RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SPRR1AP35321 89 aa3.77□□□□□ -1.81
SMG1-217ENST00000569764 HRES1P13985 223 aa3.77□□□□□ -1.81
SMG1-217ENST00000569764 LPAP08519 4548 aa3.75□□□□□ -1.81
SMG1-217ENST00000569764 LCE2BO14633 110 aa3.74□□□□□ -1.81
SMG1-217ENST00000569764 SPRR1BP22528 89 aa3.74□□□□□ -1.81
SMG1-217ENST00000569764 C9orf92A6NGG3 77 aa3.74□□□□□ -1.81
SMG1-217ENST00000569764 KRTAP10-8P60410 259 aa3.73□□□□□ -1.81
SMG1-217ENST00000569764 DYNC1H1Q14204 4646 aaKnown RBP3.72□□□□□ -1.81
SMG1-217ENST00000569764 HSPG2P98160 4391 aa3.72□□□□□ -1.81
SMG1-217ENST00000569764 FAT1Q14517 4588 aa3.71□□□□□ -1.82
SMG1-217ENST00000569764 DSCR10P59022 87 aa3.71□□□□□ -1.82
SMG1-217ENST00000569764 PRO2289Q9P1D8 64 aa3.71□□□□□ -1.82
SMG1-217ENST00000569764 TP53AIP1Q9HCN2 124 aa3.7□□□□□ -1.82
SMG1-217ENST00000569764 IGFL1Q6UW32 110 aa3.7□□□□□ -1.82
SMG1-217ENST00000569764 IGLV5-48A0A075B6I7 105 aa3.7□□□□□ -1.82
SMG1-217ENST00000569764 KRTAP3-1Q9BYR8 98 aa3.7□□□□□ -1.82
SMG1-217ENST00000569764 ANAPC11Q9NYG5 84 aa3.7□□□□□ -1.82
SMG1-217ENST00000569764 APOBP04114 4563 aaKnown RBP3.69□□□□□ -1.82
SMG1-217ENST00000569764 EPPK1P58107 5090 aaKnown RBP3.69□□□□□ -1.82
SMG1-217ENST00000569764 KRTAP13-1Q8IUC0 172 aa3.69□□□□□ -1.82
SMG1-217ENST00000569764 ABCA13Q86UQ4 5058 aa3.67□□□□□ -1.82
SMG1-217ENST00000569764 IGKV2-30P06310 120 aa3.66□□□□□ -1.82
SMG1-217ENST00000569764 IGKV2D-30A0A075B6S6 120 aa3.63□□□□□ -1.83
SMG1-217ENST00000569764 RPL37P61927 97 aaKnown RBP3.62□□□□□ -1.83
SMG1-217ENST00000569764 MRPL34Q9BQ48 92 aaKnown RBP3.61□□□□□ -1.83
SMG1-217ENST00000569764 LRP1Q07954 4544 aaKnown RBP3.61□□□□□ -1.83
SMG1-217ENST00000569764 RYR1P21817 5038 aa3.61□□□□□ -1.83
SMG1-217ENST00000569764 KRTAP1-4P0C5Y4 121 aa3.57□□□□□ -1.84
SMG1-217ENST00000569764 KRTAP13-2Q52LG2 175 aa3.56□□□□□ -1.84
SMG1-217ENST00000569764 KRTAP17-1Q9BYP8 105 aa3.56□□□□□ -1.84
SMG1-217ENST00000569764 KIAA1109Q2LD37 5005 aa3.55□□□□□ -1.84
SMG1-217ENST00000569764 XP32Q5T750 250 aa3.54□□□□□ -1.84
SMG1-217ENST00000569764 KRTAP4-5Q9BYR2 181 aa3.53□□□□□ -1.84
SMG1-217ENST00000569764 PCLOQ9Y6V0 5065 aa3.53□□□□□ -1.84
SMG1-217ENST00000569764 MT1HL1P0DM35 61 aa3.52□□□□□ -1.85
SMG1-217ENST00000569764 LORP23490 312 aaPredicted RBP3.52□□□□□ -1.85
SMG1-217ENST00000569764 KRTAP13-3Q3SY46 172 aa3.52□□□□□ -1.85
SMG1-217ENST00000569764 KRTAP10-4P60372 401 aaPredicted RBP3.51□□□□□ -1.85
SMG1-217ENST00000569764 PLAC4Q8WY50 150 aa3.5□□□□□ -1.85
SMG1-217ENST00000569764 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
SMG1-217ENST00000569764 MMP24-AS1A0A0U1RRL7 71 aa3.47□□□□□ -1.85
SMG1-217ENST00000569764 H1FX-AS1Q4G0G2 97 aa3.46□□□□□ -1.86
SMG1-217ENST00000569764 S4R3F8 94 aa3.44□□□□□ -1.86
SMG1-217ENST00000569764 BIRC6Q9NR09 4857 aa3.43□□□□□ -1.86
SMG1-217ENST00000569764 MUC2Q02817 5179 aa3.42□□□□□ -1.86
SMG1-217ENST00000569764 H0YAA0 97 aa3.41□□□□□ -1.86
SMG1-217ENST00000569764 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
SMG1-217ENST00000569764 FLGP20930 4061 aaPredicted RBP3.4□□□□□ -1.86
SMG1-217ENST00000569764 INE1O15225 51 aa3.38□□□□□ -1.87
SMG1-217ENST00000569764 LRP2P98164 4655 aa3.35□□□□□ -1.87
SMG1-217ENST00000569764 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
SMG1-217ENST00000569764 A0A0D9SG42 100 aa3.31□□□□□ -1.88
SMG1-217ENST00000569764 HERC2O95714 4834 aa3.3□□□□□ -1.88
SMG1-217ENST00000569764 HERC1Q15751 4861 aa3.26□□□□□ -1.89
SMG1-217ENST00000569764 MUC17Q685J3 4493 aa3.25□□□□□ -1.89
SMG1-217ENST00000569764 M0QZ58 72 aa3.2□□□□□ -1.9
SMG1-217ENST00000569764 KRTAP9-6A0A140TA67 174 aa3.15□□□□□ -1.9
SMG1-217ENST00000569764 KRTAP12-2P59991 146 aa3.13□□□□□ -1.91
SMG1-217ENST00000569764 HMCN2Q8NDA2 5059 aa3.12□□□□□ -1.91
SMG1-217ENST00000569764 CRCT1Q9UGL9 99 aa3.11□□□□□ -1.91
SMG1-217ENST00000569764 KRTAP9-2Q9BYQ4 174 aa3.11□□□□□ -1.91
SMG1-217ENST00000569764 RNF213Q63HN8 5207 aa3.1□□□□□ -1.91
SMG1-217ENST00000569764 KRTAP4-1Q9BYQ7 146 aa3.08□□□□□ -1.92
SMG1-217ENST00000569764 KRTAP10-6P60371 365 aaPredicted RBP3.08□□□□□ -1.92
SMG1-217ENST00000569764 FAT4Q6V0I7 4981 aa3.07□□□□□ -1.92
SMG1-217ENST00000569764 UBR4Q5T4S7 5183 aa3.07□□□□□ -1.92
SMG1-217ENST00000569764 MT1HP80294 61 aa3.03□□□□□ -1.92
SMG1-217ENST00000569764 KRTAP19-2Q3LHN2 52 aa3□□□□□ -1.93
SMG1-217ENST00000569764 TNP1P09430 55 aa2.98□□□□□ -1.93
SMG1-217ENST00000569764 KRTAP13-4Q3LI77 160 aa2.97□□□□□ -1.93
SMG1-217ENST00000569764 KRTAP12-1P59990 96 aa2.93□□□□□ -1.94
SMG1-217ENST00000569764 LCE5AQ5TCM9 118 aa2.9□□□□□ -1.94
SMG1-217ENST00000569764 MT2AP02795 61 aa2.87□□□□□ -1.95
SMG1-217ENST00000569764 KRTAP9-7A8MTY7 169 aa2.85□□□□□ -1.95
SMG1-217ENST00000569764 KRTAP8-1Q8IUC2 63 aa2.84□□□□□ -1.95
SMG1-217ENST00000569764 KRTAP19-4Q3LI73 84 aa2.81□□□□□ -1.96
SMG1-217ENST00000569764 KRTAP9-4Q9BYQ2 154 aa2.78□□□□□ -1.96
SMG1-217ENST00000569764 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
SMG1-217ENST00000569764 KRTAP2-2Q9BYT5 123 aa2.76□□□□□ -1.97
SMG1-217ENST00000569764 KRTAP19-1Q8IUB9 90 aa2.76□□□□□ -1.97
SMG1-217ENST00000569764 MT1FP04733 61 aa2.75□□□□□ -1.97
SMG1-217ENST00000569764 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
SMG1-217ENST00000569764 SPRR2GQ9BYE4 73 aa2.74□□□□□ -1.97
SMG1-217ENST00000569764 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
SMG1-217ENST00000569764 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
SMG1-217ENST00000569764 USH2AO75445 5202 aa2.72□□□□□ -1.97
SMG1-217ENST00000569764 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
SMG1-217ENST00000569764 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
SMG1-217ENST00000569764 SPRR2FQ96RM1 72 aa2.72□□□□□ -1.97
SMG1-217ENST00000569764 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
SMG1-217ENST00000569764 SPRR2EP22531 72 aa2.7□□□□□ -1.98
SMG1-217ENST00000569764 SPRR2BP35325 72 aa2.7□□□□□ -1.98
SMG1-217ENST00000569764 SPRR2AP35326 72 aa2.7□□□□□ -1.98
SMG1-217ENST00000569764 KRTAP9-8Q9BYQ0 159 aa2.7□□□□□ -1.98
SMG1-217ENST00000569764 KRTAP19-8Q3LI54 63 aa2.69□□□□□ -1.98
SMG1-217ENST00000569764 KRTAP10-5P60370 271 aa2.68□□□□□ -1.98
SMG1-217ENST00000569764 KRTAP9-3Q9BYQ3 159 aa2.67□□□□□ -1.98
SMG1-217ENST00000569764 KRTAP10-12P60413 245 aa2.66□□□□□ -1.98
SMG1-217ENST00000569764 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
SMG1-217ENST00000569764 SPRR2DP22532 72 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms