RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 C4orf26Q17RF5 130 aa7.2□□□□□ -1.26
SKA2-205ENST00000580541 KRTAP19-2Q3LHN2 52 aa7.19□□□□□ -1.26
SKA2-205ENST00000580541 COX7CP15954 63 aa7.16□□□□□ -1.26
SKA2-205ENST00000580541 ANAPC13Q9BS18 74 aa7.16□□□□□ -1.26
SKA2-205ENST00000580541 H1FX-AS1Q4G0G2 97 aa7.15□□□□□ -1.26
SKA2-205ENST00000580541 C20orf197Q8N268 126 aa7.14□□□□□ -1.27
SKA2-205ENST00000580541 KLKP1Q107X0 134 aa7.13□□□□□ -1.27
SKA2-205ENST00000580541 A8MUN3 132 aa7.11□□□□□ -1.27
SKA2-205ENST00000580541 FAT4Q6V0I7 4981 aa7.11□□□□□ -1.27
SKA2-205ENST00000580541 M0R2T5 61 aa7.1□□□□□ -1.27
SKA2-205ENST00000580541 SNURFQ9Y675 71 aa7.1□□□□□ -1.27
SKA2-205ENST00000580541 MT1HP80294 61 aa7.08□□□□□ -1.28
SKA2-205ENST00000580541 NDUFC1O43677 76 aa7.06□□□□□ -1.28
SKA2-205ENST00000580541 KRTAP5-3Q6L8H2 238 aa7.06□□□□□ -1.28
SKA2-205ENST00000580541 FLGP20930 4061 aaPredicted RBP7.04□□□□□ -1.28
SKA2-205ENST00000580541 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
SKA2-205ENST00000580541 SPANXA2-OT1Q8N9U9 137 aa7.01□□□□□ -1.29
SKA2-205ENST00000580541 S4R3F8 94 aa7.01□□□□□ -1.29
SKA2-205ENST00000580541 DMAC1Q96GE9 116 aa6.99□□□□□ -1.29
SKA2-205ENST00000580541 ACYP2P14621 99 aa6.98□□□□□ -1.29
SKA2-205ENST00000580541 CSAG1Q6PB30 78 aa6.95□□□□□ -1.3
SKA2-205ENST00000580541 LCE4AQ5TA78 99 aa6.94□□□□□ -1.3
SKA2-205ENST00000580541 CCDC179H3BU77 68 aa6.92□□□□□ -1.3
SKA2-205ENST00000580541 LCA10Q71F78 164 aa6.92□□□□□ -1.3
SKA2-205ENST00000580541 H7BZZ5 65 aa6.91□□□□□ -1.3
SKA2-205ENST00000580541 KRTAP10-6P60371 365 aaPredicted RBP6.89□□□□□ -1.31
SKA2-205ENST00000580541 KRTAP9-8Q9BYQ0 159 aa6.88□□□□□ -1.31
SKA2-205ENST00000580541 CHKB-CPT1BH3BT56 60 aa6.86□□□□□ -1.31
SKA2-205ENST00000580541 SPTSSBQ8NFR3 76 aa6.86□□□□□ -1.31
SKA2-205ENST00000580541 CYSTM1Q9H1C7 97 aa6.84□□□□□ -1.31
SKA2-205ENST00000580541 ATP5EP56381 51 aaPredicted RBP6.82□□□□□ -1.32
SKA2-205ENST00000580541 LCE5AQ5TCM9 118 aa6.78□□□□□ -1.32
SKA2-205ENST00000580541 TMEM258P61165 79 aa6.77□□□□□ -1.33
SKA2-205ENST00000580541 PCP4P48539 62 aa6.74□□□□□ -1.33
SKA2-205ENST00000580541 COA5Q86WW8 74 aa6.74□□□□□ -1.33
SKA2-205ENST00000580541 KRTAP10-10P60014 251 aa6.73□□□□□ -1.33
SKA2-205ENST00000580541 H0YAA0 97 aa6.72□□□□□ -1.33
SKA2-205ENST00000580541 MT2AP02795 61 aa6.7□□□□□ -1.34
SKA2-205ENST00000580541 KRTAP9-7A8MTY7 169 aa6.68□□□□□ -1.34
SKA2-205ENST00000580541 KRTAP19-4Q3LI73 84 aa6.67□□□□□ -1.34
SKA2-205ENST00000580541 MT1FP04733 61 aa6.64□□□□□ -1.35
SKA2-205ENST00000580541 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
SKA2-205ENST00000580541 CRIPTQ9P021 101 aa6.61□□□□□ -1.35
SKA2-205ENST00000580541 SEC61GP60059 68 aa6.59□□□□□ -1.35
SKA2-205ENST00000580541 SERP1Q9Y6X1 66 aa6.56□□□□□ -1.36
SKA2-205ENST00000580541 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
SKA2-205ENST00000580541 P0C880 135 aa6.48□□□□□ -1.37
SKA2-205ENST00000580541 R4GN34 69 aa6.48□□□□□ -1.37
SKA2-205ENST00000580541 A0A1B0GU69 56 aa6.45□□□□□ -1.38
SKA2-205ENST00000580541 PRR15LQ9BU68 103 aa6.45□□□□□ -1.38
SKA2-205ENST00000580541 SPRR2GQ9BYE4 73 aa6.45□□□□□ -1.38
SKA2-205ENST00000580541 M0QZ58 72 aa6.42□□□□□ -1.38
SKA2-205ENST00000580541 RPS28P62857 69 aaKnown RBP6.41□□□□□ -1.38
SKA2-205ENST00000580541 LINC01558Q9Y6Z2 57 aa6.39□□□□□ -1.39
SKA2-205ENST00000580541 V9GYY9 64 aa6.39□□□□□ -1.39
SKA2-205ENST00000580541 CRCT1Q9UGL9 99 aa6.38□□□□□ -1.39
SKA2-205ENST00000580541 SMIM26A0A096LP01 95 aa6.36□□□□□ -1.39
SKA2-205ENST00000580541 A0A1B0GU33 70 aa6.35□□□□□ -1.39
SKA2-205ENST00000580541 Q5VV11 94 aa6.34□□□□□ -1.39
SKA2-205ENST00000580541 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
SKA2-205ENST00000580541 Q1T7F1 81 aa6.29□□□□□ -1.4
SKA2-205ENST00000580541 LINC01554Q52M75 96 aa6.29□□□□□ -1.4
SKA2-205ENST00000580541 FSIP2Q5CZC0 6907 aa6.28□□□□□ -1.4
SKA2-205ENST00000580541 PLAC4Q8WY50 150 aa6.26□□□□□ -1.41
SKA2-205ENST00000580541 A6NN06 94 aa6.21□□□□□ -1.42
SKA2-205ENST00000580541 MT1BP07438 61 aa6.21□□□□□ -1.42
SKA2-205ENST00000580541 UQCR11O14957 56 aa6.2□□□□□ -1.42
SKA2-205ENST00000580541 KRTAP13-4Q3LI77 160 aa6.19□□□□□ -1.42
SKA2-205ENST00000580541 SPATA8Q6RVD6 105 aa6.19□□□□□ -1.42
SKA2-205ENST00000580541 USH2AO75445 5202 aa6.18□□□□□ -1.42
SKA2-205ENST00000580541 PSPHP1O15172 72 aa6.17□□□□□ -1.42
SKA2-205ENST00000580541 A0A0D9SG42 100 aa6.14□□□□□ -1.43
SKA2-205ENST00000580541 KRTAP19-6Q3LI70 58 aa6.14□□□□□ -1.43
SKA2-205ENST00000580541 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
SKA2-205ENST00000580541 MIR22HGQ0VDD5 57 aa6.07□□□□□ -1.44
SKA2-205ENST00000580541 SPINT4Q6UDR6 99 aa6.06□□□□□ -1.44
SKA2-205ENST00000580541 A6NED7 52 aa6.04□□□□□ -1.44
SKA2-205ENST00000580541 CAMK2N1Q7Z7J9 78 aa6.04□□□□□ -1.44
SKA2-205ENST00000580541 SSPOA2VEC9 5147 aa6.03□□□□□ -1.44
SKA2-205ENST00000580541 A8MU10 97 aa6.02□□□□□ -1.45
SKA2-205ENST00000580541 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
SKA2-205ENST00000580541 KRTAP12-1P59990 96 aa5.99□□□□□ -1.45
SKA2-205ENST00000580541 K7ERS5 55 aa5.98□□□□□ -1.45
SKA2-205ENST00000580541 KRTAP12-2P59991 146 aa5.95□□□□□ -1.46
SKA2-205ENST00000580541 MT1XP80297 61 aa5.94□□□□□ -1.46
SKA2-205ENST00000580541 KRTAP23-1A1A580 65 aa5.93□□□□□ -1.46
SKA2-205ENST00000580541 FCGBPQ9Y6R7 5405 aaPredicted RBP5.88□□□□□ -1.47
SKA2-205ENST00000580541 CDC42SE1Q9NRR8 79 aa5.86□□□□□ -1.47
SKA2-205ENST00000580541 TNP1P09430 55 aa5.69□□□□□ -1.5
SKA2-205ENST00000580541 KRTAP10-12P60413 245 aa5.68□□□□□ -1.5
SKA2-205ENST00000580541 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
SKA2-205ENST00000580541 BRK1Q8WUW1 75 aa5.68□□□□□ -1.5
SKA2-205ENST00000580541 C10orf95Q9H7T3 257 aa5.68□□□□□ -1.5
SKA2-205ENST00000580541 MACF1Q9UPN3 7388 aaKnown RBP5.67□□□□□ -1.5
SKA2-205ENST00000580541 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
SKA2-205ENST00000580541 KRTAP25-1Q3LHN0 102 aa5.59□□□□□ -1.51
SKA2-205ENST00000580541 ROMO1P60602 79 aa5.57□□□□□ -1.52
SKA2-205ENST00000580541 KRTAP6-3Q3LI67 103 aa5.57□□□□□ -1.52
SKA2-205ENST00000580541 KRTAP8-1Q8IUC2 63 aa5.57□□□□□ -1.52
SKA2-205ENST00000580541 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms