RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 MT1BP07438 61 aa6.31□□□□□ -1.4
GTF3C1-211ENST00000569653 C5orf47Q569G3 176 aa6.3□□□□□ -1.4
GTF3C1-211ENST00000569653 LCA10Q71F78 164 aa6.27□□□□□ -1.41
GTF3C1-211ENST00000569653 SCGB1A1P11684 91 aa6.26□□□□□ -1.41
GTF3C1-211ENST00000569653 CSAG1Q6PB30 78 aa6.26□□□□□ -1.41
GTF3C1-211ENST00000569653 LINC00208Q96KT6 92 aa6.26□□□□□ -1.41
GTF3C1-211ENST00000569653 FAM236AA0A1B0GUQ0 79 aa6.25□□□□□ -1.41
GTF3C1-211ENST00000569653 FAM236BA0A1B0GV22 79 aa6.25□□□□□ -1.41
GTF3C1-211ENST00000569653 KLKP1Q107X0 134 aa6.24□□□□□ -1.41
GTF3C1-211ENST00000569653 KRTAP19-8Q3LI54 63 aa6.23□□□□□ -1.41
GTF3C1-211ENST00000569653 MP68P56378 58 aa6.22□□□□□ -1.41
GTF3C1-211ENST00000569653 SPRR2GQ9BYE4 73 aa6.22□□□□□ -1.41
GTF3C1-211ENST00000569653 NEBP20929 6669 aa6.21□□□□□ -1.42
GTF3C1-211ENST00000569653 MUC12Q9UKN1 5478 aa6.18□□□□□ -1.42
GTF3C1-211ENST00000569653 TRAV7A0A075B6U4 112 aa6.18□□□□□ -1.42
GTF3C1-211ENST00000569653 A6NN06 94 aa6.18□□□□□ -1.42
GTF3C1-211ENST00000569653 H3BPC8 53 aa6.18□□□□□ -1.42
GTF3C1-211ENST00000569653 Q5VV11 94 aa6.17□□□□□ -1.42
GTF3C1-211ENST00000569653 KRTAP3-3Q9BYR6 98 aa6.17□□□□□ -1.42
GTF3C1-211ENST00000569653 A8MUN3 132 aa6.16□□□□□ -1.42
GTF3C1-211ENST00000569653 SMIM20Q8N5G0 67 aa6.15□□□□□ -1.42
GTF3C1-211ENST00000569653 KRTAP10-5P60370 271 aa6.14□□□□□ -1.43
GTF3C1-211ENST00000569653 NDUFC1O43677 76 aa6.11□□□□□ -1.43
GTF3C1-211ENST00000569653 SERP2Q8N6R1 65 aa6.07□□□□□ -1.44
GTF3C1-211ENST00000569653 KMT2DO14686 5537 aa6.05□□□□□ -1.44
GTF3C1-211ENST00000569653 SNURFQ9Y675 71 aa6.04□□□□□ -1.44
GTF3C1-211ENST00000569653 H0YAA0 97 aa6.03□□□□□ -1.44
GTF3C1-211ENST00000569653 KRTAP5-9P26371 169 aa6.03□□□□□ -1.44
GTF3C1-211ENST00000569653 DMAC1Q96GE9 116 aa6.03□□□□□ -1.44
GTF3C1-211ENST00000569653 CRIPTQ9P021 101 aa6.03□□□□□ -1.44
GTF3C1-211ENST00000569653 MDN1Q9NU22 5596 aa6.02□□□□□ -1.45
GTF3C1-211ENST00000569653 C20orf197Q8N268 126 aa6.01□□□□□ -1.45
GTF3C1-211ENST00000569653 COX7CP15954 63 aa5.96□□□□□ -1.46
GTF3C1-211ENST00000569653 ADM2Q7Z4H4 148 aa5.95□□□□□ -1.46
GTF3C1-211ENST00000569653 KRTAP20-1Q3LI63 56 aa5.94□□□□□ -1.46
GTF3C1-211ENST00000569653 CYSTM1Q9H1C7 97 aa5.92□□□□□ -1.46
GTF3C1-211ENST00000569653 SPANXA2-OT1Q8N9U9 137 aa5.9□□□□□ -1.46
GTF3C1-211ENST00000569653 ACYP2P14621 99 aa5.89□□□□□ -1.47
GTF3C1-211ENST00000569653 MT1XP80297 61 aa5.87□□□□□ -1.47
GTF3C1-211ENST00000569653 ANAPC13Q9BS18 74 aa5.86□□□□□ -1.47
GTF3C1-211ENST00000569653 H7BZZ5 65 aa5.84□□□□□ -1.47
GTF3C1-211ENST00000569653 SPTSSBQ8NFR3 76 aa5.82□□□□□ -1.48
GTF3C1-211ENST00000569653 R4GN34 69 aa5.82□□□□□ -1.48
GTF3C1-211ENST00000569653 CCDC179H3BU77 68 aa5.8□□□□□ -1.48
GTF3C1-211ENST00000569653 P0C880 135 aa5.8□□□□□ -1.48
GTF3C1-211ENST00000569653 KRTAP3-2Q9BYR7 98 aa5.8□□□□□ -1.48
GTF3C1-211ENST00000569653 CHKB-CPT1BH3BT56 60 aa5.79□□□□□ -1.48
GTF3C1-211ENST00000569653 SPRR2FQ96RM1 72 aa5.78□□□□□ -1.48
GTF3C1-211ENST00000569653 M0QZ58 72 aa5.76□□□□□ -1.49
GTF3C1-211ENST00000569653 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
GTF3C1-211ENST00000569653 SPRR2EP22531 72 aa5.73□□□□□ -1.49
GTF3C1-211ENST00000569653 SPRR2BP35325 72 aa5.73□□□□□ -1.49
GTF3C1-211ENST00000569653 SPRR2AP35326 72 aa5.73□□□□□ -1.49
GTF3C1-211ENST00000569653 COA5Q86WW8 74 aa5.73□□□□□ -1.49
GTF3C1-211ENST00000569653 PLAC4Q8WY50 150 aa5.73□□□□□ -1.49
GTF3C1-211ENST00000569653 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
GTF3C1-211ENST00000569653 PRO2289Q9P1D8 64 aa5.7□□□□□ -1.5
GTF3C1-211ENST00000569653 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
GTF3C1-211ENST00000569653 LCE1AQ5T7P2 110 aa5.69□□□□□ -1.5
GTF3C1-211ENST00000569653 KRTAP8-1Q8IUC2 63 aa5.69□□□□□ -1.5
GTF3C1-211ENST00000569653 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
GTF3C1-211ENST00000569653 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
GTF3C1-211ENST00000569653 LINC01554Q52M75 96 aa5.67□□□□□ -1.5
GTF3C1-211ENST00000569653 KRTAP10-7P60409 375 aaPredicted RBP5.59□□□□□ -1.51
GTF3C1-211ENST00000569653 ATP5EP56381 51 aaPredicted RBP5.55□□□□□ -1.52
GTF3C1-211ENST00000569653 KRTAP2-2Q9BYT5 123 aa5.55□□□□□ -1.52
GTF3C1-211ENST00000569653 KRTAP2-1Q9BYU5 128 aa5.55□□□□□ -1.52
GTF3C1-211ENST00000569653 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
GTF3C1-211ENST00000569653 SPRR2DP22532 72 aa5.53□□□□□ -1.52
GTF3C1-211ENST00000569653 TMEM258P61165 79 aa5.53□□□□□ -1.52
GTF3C1-211ENST00000569653 KRTAP13-4Q3LI77 160 aa5.53□□□□□ -1.52
GTF3C1-211ENST00000569653 SEC61GP60059 68 aa5.51□□□□□ -1.53
GTF3C1-211ENST00000569653 SERP1Q9Y6X1 66 aa5.48□□□□□ -1.53
GTF3C1-211ENST00000569653 A0A1B0GU33 70 aa5.4□□□□□ -1.54
GTF3C1-211ENST00000569653 A0A1B0GU69 56 aa5.4□□□□□ -1.54
GTF3C1-211ENST00000569653 LCE3BQ5TA77 95 aa5.4□□□□□ -1.54
GTF3C1-211ENST00000569653 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
GTF3C1-211ENST00000569653 PCP4P48539 62 aa5.37□□□□□ -1.55
GTF3C1-211ENST00000569653 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
GTF3C1-211ENST00000569653 LINC01558Q9Y6Z2 57 aa5.36□□□□□ -1.55
GTF3C1-211ENST00000569653 A0A0D9SG42 100 aa5.33□□□□□ -1.56
GTF3C1-211ENST00000569653 A8MU10 97 aa5.26□□□□□ -1.57
GTF3C1-211ENST00000569653 KRTAP12-1P59990 96 aa5.26□□□□□ -1.57
GTF3C1-211ENST00000569653 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
GTF3C1-211ENST00000569653 PRR15LQ9BU68 103 aa5.26□□□□□ -1.57
GTF3C1-211ENST00000569653 SPINT4Q6UDR6 99 aa5.25□□□□□ -1.57
GTF3C1-211ENST00000569653 SMIM26A0A096LP01 95 aa5.24□□□□□ -1.57
GTF3C1-211ENST00000569653 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
GTF3C1-211ENST00000569653 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.58
GTF3C1-211ENST00000569653 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
GTF3C1-211ENST00000569653 MT1EP04732 61 aa5.19□□□□□ -1.58
GTF3C1-211ENST00000569653 Q1T7F1 81 aa5.19□□□□□ -1.58
GTF3C1-211ENST00000569653 RPS28P62857 69 aaKnown RBP5.15□□□□□ -1.59
GTF3C1-211ENST00000569653 KRTAP19-3Q7Z4W3 81 aa5.15□□□□□ -1.59
GTF3C1-211ENST00000569653 UQCR11O14957 56 aa5.14□□□□□ -1.59
GTF3C1-211ENST00000569653 PSPHP1O15172 72 aa5.14□□□□□ -1.59
GTF3C1-211ENST00000569653 V9GYY9 64 aa5.14□□□□□ -1.59
GTF3C1-211ENST00000569653 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
GTF3C1-211ENST00000569653 KRTAP4-9Q9BYQ8 210 aa5.12□□□□□ -1.59
GTF3C1-211ENST00000569653 MIR22HGQ0VDD5 57 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms