56□□□□□ -1.68
SS18-219ENST00000581570 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
SS18-219ENST00000581570 SPRR5A0A1B0GTR4 108 aa4.52□□□□□ -1.69
SS18-219ENST00000581570 F8W1H4 67 aa4.52□□□□□ -1.69
SS18-219ENST00000581570 MT3P25713 68 aa4.51□□□□□ -1.69
SS18-219ENST00000581570 OCR1Q9BZK8 76 aa4.51□□□□□ -1.69
SS18-219ENST00000581570 TRAV7A0A075B6U4 112 aa4.5□□□□□ -1.69
SS18-219ENST00000581570 COL5A1-AS1Q5SY13 56 aa4.5□□□□□ -1.69
SS18-219ENST00000581570 A0A0D9SG42 100 aa4.49□□□□□ -1.69
SS18-219ENST00000581570 GTF2H5Q6ZYL4 71 aa4.48□□□□□ -1.69
SS18-219ENST00000581570 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
SS18-219ENST00000581570 H3BPC8 53 aa4.47□□□□□ -1.69
SS18-219ENST00000581570 SPTSSBQ8NFR3 76 aa4.47□□□□□ -1.69
SS18-219ENST00000581570 MT1LQ93083 61 aa4.47□□□□□ -1.69
SS18-219ENST00000581570 KRTAP13-4Q3LI77 160 aa4.44□□□□□ -1.7
SS18-219ENST00000581570 ACYP2P14621 99 aa4.43□□□□□ -1.7
SS18-219ENST00000581570 FAM240AA0A1B0GVK7 77 aa4.42□□□□□ -1.7
SS18-219ENST00000581570 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
SS18-219ENST00000581570 LINC00643Q86TS7 51 aa4.37□□□□□ -1.71
SS18-219ENST00000581570 CHKB-CPT1BH3BT56 60 aa4.35□□□□□ -1.71
SS18-219ENST00000581570 C10orf95Q9H7T3 257 aa4.27□□□□□ -1.73
SS18-219ENST00000581570 SCGB1A1P11684 91 aa4.26□□□□□ -1.73
SS18-219ENST00000581570 LOC105371267A0A1B0GV96 52 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms