RNA–Protein interactions for RNA: ENST00000571351.1

TNFRSF12A-203, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 2

Gene TNFRSF12A, Length 1,678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-203ENST00000571351 COA5Q86WW8 74 aa10.28□□□□□ -0.76
TNFRSF12A-203ENST00000571351 FLGP20930 4061 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF12A-203ENST00000571351 SMIM26A0A096LP01 95 aa10.26□□□□□ -0.77
TNFRSF12A-203ENST00000571351 H1FX-AS1Q4G0G2 97 aa10.2□□□□□ -0.78
TNFRSF12A-203ENST00000571351 CHKB-CPT1BH3BT56 60 aa10.16□□□□□ -0.78
TNFRSF12A-203ENST00000571351 S4R3F8 94 aa10.09□□□□□ -0.79
TNFRSF12A-203ENST00000571351 MT1HP80294 61 aa10.06□□□□□ -0.8
TNFRSF12A-203ENST00000571351 LCA10Q71F78 164 aa10.05□□□□□ -0.8
TNFRSF12A-203ENST00000571351 SPTSSBQ8NFR3 76 aa10.04□□□□□ -0.8
TNFRSF12A-203ENST00000571351 Q1T7F1 81 aa10.02□□□□□ -0.8
TNFRSF12A-203ENST00000571351 KRTAP3-3Q9BYR6 98 aa10.02□□□□□ -0.81
TNFRSF12A-203ENST00000571351 V9GYY9 64 aa10□□□□□ -0.81
TNFRSF12A-203ENST00000571351 LCE2AQ5TA79 106 aaPredicted RBP9.98□□□□□ -0.81
TNFRSF12A-203ENST00000571351 LINC01558Q9Y6Z2 57 aa9.9□□□□□ -0.83
TNFRSF12A-203ENST00000571351 PSPHP1O15172 72 aa9.88□□□□□ -0.83
TNFRSF12A-203ENST00000571351 CSAG1Q6PB30 78 aa9.88□□□□□ -0.83
TNFRSF12A-203ENST00000571351 PRR15LQ9BU68 103 aa9.86□□□□□ -0.83
TNFRSF12A-203ENST00000571351 M0R2T5 61 aa9.84□□□□□ -0.83
TNFRSF12A-203ENST00000571351 Q5VV11 94 aa9.76□□□□□ -0.85
TNFRSF12A-203ENST00000571351 A0A1B0GU69 56 aa9.74□□□□□ -0.85
TNFRSF12A-203ENST00000571351 KRTAP10-6P60371 365 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF12A-203ENST00000571351 LORP23490 312 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF12A-203ENST00000571351 H0YAA0 97 aa9.71□□□□□ -0.86
TNFRSF12A-203ENST00000571351 SEC61GP60059 68 aa9.71□□□□□ -0.86
TNFRSF12A-203ENST00000571351 KRTAP9-8Q9BYQ0 159 aa9.65□□□□□ -0.86
TNFRSF12A-203ENST00000571351 KRTAP3-2Q9BYR7 98 aa9.63□□□□□ -0.87
TNFRSF12A-203ENST00000571351 ADM2Q7Z4H4 148 aa9.59□□□□□ -0.87
TNFRSF12A-203ENST00000571351 A6NED7 52 aa9.58□□□□□ -0.88
TNFRSF12A-203ENST00000571351 MT2AP02795 61 aa9.58□□□□□ -0.88
TNFRSF12A-203ENST00000571351 BRK1Q8WUW1 75 aa9.55□□□□□ -0.88
TNFRSF12A-203ENST00000571351 P0C880 135 aa9.53□□□□□ -0.88
TNFRSF12A-203ENST00000571351 MT1FP04733 61 aa9.52□□□□□ -0.89
TNFRSF12A-203ENST00000571351 A0A1B0GU33 70 aa9.47□□□□□ -0.89
TNFRSF12A-203ENST00000571351 UQCR11O14957 56 aa9.45□□□□□ -0.9
TNFRSF12A-203ENST00000571351 KRTAP10-10P60014 251 aa9.42□□□□□ -0.9
TNFRSF12A-203ENST00000571351 CDC42SE1Q9NRR8 79 aa9.39□□□□□ -0.91
TNFRSF12A-203ENST00000571351 MIR22HGQ0VDD5 57 aa9.37□□□□□ -0.91
TNFRSF12A-203ENST00000571351 A8MU10 97 aa9.36□□□□□ -0.91
TNFRSF12A-203ENST00000571351 PRO0628Q9UI54 55 aa9.36□□□□□ -0.91
TNFRSF12A-203ENST00000571351 SPATA8Q6RVD6 105 aa9.34□□□□□ -0.91
TNFRSF12A-203ENST00000571351 M0QZ58 72 aa9.33□□□□□ -0.92
TNFRSF12A-203ENST00000571351 KRTAP9-3Q9BYQ3 159 aa9.32□□□□□ -0.92
TNFRSF12A-203ENST00000571351 CRIPTQ9P021 101 aa9.32□□□□□ -0.92
TNFRSF12A-203ENST00000571351 KRTAP13-4Q3LI77 160 aa9.29□□□□□ -0.92
TNFRSF12A-203ENST00000571351 R4GN34 69 aa9.28□□□□□ -0.92
TNFRSF12A-203ENST00000571351 KRTAP19-1Q8IUB9 90 aa9.22□□□□□ -0.93
TNFRSF12A-203ENST00000571351 KRTAP9-2Q9BYQ4 174 aa9.2□□□□□ -0.94
TNFRSF12A-203ENST00000571351 SPRR2GQ9BYE4 73 aa9.17□□□□□ -0.94
TNFRSF12A-203ENST00000571351 LCE2DQ5TA82 110 aaPredicted RBP9.16□□□□□ -0.94
TNFRSF12A-203ENST00000571351 LCE2BO14633 110 aa9.14□□□□□ -0.95
TNFRSF12A-203ENST00000571351 USH2AO75445 5202 aa9.11□□□□□ -0.95
TNFRSF12A-203ENST00000571351 A0A0D9SG42 100 aa9.07□□□□□ -0.96
TNFRSF12A-203ENST00000571351 LINC01554Q52M75 96 aa9.04□□□□□ -0.96
TNFRSF12A-203ENST00000571351 PMAIP1Q13794 54 aa9.04□□□□□ -0.96
TNFRSF12A-203ENST00000571351 A6NN06 94 aa9□□□□□ -0.97
TNFRSF12A-203ENST00000571351 KRTAP19-8Q3LI54 63 aa9□□□□□ -0.97
TNFRSF12A-203ENST00000571351 FSIP2Q5CZC0 6907 aa9□□□□□ -0.97
TNFRSF12A-203ENST00000571351 KRTAP12-1P59990 96 aa8.96□□□□□ -0.98
TNFRSF12A-203ENST00000571351 K7ERS5 55 aa8.94□□□□□ -0.98
TNFRSF12A-203ENST00000571351 MT1BP07438 61 aa8.93□□□□□ -0.98
TNFRSF12A-203ENST00000571351 SSPOA2VEC9 5147 aa8.91□□□□□ -0.98
TNFRSF12A-203ENST00000571351 KRTAP12-2P59991 146 aa8.91□□□□□ -0.98
TNFRSF12A-203ENST00000571351 SPINT4Q6UDR6 99 aa8.88□□□□□ -0.99
TNFRSF12A-203ENST00000571351 KRTAP9-6A0A140TA67 174 aa8.8□□□□□ -1
TNFRSF12A-203ENST00000571351 PLAC4Q8WY50 150 aa8.77□□□□□ -1.01
TNFRSF12A-203ENST00000571351 CRCT1Q9UGL9 99 aa8.71□□□□□ -1.02
TNFRSF12A-203ENST00000571351 CAMK2N1Q7Z7J9 78 aa8.66□□□□□ -1.02
TNFRSF12A-203ENST00000571351 KTN1-AS1Q86SY8 53 aa8.65□□□□□ -1.03
TNFRSF12A-203ENST00000571351 KRTAP19-6Q3LI70 58 aa8.64□□□□□ -1.03
TNFRSF12A-203ENST00000571351 ROMO1P60602 79 aa8.56□□□□□ -1.04
TNFRSF12A-203ENST00000571351 FCGBPQ9Y6R7 5405 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF12A-203ENST00000571351 MT1XP80297 61 aa8.55□□□□□ -1.04
TNFRSF12A-203ENST00000571351 KRTAP10-5P60370 271 aa8.53□□□□□ -1.04
TNFRSF12A-203ENST00000571351 C10orf95Q9H7T3 257 aa8.48□□□□□ -1.05
TNFRSF12A-203ENST00000571351 PRAC1Q96KF2 57 aa8.45□□□□□ -1.06
TNFRSF12A-203ENST00000571351 PRO2289Q9P1D8 64 aa8.41□□□□□ -1.06
TNFRSF12A-203ENST00000571351 KRTAP25-1Q3LHN0 102 aa8.27□□□□□ -1.08
TNFRSF12A-203ENST00000571351 TNP1P09430 55 aa8.25□□□□□ -1.09
TNFRSF12A-203ENST00000571351 MACF1Q9UPN3 7388 aaKnown RBP8.22□□□□□ -1.09
TNFRSF12A-203ENST00000571351 KRTAP10-7P60409 375 aaPredicted RBP8.19□□□□□ -1.1
TNFRSF12A-203ENST00000571351 KMT2DO14686 5537 aa8.16□□□□□ -1.1
TNFRSF12A-203ENST00000571351 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.12□□□□□ -1.11
TNFRSF12A-203ENST00000571351 KRTAP10-12P60413 245 aa8.1□□□□□ -1.11
TNFRSF12A-203ENST00000571351 KRTAP23-1A1A580 65 aa8.04□□□□□ -1.12
TNFRSF12A-203ENST00000571351 SYNE2Q8WXH0 6885 aaKnown RBP8.01□□□□□ -1.13
TNFRSF12A-203ENST00000571351 KRTAP4-8A0A0G2JLE6 195 aa7.98□□□□□ -1.13
TNFRSF12A-203ENST00000571351 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
TNFRSF12A-203ENST00000571351 PP632Q6XCG6 107 aa7.98□□□□□ -1.13
TNFRSF12A-203ENST00000571351 KRTAP9-7A8MTY7 169 aa7.94□□□□□ -1.14
TNFRSF12A-203ENST00000571351 LCE3AQ5TA76 89 aa7.9□□□□□ -1.14
TNFRSF12A-203ENST00000571351 H3BS24 57 aa7.89□□□□□ -1.15
TNFRSF12A-203ENST00000571351 KRTAP8-1Q8IUC2 63 aa7.79□□□□□ -1.16
TNFRSF12A-203ENST00000571351 KRTAP6-3Q3LI67 103 aa7.7□□□□□ -1.18
TNFRSF12A-203ENST00000571351 KRTAP5-9P26371 169 aa7.69□□□□□ -1.18
TNFRSF12A-203ENST00000571351 MUC12Q9UKN1 5478 aa7.67□□□□□ -1.18
TNFRSF12A-203ENST00000571351 KRTAP19-7Q3SYF9 63 aa7.64□□□□□ -1.19
TNFRSF12A-203ENST00000571351 KRTAP19-5Q3LI72 72 aa7.62□□□□□ -1.19
TNFRSF12A-203ENST00000571351 KRTAP12-3P60328 96 aa7.61□□□□□ -1.19
TNFRSF12A-203ENST00000571351 SPRR2FQ96RM1 72 aa7.61□□□□□ -1.19
TNFRSF12A-203ENST00000571351 MDN1Q9NU22 5596 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 310.2 ms