RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 TPRXLQ17RH7 258 aa9.22□□□□□ -0.93
TMCO1-207ENST00000580248 COX6B2Q6YFQ2 88 aa9.22□□□□□ -0.93
TMCO1-207ENST00000580248 KRTAP3-1Q9BYR8 98 aa9.2□□□□□ -0.94
TMCO1-207ENST00000580248 A8MU10 97 aa9.16□□□□□ -0.94
TMCO1-207ENST00000580248 SEC61GP60059 68 aa9.14□□□□□ -0.95
TMCO1-207ENST00000580248 UQCR11O14957 56 aa9.11□□□□□ -0.95
TMCO1-207ENST00000580248 HMCN2Q8NDA2 5059 aa9.08□□□□□ -0.96
TMCO1-207ENST00000580248 LPAP08519 4548 aa9.07□□□□□ -0.96
TMCO1-207ENST00000580248 PMAIP1Q13794 54 aa9.07□□□□□ -0.96
TMCO1-207ENST00000580248 SPATA8Q6RVD6 105 aa9.07□□□□□ -0.96
TMCO1-207ENST00000580248 MIR22HGQ0VDD5 57 aa9.02□□□□□ -0.96
TMCO1-207ENST00000580248 LRP2P98164 4655 aa8.97□□□□□ -0.97
TMCO1-207ENST00000580248 A6NN06 94 aa8.95□□□□□ -0.98
TMCO1-207ENST00000580248 SEC61BP60468 96 aaKnown RBP8.91□□□□□ -0.98
TMCO1-207ENST00000580248 S4R3F8 94 aa8.89□□□□□ -0.99
TMCO1-207ENST00000580248 A0A1B0GU33 70 aa8.88□□□□□ -0.99
TMCO1-207ENST00000580248 KRTAP3-3Q9BYR6 98 aa8.87□□□□□ -0.99
TMCO1-207ENST00000580248 H1FX-AS1Q4G0G2 97 aa8.86□□□□□ -0.99
TMCO1-207ENST00000580248 KTN1-AS1Q86SY8 53 aa8.83□□□□□ -1
TMCO1-207ENST00000580248 RBM12B-AS1Q9P1G2 102 aa8.83□□□□□ -1
TMCO1-207ENST00000580248 MUC17Q685J3 4493 aa8.77□□□□□ -1
TMCO1-207ENST00000580248 H0YAA0 97 aa8.77□□□□□ -1.01
TMCO1-207ENST00000580248 KRTAP4-1Q9BYQ7 146 aa8.71□□□□□ -1.01
TMCO1-207ENST00000580248 UBR4Q5T4S7 5183 aa8.71□□□□□ -1.02
TMCO1-207ENST00000580248 KRTAP10-6P60371 365 aaPredicted RBP8.69□□□□□ -1.02
TMCO1-207ENST00000580248 KRTAP3-2Q9BYR7 98 aa8.66□□□□□ -1.02
TMCO1-207ENST00000580248 CSAG1Q6PB30 78 aa8.65□□□□□ -1.03
TMCO1-207ENST00000580248 MUC2Q02817 5179 aa8.59□□□□□ -1.03
TMCO1-207ENST00000580248 K7ERS5 55 aa8.58□□□□□ -1.04
TMCO1-207ENST00000580248 RNF213Q63HN8 5207 aa8.58□□□□□ -1.04
TMCO1-207ENST00000580248 ADM2Q7Z4H4 148 aa8.54□□□□□ -1.04
TMCO1-207ENST00000580248 P0C880 135 aa8.52□□□□□ -1.05
TMCO1-207ENST00000580248 KRTAP13-4Q3LI77 160 aa8.48□□□□□ -1.05
TMCO1-207ENST00000580248 KRTAP19-2Q3LHN2 52 aa8.44□□□□□ -1.06
TMCO1-207ENST00000580248 M0QZ58 72 aa8.42□□□□□ -1.06
TMCO1-207ENST00000580248 PRAC1Q96KF2 57 aa8.39□□□□□ -1.07
TMCO1-207ENST00000580248 A0A0D9SG42 100 aa8.37□□□□□ -1.07
TMCO1-207ENST00000580248 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
TMCO1-207ENST00000580248 ROMO1P60602 79 aa8.26□□□□□ -1.09
TMCO1-207ENST00000580248 FAT4Q6V0I7 4981 aa8.26□□□□□ -1.09
TMCO1-207ENST00000580248 KRTAP12-1P59990 96 aa8.22□□□□□ -1.09
TMCO1-207ENST00000580248 MT1HP80294 61 aa8.21□□□□□ -1.09
TMCO1-207ENST00000580248 R4GN34 69 aa8.21□□□□□ -1.09
TMCO1-207ENST00000580248 FLGP20930 4061 aaPredicted RBP8.21□□□□□ -1.1
TMCO1-207ENST00000580248 KRTAP12-2P59991 146 aa8.2□□□□□ -1.1
TMCO1-207ENST00000580248 SPINT4Q6UDR6 99 aa8.17□□□□□ -1.1
TMCO1-207ENST00000580248 KRTAP25-1Q3LHN0 102 aa8.15□□□□□ -1.1
TMCO1-207ENST00000580248 M0R2T5 61 aa8.12□□□□□ -1.11
TMCO1-207ENST00000580248 LINC01554Q52M75 96 aa8.12□□□□□ -1.11
TMCO1-207ENST00000580248 LCE2AQ5TA79 106 aaPredicted RBP8.09□□□□□ -1.11
TMCO1-207ENST00000580248 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
TMCO1-207ENST00000580248 CRIPTQ9P021 101 aa8.03□□□□□ -1.12
TMCO1-207ENST00000580248 KRTAP9-8Q9BYQ0 159 aa7.87□□□□□ -1.15
TMCO1-207ENST00000580248 MT2AP02795 61 aa7.82□□□□□ -1.16
TMCO1-207ENST00000580248 C10orf95Q9H7T3 257 aa7.78□□□□□ -1.16
TMCO1-207ENST00000580248 MT1FP04733 61 aa7.76□□□□□ -1.17
TMCO1-207ENST00000580248 KRTAP10-10P60014 251 aa7.75□□□□□ -1.17
TMCO1-207ENST00000580248 CAMK2N1Q7Z7J9 78 aa7.75□□□□□ -1.17
TMCO1-207ENST00000580248 SPRR2GQ9BYE4 73 aa7.69□□□□□ -1.18
TMCO1-207ENST00000580248 LOC100996750A0A140TA64 210 aa7.66□□□□□ -1.18
TMCO1-207ENST00000580248 KRTAP4-6Q9BYQ5 205 aa7.66□□□□□ -1.18
TMCO1-207ENST00000580248 KRTAP9-3Q9BYQ3 159 aa7.61□□□□□ -1.19
TMCO1-207ENST00000580248 KRTAP19-1Q8IUB9 90 aa7.59□□□□□ -1.19
TMCO1-207ENST00000580248 PLAC4Q8WY50 150 aa7.57□□□□□ -1.2
TMCO1-207ENST00000580248 PP632Q6XCG6 107 aa7.54□□□□□ -1.2
TMCO1-207ENST00000580248 TNP1P09430 55 aa7.47□□□□□ -1.21
TMCO1-207ENST00000580248 KRTAP23-1A1A580 65 aa7.44□□□□□ -1.22
TMCO1-207ENST00000580248 KRTAP19-8Q3LI54 63 aa7.44□□□□□ -1.22
TMCO1-207ENST00000580248 LCE2BO14633 110 aa7.43□□□□□ -1.22
TMCO1-207ENST00000580248 KRTAP15-1Q3LI76 137 aa7.32□□□□□ -1.24
TMCO1-207ENST00000580248 MT1BP07438 61 aa7.3□□□□□ -1.24
TMCO1-207ENST00000580248 KRTAP9-2Q9BYQ4 174 aa7.3□□□□□ -1.24
TMCO1-207ENST00000580248 USH2AO75445 5202 aa7.25□□□□□ -1.25
TMCO1-207ENST00000580248 FSIP2Q5CZC0 6907 aa7.14□□□□□ -1.27
TMCO1-207ENST00000580248 KRTAP10-5P60370 271 aa7.13□□□□□ -1.27
TMCO1-207ENST00000580248 MT1XP80297 61 aa7.12□□□□□ -1.27
TMCO1-207ENST00000580248 PRO2289Q9P1D8 64 aa7.06□□□□□ -1.28
TMCO1-207ENST00000580248 SSPOA2VEC9 5147 aa7.05□□□□□ -1.28
TMCO1-207ENST00000580248 KRTAP19-6Q3LI70 58 aa7.05□□□□□ -1.28
TMCO1-207ENST00000580248 LCE3AQ5TA76 89 aa7.01□□□□□ -1.29
TMCO1-207ENST00000580248 CRCT1Q9UGL9 99 aa7□□□□□ -1.29
TMCO1-207ENST00000580248 KRTAP8-1Q8IUC2 63 aa6.94□□□□□ -1.3
TMCO1-207ENST00000580248 NDUFAF8A1L188 74 aa6.93□□□□□ -1.3
TMCO1-207ENST00000580248 KRTAP10-12P60413 245 aa6.92□□□□□ -1.3
TMCO1-207ENST00000580248 KRTAP10-7P60409 375 aaPredicted RBP6.84□□□□□ -1.31
TMCO1-207ENST00000580248 LUZP6Q538Z0 58 aa6.83□□□□□ -1.32
TMCO1-207ENST00000580248 KRTAP9-6A0A140TA67 174 aa6.82□□□□□ -1.32
TMCO1-207ENST00000580248 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
TMCO1-207ENST00000580248 FCGBPQ9Y6R7 5405 aaPredicted RBP6.82□□□□□ -1.32
TMCO1-207ENST00000580248 H3BS24 57 aa6.81□□□□□ -1.32
TMCO1-207ENST00000580248 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
TMCO1-207ENST00000580248 KRTAP12-3P60328 96 aa6.76□□□□□ -1.33
TMCO1-207ENST00000580248 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.67□□□□□ -1.34
TMCO1-207ENST00000580248 KRTAP19-5Q3LI72 72 aa6.53□□□□□ -1.36
TMCO1-207ENST00000580248 MACF1Q9UPN3 7388 aaKnown RBP6.53□□□□□ -1.36
TMCO1-207ENST00000580248 KRTAP4-8A0A0G2JLE6 195 aa6.5□□□□□ -1.37
TMCO1-207ENST00000580248 KMT2DO14686 5537 aa6.46□□□□□ -1.38
TMCO1-207ENST00000580248 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
TMCO1-207ENST00000580248 LCE3BQ5TA77 95 aa6.36□□□□□ -1.39
TMCO1-207ENST00000580248 SYNE2Q8WXH0 6885 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms