RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 KRTAP9-6A0A140TA67 174 aa9.17□□□□□ -0.94
EIF4A1-216ENST00000580888 KRTAP19-2Q3LHN2 52 aa9.17□□□□□ -0.94
EIF4A1-216ENST00000580888 COX6B2Q6YFQ2 88 aa9.16□□□□□ -0.94
EIF4A1-216ENST00000580888 V9GYY9 64 aa9.14□□□□□ -0.95
EIF4A1-216ENST00000580888 LCE2DQ5TA82 110 aaPredicted RBP9.13□□□□□ -0.95
EIF4A1-216ENST00000580888 MPLKIPQ8TAP9 179 aa9.11□□□□□ -0.95
EIF4A1-216ENST00000580888 CHKB-CPT1BH3BT56 60 aa9.08□□□□□ -0.96
EIF4A1-216ENST00000580888 LINC01558Q9Y6Z2 57 aa9.08□□□□□ -0.96
EIF4A1-216ENST00000580888 MT1HP80294 61 aa9.06□□□□□ -0.96
EIF4A1-216ENST00000580888 FLGP20930 4061 aaPredicted RBP9.01□□□□□ -0.97
EIF4A1-216ENST00000580888 FSIP2Q5CZC0 6907 aa8.96□□□□□ -0.97
EIF4A1-216ENST00000580888 Q5VV11 94 aa8.94□□□□□ -0.98
EIF4A1-216ENST00000580888 LORP23490 312 aaPredicted RBP8.93□□□□□ -0.98
EIF4A1-216ENST00000580888 SPTSSBQ8NFR3 76 aa8.93□□□□□ -0.98
EIF4A1-216ENST00000580888 PSPHP1O15172 72 aa8.92□□□□□ -0.98
EIF4A1-216ENST00000580888 KRTAP10-6P60371 365 aaPredicted RBP8.91□□□□□ -0.98
EIF4A1-216ENST00000580888 PRR15LQ9BU68 103 aa8.91□□□□□ -0.98
EIF4A1-216ENST00000580888 CRCT1Q9UGL9 99 aa8.9□□□□□ -0.98
EIF4A1-216ENST00000580888 H1FX-AS1Q4G0G2 97 aa8.88□□□□□ -0.99
EIF4A1-216ENST00000580888 KRTAP3-3Q9BYR6 98 aa8.87□□□□□ -0.99
EIF4A1-216ENST00000580888 RBM12B-AS1Q9P1G2 102 aa8.86□□□□□ -0.99
EIF4A1-216ENST00000580888 M0R2T5 61 aa8.82□□□□□ -1
EIF4A1-216ENST00000580888 LCA10Q71F78 164 aa8.81□□□□□ -1
EIF4A1-216ENST00000580888 S4R3F8 94 aa8.8□□□□□ -1
EIF4A1-216ENST00000580888 A0A1B0GU69 56 aa8.79□□□□□ -1
EIF4A1-216ENST00000580888 SEC61GP60059 68 aa8.68□□□□□ -1.02
EIF4A1-216ENST00000580888 A6NED7 52 aa8.64□□□□□ -1.03
EIF4A1-216ENST00000580888 BRK1Q8WUW1 75 aa8.64□□□□□ -1.03
EIF4A1-216ENST00000580888 CSAG1Q6PB30 78 aa8.6□□□□□ -1.03
EIF4A1-216ENST00000580888 KRTAP3-2Q9BYR7 98 aa8.6□□□□□ -1.03
EIF4A1-216ENST00000580888 CDC42SE1Q9NRR8 79 aa8.6□□□□□ -1.03
EIF4A1-216ENST00000580888 PRO0628Q9UI54 55 aa8.6□□□□□ -1.03
EIF4A1-216ENST00000580888 UQCR11O14957 56 aa8.58□□□□□ -1.04
EIF4A1-216ENST00000580888 SPATA8Q6RVD6 105 aa8.57□□□□□ -1.04
EIF4A1-216ENST00000580888 KRTAP9-8Q9BYQ0 159 aa8.57□□□□□ -1.04
EIF4A1-216ENST00000580888 A8MU10 97 aa8.54□□□□□ -1.04
EIF4A1-216ENST00000580888 H0YAA0 97 aa8.53□□□□□ -1.04
EIF4A1-216ENST00000580888 USH2AO75445 5202 aa8.52□□□□□ -1.05
EIF4A1-216ENST00000580888 A0A1B0GU33 70 aa8.51□□□□□ -1.05
EIF4A1-216ENST00000580888 SSPOA2VEC9 5147 aa8.49□□□□□ -1.05
EIF4A1-216ENST00000580888 MIR22HGQ0VDD5 57 aa8.48□□□□□ -1.05
EIF4A1-216ENST00000580888 P0C880 135 aa8.43□□□□□ -1.06
EIF4A1-216ENST00000580888 MT2AP02795 61 aa8.42□□□□□ -1.06
EIF4A1-216ENST00000580888 ADM2Q7Z4H4 148 aa8.42□□□□□ -1.06
EIF4A1-216ENST00000580888 MT1FP04733 61 aa8.35□□□□□ -1.07
EIF4A1-216ENST00000580888 KRTAP13-4Q3LI77 160 aa8.33□□□□□ -1.08
EIF4A1-216ENST00000580888 KRTAP9-3Q9BYQ3 159 aa8.31□□□□□ -1.08
EIF4A1-216ENST00000580888 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.3□□□□□ -1.08
EIF4A1-216ENST00000580888 LCE2BO14633 110 aa8.29□□□□□ -1.08
EIF4A1-216ENST00000580888 FCGBPQ9Y6R7 5405 aaPredicted RBP8.27□□□□□ -1.09
EIF4A1-216ENST00000580888 M0QZ58 72 aa8.26□□□□□ -1.09
EIF4A1-216ENST00000580888 KRTAP10-10P60014 251 aa8.26□□□□□ -1.09
EIF4A1-216ENST00000580888 SVIPQ8NHG7 77 aa8.25□□□□□ -1.09
EIF4A1-216ENST00000580888 KRTAP9-7A8MTY7 169 aa8.24□□□□□ -1.09
EIF4A1-216ENST00000580888 A6NN06 94 aa8.23□□□□□ -1.09
EIF4A1-216ENST00000580888 PMAIP1Q13794 54 aa8.19□□□□□ -1.1
EIF4A1-216ENST00000580888 KRTAP19-1Q8IUB9 90 aa8.19□□□□□ -1.1
EIF4A1-216ENST00000580888 R4GN34 69 aa8.08□□□□□ -1.12
EIF4A1-216ENST00000580888 MACF1Q9UPN3 7388 aaKnown RBP8.07□□□□□ -1.12
EIF4A1-216ENST00000580888 A0A0D9SG42 100 aa8.07□□□□□ -1.12
EIF4A1-216ENST00000580888 CRIPTQ9P021 101 aa8.07□□□□□ -1.12
EIF4A1-216ENST00000580888 KRTAP19-6Q3LI70 58 aa8.05□□□□□ -1.12
EIF4A1-216ENST00000580888 K7ERS5 55 aa8.03□□□□□ -1.12
EIF4A1-216ENST00000580888 KRTAP12-1P59990 96 aa8.03□□□□□ -1.12
EIF4A1-216ENST00000580888 SYNE2Q8WXH0 6885 aaKnown RBP8.02□□□□□ -1.13
EIF4A1-216ENST00000580888 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
EIF4A1-216ENST00000580888 KTN1-AS1Q86SY8 53 aa7.94□□□□□ -1.14
EIF4A1-216ENST00000580888 SPRR2GQ9BYE4 73 aa7.9□□□□□ -1.14
EIF4A1-216ENST00000580888 LINC01554Q52M75 96 aa7.87□□□□□ -1.15
EIF4A1-216ENST00000580888 SPINT4Q6UDR6 99 aa7.87□□□□□ -1.15
EIF4A1-216ENST00000580888 ROMO1P60602 79 aa7.78□□□□□ -1.16
EIF4A1-216ENST00000580888 KRTAP6-3Q3LI67 103 aa7.75□□□□□ -1.17
EIF4A1-216ENST00000580888 KRTAP19-8Q3LI54 63 aa7.7□□□□□ -1.18
EIF4A1-216ENST00000580888 PRAC1Q96KF2 57 aa7.66□□□□□ -1.18
EIF4A1-216ENST00000580888 MT1BP07438 61 aa7.64□□□□□ -1.19
EIF4A1-216ENST00000580888 C10orf95Q9H7T3 257 aa7.6□□□□□ -1.19
EIF4A1-216ENST00000580888 NEBP20929 6669 aa7.58□□□□□ -1.2
EIF4A1-216ENST00000580888 CAMK2N1Q7Z7J9 78 aa7.55□□□□□ -1.2
EIF4A1-216ENST00000580888 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
EIF4A1-216ENST00000580888 KRTAP25-1Q3LHN0 102 aa7.52□□□□□ -1.21
EIF4A1-216ENST00000580888 KRTAP10-5P60370 271 aa7.5□□□□□ -1.21
EIF4A1-216ENST00000580888 MUC12Q9UKN1 5478 aa7.48□□□□□ -1.21
EIF4A1-216ENST00000580888 KRTAP5-9P26371 169 aa7.35□□□□□ -1.23
EIF4A1-216ENST00000580888 MT1XP80297 61 aa7.32□□□□□ -1.24
EIF4A1-216ENST00000580888 KMT2DO14686 5537 aa7.29□□□□□ -1.24
EIF4A1-216ENST00000580888 TNP1P09430 55 aa7.28□□□□□ -1.24
EIF4A1-216ENST00000580888 MDN1Q9NU22 5596 aa7.25□□□□□ -1.25
EIF4A1-216ENST00000580888 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
EIF4A1-216ENST00000580888 KRTAP20-1Q3LI63 56 aa7.2□□□□□ -1.26
EIF4A1-216ENST00000580888 PP632Q6XCG6 107 aa7.19□□□□□ -1.26
EIF4A1-216ENST00000580888 PRO2289Q9P1D8 64 aa7.15□□□□□ -1.26
EIF4A1-216ENST00000580888 SPRR2FQ96RM1 72 aa7.02□□□□□ -1.29
EIF4A1-216ENST00000580888 KRTAP2-3P0C7H8 128 aa7□□□□□ -1.29
EIF4A1-216ENST00000580888 KRTAP10-7P60409 375 aaPredicted RBP7□□□□□ -1.29
EIF4A1-216ENST00000580888 KRTAP2-4Q9BYR9 128 aa7□□□□□ -1.29
EIF4A1-216ENST00000580888 KRTAP10-12P60413 245 aa6.96□□□□□ -1.3
EIF4A1-216ENST00000580888 LCE3AQ5TA76 89 aa6.96□□□□□ -1.3
EIF4A1-216ENST00000580888 SPRR2EP22531 72 aa6.95□□□□□ -1.3
EIF4A1-216ENST00000580888 SPRR2BP35325 72 aa6.95□□□□□ -1.3
EIF4A1-216ENST00000580888 SPRR2AP35326 72 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms