RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 DOPEY1Q5JWR5 2465 aa0.94□□□□□ -2.26
PTP4A1-204ENST00000578299 CCDC168Q8NDH2 2452 aa0.94□□□□□ -2.26
PTP4A1-204ENST00000578299 TTC28Q96AY4 2481 aa0.94□□□□□ -2.26
PTP4A1-204ENST00000578299 CEP295Q9C0D2 2601 aa0.94□□□□□ -2.26
PTP4A1-204ENST00000578299 NBEAL2Q6ZNJ1 2754 aa0.94□□□□□ -2.26
PTP4A1-204ENST00000578299 TENM2Q9NT68 2774 aa0.94□□□□□ -2.26
PTP4A1-204ENST00000578299 PKHD1P08F94 4074 aa0.94□□□□□ -2.26
PTP4A1-204ENST00000578299 NF1P21359 2839 aa0.93□□□□□ -2.26
PTP4A1-204ENST00000578299 ZANQ9Y493 2812 aa0.93□□□□□ -2.26
PTP4A1-204ENST00000578299 FBN2P35556 2912 aa0.93□□□□□ -2.26
PTP4A1-204ENST00000578299 UNC79Q9P2D8 2635 aa0.93□□□□□ -2.26
PTP4A1-204ENST00000578299 USP9YO00507 2555 aaPredicted RBP0.93□□□□□ -2.26
PTP4A1-204ENST00000578299 EPG5Q9HCE0 2579 aa0.93□□□□□ -2.26
PTP4A1-204ENST00000578299 A0A1B0GU33 70 aa0.93□□□□□ -2.26
PTP4A1-204ENST00000578299 K7ERS5 55 aa0.93□□□□□ -2.26
PTP4A1-204ENST00000578299 DEFB123Q8N688 67 aa0.93□□□□□ -2.26
PTP4A1-204ENST00000578299 LRRK2Q5S007 2527 aa0.93□□□□□ -2.26
PTP4A1-204ENST00000578299 ZNF462Q96JM2 2506 aa0.93□□□□□ -2.26
PTP4A1-204ENST00000578299 UBR5O95071 2799 aaPredicted RBP0.92□□□□□ -2.26
PTP4A1-204ENST00000578299 KRTAP13-4Q3LI77 160 aa0.92□□□□□ -2.26
PTP4A1-204ENST00000578299 COX6B2Q6YFQ2 88 aa0.92□□□□□ -2.26
PTP4A1-204ENST00000578299 SPACA4Q8TDM5 124 aa0.92□□□□□ -2.26
PTP4A1-204ENST00000578299 TEX15Q9BXT5 2789 aa0.92□□□□□ -2.26
PTP4A1-204ENST00000578299 HIVEP1P15822 2718 aa0.92□□□□□ -2.26
PTP4A1-204ENST00000578299 POLQO75417 2590 aa0.92□□□□□ -2.26
PTP4A1-204ENST00000578299 CHD8Q9HCK8 2581 aa0.92□□□□□ -2.26
PTP4A1-204ENST00000578299 UTP20O75691 2785 aaKnown RBP0.91□□□□□ -2.26
PTP4A1-204ENST00000578299 DNHD1Q96M86 4753 aa0.91□□□□□ -2.26
PTP4A1-204ENST00000578299 HYDINQ4G0P3 5121 aa0.9□□□□□ -2.26
PTP4A1-204ENST00000578299 SETD2Q9BYW2 2564 aaPredicted RBP0.9□□□□□ -2.27
PTP4A1-204ENST00000578299 FBN1P35555 2871 aaKnown RBP0.9□□□□□ -2.27
PTP4A1-204ENST00000578299 A0A0D9SG42 100 aa0.9□□□□□ -2.27
PTP4A1-204ENST00000578299 RPL37P61927 97 aaKnown RBP0.9□□□□□ -2.27
PTP4A1-204ENST00000578299 PIEZO1Q92508 2521 aa0.9□□□□□ -2.27
PTP4A1-204ENST00000578299 MXRA5Q9NR99 2828 aa0.9□□□□□ -2.27
PTP4A1-204ENST00000578299 ACACBO00763 2458 aa0.9□□□□□ -2.27
PTP4A1-204ENST00000578299 ABCA12Q86UK0 2595 aa0.9□□□□□ -2.27
PTP4A1-204ENST00000578299 TENM3Q9P273 2699 aa0.9□□□□□ -2.27
PTP4A1-204ENST00000578299 LPAP08519 4548 aa0.9□□□□□ -2.27
PTP4A1-204ENST00000578299 ACANP16112 2415 aa0.89□□□□□ -2.27
PTP4A1-204ENST00000578299 BAHCC1Q9P281 2608 aa0.89□□□□□ -2.27
PTP4A1-204ENST00000578299 NIPBLQ6KC79 2804 aaeCLIP0.89□□□□□ -2.27
PTP4A1-204ENST00000578299 S4R3F8 94 aa0.89□□□□□ -2.27
PTP4A1-204ENST00000578299 ZNF292O60281 2723 aa0.89□□□□□ -2.27
PTP4A1-204ENST00000578299 ITPR3Q14573 2671 aa0.89□□□□□ -2.27
PTP4A1-204ENST00000578299 CFAP46Q8IYW2 2715 aa0.88□□□□□ -2.27
PTP4A1-204ENST00000578299 J3QKU1 62 aa0.88□□□□□ -2.27
PTP4A1-204ENST00000578299 KRTAP5-8O75690 187 aa0.88□□□□□ -2.27
PTP4A1-204ENST00000578299 Q6ZRN7 208 aaPredicted RBP0.88□□□□□ -2.27
PTP4A1-204ENST00000578299 UBE2DNLQ8IWF7 75 aa0.88□□□□□ -2.27
PTP4A1-204ENST00000578299 FAM208BQ5VWN6 2430 aa0.88□□□□□ -2.27
PTP4A1-204ENST00000578299 SRRM2Q9UQ35 2752 aaKnown RBP0.88□□□□□ -2.27
PTP4A1-204ENST00000578299 STAB2Q8WWQ8 2551 aa0.88□□□□□ -2.27
PTP4A1-204ENST00000578299 BDP1A6H8Y1 2624 aa0.87□□□□□ -2.27
PTP4A1-204ENST00000578299 FLNAP21333 2647 aaKnown RBP0.87□□□□□ -2.27
PTP4A1-204ENST00000578299 KMT2CQ8NEZ4 4911 aaKnown RBP0.87□□□□□ -2.27
PTP4A1-204ENST00000578299 MUC17Q685J3 4493 aa0.87□□□□□ -2.27
PTP4A1-204ENST00000578299 SMR3AQ99954 134 aa0.87□□□□□ -2.27
PTP4A1-204ENST00000578299 APLNQ9ULZ1 77 aa0.87□□□□□ -2.27
PTP4A1-204ENST00000578299 VWFP04275 2813 aa0.87□□□□□ -2.27
PTP4A1-204ENST00000578299 ZFHX2Q9C0A1 2572 aaPredicted RBP0.87□□□□□ -2.27
PTP4A1-204ENST00000578299 HECTD1Q9ULT8 2610 aa0.86□□□□□ -2.27
PTP4A1-204ENST00000578299 PKD1L1Q8TDX9 2849 aa0.86□□□□□ -2.27
PTP4A1-204ENST00000578299 CENPEQ02224 2701 aa0.86□□□□□ -2.27
PTP4A1-204ENST00000578299 KRTAP12-1P59990 96 aa0.86□□□□□ -2.27
PTP4A1-204ENST00000578299 CACNA1AO00555 2505 aa0.85□□□□□ -2.27
PTP4A1-204ENST00000578299 C9orf92A6NGG3 77 aa0.85□□□□□ -2.27
PTP4A1-204ENST00000578299 PLAC4Q8WY50 150 aa0.85□□□□□ -2.27
PTP4A1-204ENST00000578299 HELZ2Q9BYK8 2649 aaKnown RBP0.85□□□□□ -2.27
PTP4A1-204ENST00000578299 MEGF8Q7Z7M0 2845 aa0.85□□□□□ -2.27
PTP4A1-204ENST00000578299 TGP01266 2768 aa0.85□□□□□ -2.27
PTP4A1-204ENST00000578299 TENM4Q6N022 2769 aa0.85□□□□□ -2.27
PTP4A1-204ENST00000578299 FASNP49327 2511 aaKnown RBP0.84□□□□□ -2.27
PTP4A1-204ENST00000578299 COL7A1Q02388 2944 aa0.84□□□□□ -2.27
PTP4A1-204ENST00000578299 KRTAP21-2Q3LI59 83 aa0.84□□□□□ -2.27
PTP4A1-204ENST00000578299 RYR2Q92736 4967 aa0.84□□□□□ -2.28
PTP4A1-204ENST00000578299 FLGP20930 4061 aaPredicted RBP0.83□□□□□ -2.28
PTP4A1-204ENST00000578299 NOTCH1P46531 2555 aa0.83□□□□□ -2.28
PTP4A1-204ENST00000578299 DMBT1Q9UGM3 2413 aaPredicted RBP0.83□□□□□ -2.28
PTP4A1-204ENST00000578299 RYR1P21817 5038 aa0.82□□□□□ -2.28
PTP4A1-204ENST00000578299 FLNCQ14315 2725 aa0.82□□□□□ -2.28
PTP4A1-204ENST00000578299 MYO18BQ8IUG5 2567 aa0.82□□□□□ -2.28
PTP4A1-204ENST00000578299 PDZD2O15018 2839 aa0.82□□□□□ -2.28
PTP4A1-204ENST00000578299 MAST4O15021 2626 aa0.82□□□□□ -2.28
PTP4A1-204ENST00000578299 RPS29P62273 56 aaKnown RBP0.82□□□□□ -2.28
PTP4A1-204ENST00000578299 PRO2289Q9P1D8 64 aa0.82□□□□□ -2.28
PTP4A1-204ENST00000578299 LRP2P98164 4655 aa0.82□□□□□ -2.28
PTP4A1-204ENST00000578299 COL6A5A8TX70 2615 aa0.82□□□□□ -2.28
PTP4A1-204ENST00000578299 IGSF10Q6WRI0 2623 aa0.81□□□□□ -2.28
PTP4A1-204ENST00000578299 TEP1Q99973 2627 aaKnown RBP0.81□□□□□ -2.28
PTP4A1-204ENST00000578299 FLNBO75369 2602 aaKnown RBP0.81□□□□□ -2.28
PTP4A1-204ENST00000578299 ATRQ13535 2644 aa0.81□□□□□ -2.28
PTP4A1-204ENST00000578299 NBEAL1Q6ZS30 2694 aa0.81□□□□□ -2.28
PTP4A1-204ENST00000578299 TENM1Q9UKZ4 2725 aa0.8□□□□□ -2.28
PTP4A1-204ENST00000578299 FBN3Q75N90 2809 aa0.8□□□□□ -2.28
PTP4A1-204ENST00000578299 NSD1Q96L73 2696 aaPredicted RBP0.8□□□□□ -2.28
PTP4A1-204ENST00000578299 ITPR2Q14571 2701 aa0.8□□□□□ -2.28
PTP4A1-204ENST00000578299 HERC2O95714 4834 aa0.8□□□□□ -2.28
PTP4A1-204ENST00000578299 RYR3Q15413 4870 aa0.8□□□□□ -2.28
PTP4A1-204ENST00000578299 MGAM2Q2M2H8 2515 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms