RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 KRTAP10-10P60014 251 aa6.63□□□□□ -1.35
SNORD3B-1-201ENST00000577988 RPS28P62857 69 aaKnown RBP6.62□□□□□ -1.35
SNORD3B-1-201ENST00000577988 KLKP1Q107X0 134 aa6.62□□□□□ -1.35
SNORD3B-1-201ENST00000577988 S4R3F8 94 aa6.62□□□□□ -1.35
SNORD3B-1-201ENST00000577988 MT1FP04733 61 aa6.61□□□□□ -1.35
SNORD3B-1-201ENST00000577988 C20orf197Q8N268 126 aa6.61□□□□□ -1.35
SNORD3B-1-201ENST00000577988 CSAG1Q6PB30 78 aa6.59□□□□□ -1.35
SNORD3B-1-201ENST00000577988 A8MUN3 132 aa6.58□□□□□ -1.36
SNORD3B-1-201ENST00000577988 NDUFC1O43677 76 aa6.58□□□□□ -1.36
SNORD3B-1-201ENST00000577988 KRTAP9-6A0A140TA67 174 aa6.56□□□□□ -1.36
SNORD3B-1-201ENST00000577988 H7BZZ5 65 aa6.56□□□□□ -1.36
SNORD3B-1-201ENST00000577988 LCA10Q71F78 164 aa6.56□□□□□ -1.36
SNORD3B-1-201ENST00000577988 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
SNORD3B-1-201ENST00000577988 CRCT1Q9UGL9 99 aa6.53□□□□□ -1.36
SNORD3B-1-201ENST00000577988 SNURFQ9Y675 71 aa6.52□□□□□ -1.37
SNORD3B-1-201ENST00000577988 ATP5EP56381 51 aaPredicted RBP6.5□□□□□ -1.37
SNORD3B-1-201ENST00000577988 SERP1Q9Y6X1 66 aa6.47□□□□□ -1.37
SNORD3B-1-201ENST00000577988 FSIP2Q5CZC0 6907 aa6.43□□□□□ -1.38
SNORD3B-1-201ENST00000577988 DMAC1Q96GE9 116 aa6.42□□□□□ -1.38
SNORD3B-1-201ENST00000577988 H0YAA0 97 aa6.37□□□□□ -1.39
SNORD3B-1-201ENST00000577988 SMIM26A0A096LP01 95 aa6.35□□□□□ -1.39
SNORD3B-1-201ENST00000577988 ACYP2P14621 99 aa6.35□□□□□ -1.39
SNORD3B-1-201ENST00000577988 CRIPTQ9P021 101 aa6.33□□□□□ -1.4
SNORD3B-1-201ENST00000577988 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
SNORD3B-1-201ENST00000577988 SPANXA2-OT1Q8N9U9 137 aa6.3□□□□□ -1.4
SNORD3B-1-201ENST00000577988 SPRR2GQ9BYE4 73 aa6.3□□□□□ -1.4
SNORD3B-1-201ENST00000577988 SVIPQ8NHG7 77 aa6.28□□□□□ -1.4
SNORD3B-1-201ENST00000577988 USH2AO75445 5202 aa6.27□□□□□ -1.41
SNORD3B-1-201ENST00000577988 SPTSSBQ8NFR3 76 aa6.25□□□□□ -1.41
SNORD3B-1-201ENST00000577988 ADM2Q7Z4H4 148 aa6.24□□□□□ -1.41
SNORD3B-1-201ENST00000577988 KRTAP19-6Q3LI70 58 aa6.23□□□□□ -1.41
SNORD3B-1-201ENST00000577988 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
SNORD3B-1-201ENST00000577988 CHKB-CPT1BH3BT56 60 aa6.2□□□□□ -1.42
SNORD3B-1-201ENST00000577988 Q5VV11 94 aa6.19□□□□□ -1.42
SNORD3B-1-201ENST00000577988 SSPOA2VEC9 5147 aa6.16□□□□□ -1.42
SNORD3B-1-201ENST00000577988 MT1BP07438 61 aa6.15□□□□□ -1.42
SNORD3B-1-201ENST00000577988 Q1T7F1 81 aa6.15□□□□□ -1.42
SNORD3B-1-201ENST00000577988 P0C880 135 aa6.11□□□□□ -1.43
SNORD3B-1-201ENST00000577988 V9GYY9 64 aa6.11□□□□□ -1.43
SNORD3B-1-201ENST00000577988 R4GN34 69 aa6.1□□□□□ -1.43
SNORD3B-1-201ENST00000577988 COA5Q86WW8 74 aa6.07□□□□□ -1.44
SNORD3B-1-201ENST00000577988 FCGBPQ9Y6R7 5405 aaPredicted RBP6.06□□□□□ -1.44
SNORD3B-1-201ENST00000577988 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
SNORD3B-1-201ENST00000577988 M0QZ58 72 aa6.03□□□□□ -1.44
SNORD3B-1-201ENST00000577988 A6NN06 94 aa6.02□□□□□ -1.45
SNORD3B-1-201ENST00000577988 PRO0628Q9UI54 55 aa6.02□□□□□ -1.45
SNORD3B-1-201ENST00000577988 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
SNORD3B-1-201ENST00000577988 PLAC4Q8WY50 150 aa5.98□□□□□ -1.45
SNORD3B-1-201ENST00000577988 LINC01558Q9Y6Z2 57 aa5.96□□□□□ -1.46
SNORD3B-1-201ENST00000577988 PSPHP1O15172 72 aa5.95□□□□□ -1.46
SNORD3B-1-201ENST00000577988 BRK1Q8WUW1 75 aa5.94□□□□□ -1.46
SNORD3B-1-201ENST00000577988 KRTAP9-7A8MTY7 169 aa5.93□□□□□ -1.46
SNORD3B-1-201ENST00000577988 SEC61GP60059 68 aa5.93□□□□□ -1.46
SNORD3B-1-201ENST00000577988 PRR15LQ9BU68 103 aa5.92□□□□□ -1.46
SNORD3B-1-201ENST00000577988 LINC01554Q52M75 96 aa5.91□□□□□ -1.46
SNORD3B-1-201ENST00000577988 MACF1Q9UPN3 7388 aaKnown RBP5.9□□□□□ -1.46
SNORD3B-1-201ENST00000577988 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.46
SNORD3B-1-201ENST00000577988 MT1XP80297 61 aa5.81□□□□□ -1.48
SNORD3B-1-201ENST00000577988 KRTAP6-3Q3LI67 103 aa5.79□□□□□ -1.48
SNORD3B-1-201ENST00000577988 A6NED7 52 aa5.78□□□□□ -1.48
SNORD3B-1-201ENST00000577988 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
SNORD3B-1-201ENST00000577988 A0A1B0GU33 70 aa5.77□□□□□ -1.49
SNORD3B-1-201ENST00000577988 A0A1B0GU69 56 aa5.77□□□□□ -1.49
SNORD3B-1-201ENST00000577988 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
SNORD3B-1-201ENST00000577988 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
SNORD3B-1-201ENST00000577988 KRTAP4-6Q9BYQ5 205 aa5.74□□□□□ -1.49
SNORD3B-1-201ENST00000577988 SYNE2Q8WXH0 6885 aaKnown RBP5.74□□□□□ -1.49
SNORD3B-1-201ENST00000577988 A8MU10 97 aa5.71□□□□□ -1.5
SNORD3B-1-201ENST00000577988 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
SNORD3B-1-201ENST00000577988 SPATA8Q6RVD6 105 aa5.67□□□□□ -1.5
SNORD3B-1-201ENST00000577988 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
SNORD3B-1-201ENST00000577988 A0A0D9SG42 100 aa5.63□□□□□ -1.51
SNORD3B-1-201ENST00000577988 CAMK2N1Q7Z7J9 78 aa5.63□□□□□ -1.51
SNORD3B-1-201ENST00000577988 UQCR11O14957 56 aa5.62□□□□□ -1.51
SNORD3B-1-201ENST00000577988 KRTAP5-9P26371 169 aa5.6□□□□□ -1.51
SNORD3B-1-201ENST00000577988 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
SNORD3B-1-201ENST00000577988 SPINT4Q6UDR6 99 aa5.57□□□□□ -1.52
SNORD3B-1-201ENST00000577988 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
SNORD3B-1-201ENST00000577988 KRTAP10-12P60413 245 aa5.56□□□□□ -1.52
SNORD3B-1-201ENST00000577988 KRTAP10-7P60409 375 aaPredicted RBP5.53□□□□□ -1.52
SNORD3B-1-201ENST00000577988 KTN1-AS1Q86SY8 53 aa5.52□□□□□ -1.53
SNORD3B-1-201ENST00000577988 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
SNORD3B-1-201ENST00000577988 H3BS24 57 aa5.5□□□□□ -1.53
SNORD3B-1-201ENST00000577988 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
SNORD3B-1-201ENST00000577988 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
SNORD3B-1-201ENST00000577988 SPRR2FQ96RM1 72 aa5.45□□□□□ -1.54
SNORD3B-1-201ENST00000577988 NEBP20929 6669 aa5.42□□□□□ -1.54
SNORD3B-1-201ENST00000577988 KMT2DO14686 5537 aa5.4□□□□□ -1.55
SNORD3B-1-201ENST00000577988 MUC12Q9UKN1 5478 aa5.34□□□□□ -1.55
SNORD3B-1-201ENST00000577988 SPRR2EP22531 72 aa5.33□□□□□ -1.56
SNORD3B-1-201ENST00000577988 SPRR2BP35325 72 aa5.33□□□□□ -1.56
SNORD3B-1-201ENST00000577988 SPRR2AP35326 72 aa5.33□□□□□ -1.56
SNORD3B-1-201ENST00000577988 TNP1P09430 55 aa5.29□□□□□ -1.56
SNORD3B-1-201ENST00000577988 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
SNORD3B-1-201ENST00000577988 C10orf95Q9H7T3 257 aa5.29□□□□□ -1.56
SNORD3B-1-201ENST00000577988 K7ERS5 55 aa5.28□□□□□ -1.56
SNORD3B-1-201ENST00000577988 KRTAP4-12Q9BQ66 201 aa5.25□□□□□ -1.57
SNORD3B-1-201ENST00000577988 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
SNORD3B-1-201ENST00000577988 KRTAP20-1Q3LI63 56 aa5.22□□□□□ -1.57
SNORD3B-1-201ENST00000577988 MDN1Q9NU22 5596 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms