RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 ACACAQ13085 2346 aa0.07□□□□□ -2.4
TOP2A-203ENST00000577706 GPR98Q8WXG9 6306 aa0.07□□□□□ -2.4
TOP2A-203ENST00000577706 NBEAL2Q6ZNJ1 2754 aa0.07□□□□□ -2.4
TOP2A-203ENST00000577706 KALRNO60229 2985 aa0.07□□□□□ -2.4
TOP2A-203ENST00000577706 SPG11Q96JI7 2443 aa0.07□□□□□ -2.4
TOP2A-203ENST00000577706 LAMA5O15230 3695 aa0.07□□□□□ -2.4
TOP2A-203ENST00000577706 DNAH6Q9C0G6 4158 aa0.06□□□□□ -2.4
TOP2A-203ENST00000577706 FAT1Q14517 4588 aa0.06□□□□□ -2.4
TOP2A-203ENST00000577706 HIVEP1P15822 2718 aa0.05□□□□□ -2.4
TOP2A-203ENST00000577706 CRYBG3Q68DQ2 2970 aa0.05□□□□□ -2.4
TOP2A-203ENST00000577706 DYNC2H1Q8NCM8 4307 aaKnown RBP0.05□□□□□ -2.4
TOP2A-203ENST00000577706 DEFB1P60022 68 aa0.05□□□□□ -2.4
TOP2A-203ENST00000577706 LRRK2Q5S007 2527 aa0.05□□□□□ -2.4
TOP2A-203ENST00000577706 MYO18BQ8IUG5 2567 aa0.04□□□□□ -2.4
TOP2A-203ENST00000577706 HERC1Q15751 4861 aa0.04□□□□□ -2.4
TOP2A-203ENST00000577706 WDR87Q6ZQQ6 2873 aa0.04□□□□□ -2.4
TOP2A-203ENST00000577706 DNAH8Q96JB1 4490 aa0.04□□□□□ -2.4
TOP2A-203ENST00000577706 MAP1AP78559 2803 aaPredicted RBP0.04□□□□□ -2.4
TOP2A-203ENST00000577706 A0A096LNI7 61 aa0.03□□□□□ -2.4
TOP2A-203ENST00000577706 KRTAP19-7Q3SYF9 63 aa0.03□□□□□ -2.4
TOP2A-203ENST00000577706 LINC01590Q5TEZ4 76 aa0.03□□□□□ -2.4
TOP2A-203ENST00000577706 SPENQ96T58 3664 aaKnown RBP0.03□□□□□ -2.4
TOP2A-203ENST00000577706 SSPOA2VEC9 5147 aa0.03□□□□□ -2.41
TOP2A-203ENST00000577706 RIF1Q5UIP0 2472 aaKnown RBP0.03□□□□□ -2.41
TOP2A-203ENST00000577706 CCDC168Q8NDH2 2452 aa0.03□□□□□ -2.41
TOP2A-203ENST00000577706 PRCDQ00LT1 54 aa0.02□□□□□ -2.41
TOP2A-203ENST00000577706 USP9YO00507 2555 aaPredicted RBP0.02□□□□□ -2.41
TOP2A-203ENST00000577706 CELSR3Q9NYQ7 3312 aa0.02□□□□□ -2.41
TOP2A-203ENST00000577706 FSIP2Q5CZC0 6907 aa0.02□□□□□ -2.41
TOP2A-203ENST00000577706 DNAH1Q9P2D7 4330 aa0.02□□□□□ -2.41
TOP2A-203ENST00000577706 CHD7Q9P2D1 2997 aa0□□□□□ -2.41
TOP2A-203ENST00000577706 SYNE2Q8WXH0 6885 aaKnown RBP0□□□□□ -2.41
TOP2A-203ENST00000577706 DNAH7Q8WXX0 4024 aa0□□□□□ -2.41
TOP2A-203ENST00000577706 TGP01266 2768 aa-0.01□□□□□ -2.41
TOP2A-203ENST00000577706 MGAM2Q2M2H8 2515 aa-0.01□□□□□ -2.41
TOP2A-203ENST00000577706 MUC12Q9UKN1 5478 aa-0.01□□□□□ -2.41
TOP2A-203ENST00000577706 FLNAP21333 2647 aaKnown RBP-0.01□□□□□ -2.41
TOP2A-203ENST00000577706 AKAP9Q99996 3911 aa-0.02□□□□□ -2.41
TOP2A-203ENST00000577706 COL12A1Q99715 3063 aa-0.02□□□□□ -2.41
TOP2A-203ENST00000577706 MUC2Q02817 5179 aa-0.02□□□□□ -2.41
TOP2A-203ENST00000577706 KRTAP19-8Q3LI54 63 aa-0.02□□□□□ -2.41
TOP2A-203ENST00000577706 NBEAQ8NFP9 2946 aa-0.02□□□□□ -2.41
TOP2A-203ENST00000577706 HTTP42858 3142 aa-0.02□□□□□ -2.41
TOP2A-203ENST00000577706 PLECQ15149 4684 aaKnown RBP-0.02□□□□□ -2.41
TOP2A-203ENST00000577706 EPG5Q9HCE0 2579 aa-0.02□□□□□ -2.41
TOP2A-203ENST00000577706 NBPF19A0A087WUL8 3843 aa-0.03□□□□□ -2.41
TOP2A-203ENST00000577706 ITPR3Q14573 2671 aa-0.03□□□□□ -2.41
TOP2A-203ENST00000577706 PCLOQ9Y6V0 5065 aa-0.03□□□□□ -2.41
TOP2A-203ENST00000577706 MXRA5Q9NR99 2828 aa-0.04□□□□□ -2.42
TOP2A-203ENST00000577706 DNAH10Q8IVF4 4471 aa-0.04□□□□□ -2.42
TOP2A-203ENST00000577706 NBEAL1Q6ZS30 2694 aa-0.04□□□□□ -2.42
TOP2A-203ENST00000577706 TLN2Q9Y4G6 2542 aa-0.04□□□□□ -2.42
TOP2A-203ENST00000577706 MACF1Q9UPN3 7388 aaKnown RBP-0.04□□□□□ -2.42
TOP2A-203ENST00000577706 FAM186AA6NE01 2351 aa-0.05□□□□□ -2.42
TOP2A-203ENST00000577706 K7EIM0 57 aa-0.05□□□□□ -2.42
TOP2A-203ENST00000577706 SPTBN5Q9NRC6 3674 aaKnown RBP-0.06□□□□□ -2.42
TOP2A-203ENST00000577706 ZFHX4Q86UP3 3567 aa-0.06□□□□□ -2.42
TOP2A-203ENST00000577706 FRYQ5TBA9 3013 aa-0.06□□□□□ -2.42
TOP2A-203ENST00000577706 MT1HP80294 61 aa-0.07□□□□□ -2.42
TOP2A-203ENST00000577706 DEFB136Q30KP8 78 aa-0.07□□□□□ -2.42
TOP2A-203ENST00000577706 KRTAP6-1Q3LI64 71 aa-0.07□□□□□ -2.42
TOP2A-203ENST00000577706 USH2AO75445 5202 aa-0.08□□□□□ -2.42
TOP2A-203ENST00000577706 CSMD1Q96PZ7 3565 aa-0.08□□□□□ -2.42
TOP2A-203ENST00000577706 DYNC1H1Q14204 4646 aaKnown RBP-0.08□□□□□ -2.42
TOP2A-203ENST00000577706 STARD9Q9P2P6 4700 aa-0.08□□□□□ -2.42
TOP2A-203ENST00000577706 USP9XQ93008 2570 aaPredicted RBP-0.08□□□□□ -2.42
TOP2A-203ENST00000577706 MGAQ8IWI9 3026 aa-0.08□□□□□ -2.42
TOP2A-203ENST00000577706 HERC2O95714 4834 aa-0.09□□□□□ -2.42
TOP2A-203ENST00000577706 RHPN1-AS1Q9BWJ2 59 aa-0.09□□□□□ -2.42
TOP2A-203ENST00000577706 KMT2CQ8NEZ4 4911 aaKnown RBP-0.09□□□□□ -2.42
TOP2A-203ENST00000577706 CMYA5Q8N3K9 4069 aa-0.09□□□□□ -2.42
TOP2A-203ENST00000577706 DSTQ03001 7570 aaKnown RBP-0.09□□□□□ -2.42
TOP2A-203ENST00000577706 HYDINQ4G0P3 5121 aa-0.09□□□□□ -2.42
TOP2A-203ENST00000577706 MUC17Q685J3 4493 aa-0.1□□□□□ -2.42
TOP2A-203ENST00000577706 DEFB4AO15263 64 aa-0.1□□□□□ -2.43
TOP2A-203ENST00000577706 RPL39P5Q59GN2 51 aa-0.1□□□□□ -2.43
TOP2A-203ENST00000577706 NEBP20929 6669 aa-0.1□□□□□ -2.43
TOP2A-203ENST00000577706 TMEM167AQ8TBQ9 72 aa-0.11□□□□□ -2.43
TOP2A-203ENST00000577706 C5orf42Q9H799 3197 aa-0.12□□□□□ -2.43
TOP2A-203ENST00000577706 STAB2Q8WWQ8 2551 aa-0.12□□□□□ -2.43
TOP2A-203ENST00000577706 ITPR1Q14643 2758 aa-0.12□□□□□ -2.43
TOP2A-203ENST00000577706 MT1EP04732 61 aa-0.12□□□□□ -2.43
TOP2A-203ENST00000577706 HTN1P15515 57 aa-0.12□□□□□ -2.43
TOP2A-203ENST00000577706 RELNP78509 3460 aa-0.12□□□□□ -2.43
TOP2A-203ENST00000577706 RYR3Q15413 4870 aa-0.12□□□□□ -2.43
TOP2A-203ENST00000577706 EPPK1P58107 5090 aaKnown RBP-0.13□□□□□ -2.43
TOP2A-203ENST00000577706 DEFB108AA8MXU0 73 aa-0.13□□□□□ -2.43
TOP2A-203ENST00000577706 KRTAP20-2Q3LI61 65 aa-0.13□□□□□ -2.43
TOP2A-203ENST00000577706 ADGRG4Q8IZF6 3080 aa-0.13□□□□□ -2.43
TOP2A-203ENST00000577706 DNAH17Q9UFH2 4485 aa-0.13□□□□□ -2.43
TOP2A-203ENST00000577706 RYR2Q92736 4967 aa-0.14□□□□□ -2.43
TOP2A-203ENST00000577706 UBR4Q5T4S7 5183 aa-0.14□□□□□ -2.43
TOP2A-203ENST00000577706 RYR1P21817 5038 aa-0.14□□□□□ -2.43
TOP2A-203ENST00000577706 BIRC6Q9NR09 4857 aa-0.14□□□□□ -2.43
TOP2A-203ENST00000577706 MT1GP13640 62 aa-0.15□□□□□ -2.43
TOP2A-203ENST00000577706 MT1XP80297 61 aa-0.15□□□□□ -2.43
TOP2A-203ENST00000577706 MT1LQ93083 61 aa-0.15□□□□□ -2.43
TOP2A-203ENST00000577706 LAMA3Q16787 3333 aa-0.15□□□□□ -2.43
TOP2A-203ENST00000577706 KIAA1109Q2LD37 5005 aa-0.15□□□□□ -2.43
TOP2A-203ENST00000577706 APELAP0DMC3 54 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms