RNA–Protein interactions for RNA: ENST00000568870.1

TCF25-223, Transcript of transcription factor 25, human

TSL 2

Gene TCF25, Length 263 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF25-223	ENST00000568870	SPANXA2-OT1	Q8N9U9	137 aa		6.62	□□□□□ -1.35
TCF25-223	ENST00000568870	KRTAP9-8	Q9BYQ0	159 aa		6.62	□□□□□ -1.35
TCF25-223	ENST00000568870	NDUFC1	O43677	76 aa		6.61	□□□□□ -1.35
TCF25-223	ENST00000568870	ACYP2	P14621	99 aa		6.61	□□□□□ -1.35
TCF25-223	ENST00000568870	KRTAP3-3	Q9BYR6	98 aa		6.61	□□□□□ -1.35
TCF25-223	ENST00000568870	CCDC179	H3BU77	68 aa		6.6	□□□□□ -1.35
TCF25-223	ENST00000568870	CYSTM1	Q9H1C7	97 aa		6.6	□□□□□ -1.35
TCF25-223	ENST00000568870	MT2A	P02795	61 aa		6.59	□□□□□ -1.35
TCF25-223	ENST00000568870		H7BZZ5	65 aa		6.57	□□□□□ -1.36
TCF25-223	ENST00000568870	MT1F	P04733	61 aa		6.55	□□□□□ -1.36
TCF25-223	ENST00000568870	KRTAP10-10	P60014	251 aa		6.55	□□□□□ -1.36
TCF25-223	ENST00000568870	CHKB-CPT1B	H3BT56	60 aa		6.53	□□□□□ -1.36
TCF25-223	ENST00000568870	LCE2D	Q5TA82	110 aa	Predicted RBP	6.47	□□□□□ -1.37
TCF25-223	ENST00000568870	SPTSSB	Q8NFR3	76 aa		6.47	□□□□□ -1.37
TCF25-223	ENST00000568870	COA5	Q86WW8	74 aa		6.45	□□□□□ -1.38
TCF25-223	ENST00000568870	CRCT1	Q9UGL9	99 aa		6.43	□□□□□ -1.38
TCF25-223	ENST00000568870		H0YAA0	97 aa		6.41	□□□□□ -1.38
TCF25-223	ENST00000568870	ADM2	Q7Z4H4	148 aa		6.41	□□□□□ -1.38
TCF25-223	ENST00000568870	KRTAP9-3	Q9BYQ3	159 aa		6.4	□□□□□ -1.38
TCF25-223	ENST00000568870	FSIP2	Q5CZC0	6907 aa		6.4	□□□□□ -1.39
TCF25-223	ENST00000568870	ATP5E	P56381	51 aa	Predicted RBP	6.38	□□□□□ -1.39
TCF25-223	ENST00000568870	TMEM258	P61165	79 aa		6.36	□□□□□ -1.39
TCF25-223	ENST00000568870	PCP4	P48539	62 aa		6.31	□□□□□ -1.4
TCF25-223	ENST00000568870	LCE2B	O14633	110 aa		6.3	□□□□□ -1.4
TCF25-223	ENST00000568870		P0C880	135 aa		6.29	□□□□□ -1.4
TCF25-223	ENST00000568870	CRIPT	Q9P021	101 aa		6.29	□□□□□ -1.4
TCF25-223	ENST00000568870	KRTAP19-1	Q8IUB9	90 aa		6.27	□□□□□ -1.41
TCF25-223	ENST00000568870	KRTAP3-2	Q9BYR7	98 aa		6.27	□□□□□ -1.41
TCF25-223	ENST00000568870	USH2A	O75445	5202 aa		6.24	□□□□□ -1.41
TCF25-223	ENST00000568870	SPRR2G	Q9BYE4	73 aa		6.23	□□□□□ -1.41
TCF25-223	ENST00000568870		R4GN34	69 aa		6.22	□□□□□ -1.41
TCF25-223	ENST00000568870	SEC61G	P60059	68 aa		6.21	□□□□□ -1.42
TCF25-223	ENST00000568870		M0QZ58	72 aa		6.19	□□□□□ -1.42
TCF25-223	ENST00000568870	SERP1	Q9Y6X1	66 aa		6.19	□□□□□ -1.42
TCF25-223	ENST00000568870		Q5VV11	94 aa		6.15	□□□□□ -1.42
TCF25-223	ENST00000568870	KRTAP19-8	Q3LI54	63 aa		6.13	□□□□□ -1.43
TCF25-223	ENST00000568870		A0A1B0GU69	56 aa		6.12	□□□□□ -1.43
TCF25-223	ENST00000568870	LINC01554	Q52M75	96 aa		6.11	□□□□□ -1.43
TCF25-223	ENST00000568870	SSPO	A2VEC9	5147 aa		6.1	□□□□□ -1.43
TCF25-223	ENST00000568870	MT1B	P07438	61 aa		6.09	□□□□□ -1.43
TCF25-223	ENST00000568870	KRTAP9-7	A8MTY7	169 aa		6.07	□□□□□ -1.44
TCF25-223	ENST00000568870	PRR15L	Q9BU68	103 aa		6.05	□□□□□ -1.44
TCF25-223	ENST00000568870	LINC01558	Q9Y6Z2	57 aa		6.05	□□□□□ -1.44
TCF25-223	ENST00000568870		A0A1B0GU33	70 aa		6.04	□□□□□ -1.44
TCF25-223	ENST00000568870	KRTAP13-4	Q3LI77	160 aa		6.03	□□□□□ -1.44
TCF25-223	ENST00000568870	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.02	□□□□□ -1.45
TCF25-223	ENST00000568870	PLAC4	Q8WY50	150 aa		6.01	□□□□□ -1.45
TCF25-223	ENST00000568870	KRTAP19-6	Q3LI70	58 aa		6	□□□□□ -1.45
TCF25-223	ENST00000568870	SPATA8	Q6RVD6	105 aa		5.99	□□□□□ -1.45
TCF25-223	ENST00000568870	SMIM26	A0A096LP01	95 aa		5.94	□□□□□ -1.46
TCF25-223	ENST00000568870		A0A0D9SG42	100 aa		5.94	□□□□□ -1.46
TCF25-223	ENST00000568870		V9GYY9	64 aa		5.94	□□□□□ -1.46
TCF25-223	ENST00000568870	RPS28	P62857	69 aa	Known RBP	5.93	□□□□□ -1.46
TCF25-223	ENST00000568870		A6NN06	94 aa		5.92	□□□□□ -1.46
TCF25-223	ENST00000568870		Q1T7F1	81 aa		5.91	□□□□□ -1.46
TCF25-223	ENST00000568870	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.91	□□□□□ -1.46
TCF25-223	ENST00000568870	PSPHP1	O15172	72 aa		5.88	□□□□□ -1.47
TCF25-223	ENST00000568870	KRTAP10-5	P60370	271 aa		5.88	□□□□□ -1.47
TCF25-223	ENST00000568870		A8MU10	97 aa		5.84	□□□□□ -1.47
TCF25-223	ENST00000568870	UQCR11	O14957	56 aa		5.84	□□□□□ -1.47
TCF25-223	ENST00000568870	PRO2289	Q9P1D8	64 aa		5.84	□□□□□ -1.47
TCF25-223	ENST00000568870	SPINT4	Q6UDR6	99 aa		5.83	□□□□□ -1.48
TCF25-223	ENST00000568870	MT1X	P80297	61 aa		5.81	□□□□□ -1.48
TCF25-223	ENST00000568870	CAMK2N1	Q7Z7J9	78 aa		5.8	□□□□□ -1.48
TCF25-223	ENST00000568870	KRTAP12-1	P59990	96 aa		5.78	□□□□□ -1.48
TCF25-223	ENST00000568870	MIR22HG	Q0VDD5	57 aa		5.76	□□□□□ -1.49
TCF25-223	ENST00000568870	KRTAP12-2	P59991	146 aa		5.75	□□□□□ -1.49
TCF25-223	ENST00000568870		A6NED7	52 aa		5.71	□□□□□ -1.5
TCF25-223	ENST00000568870	MACF1	Q9UPN3	7388 aa	Known RBP	5.68	□□□□□ -1.5
TCF25-223	ENST00000568870	SYNE2	Q8WXH0	6885 aa	Known RBP	5.61	□□□□□ -1.51
TCF25-223	ENST00000568870		K7ERS5	55 aa		5.59	□□□□□ -1.51
TCF25-223	ENST00000568870	KRTAP10-7	P60409	375 aa	Predicted RBP	5.57	□□□□□ -1.52
TCF25-223	ENST00000568870	KRTAP10-12	P60413	245 aa		5.51	□□□□□ -1.53
TCF25-223	ENST00000568870	CDC42SE1	Q9NRR8	79 aa		5.51	□□□□□ -1.53
TCF25-223	ENST00000568870	C10orf95	Q9H7T3	257 aa		5.49	□□□□□ -1.53
TCF25-223	ENST00000568870	KMT2D	O14686	5537 aa		5.48	□□□□□ -1.53
TCF25-223	ENST00000568870	KRTAP6-3	Q3LI67	103 aa		5.47	□□□□□ -1.53
TCF25-223	ENST00000568870	KRTAP4-8	A0A0G2JLE6	195 aa		5.45	□□□□□ -1.54
TCF25-223	ENST00000568870	KRTAP4-8	Q9BYQ9	185 aa		5.45	□□□□□ -1.54
TCF25-223	ENST00000568870	KRTAP8-1	Q8IUC2	63 aa		5.44	□□□□□ -1.54
TCF25-223	ENST00000568870	TNP1	P09430	55 aa		5.41	□□□□□ -1.54
TCF25-223	ENST00000568870	KRTAP5-9	P26371	169 aa		5.35	□□□□□ -1.55
TCF25-223	ENST00000568870	BRK1	Q8WUW1	75 aa		5.35	□□□□□ -1.55
TCF25-223	ENST00000568870	SPRR2F	Q96RM1	72 aa		5.34	□□□□□ -1.55
TCF25-223	ENST00000568870	NEB	P20929	6669 aa		5.29	□□□□□ -1.56
TCF25-223	ENST00000568870	KRTAP25-1	Q3LHN0	102 aa		5.29	□□□□□ -1.56
TCF25-223	ENST00000568870	ROMO1	P60602	79 aa		5.27	□□□□□ -1.57
TCF25-223	ENST00000568870	KRTAP20-1	Q3LI63	56 aa		5.27	□□□□□ -1.57
TCF25-223	ENST00000568870	LCE3A	Q5TA76	89 aa		5.26	□□□□□ -1.57
TCF25-223	ENST00000568870	MUC12	Q9UKN1	5478 aa		5.25	□□□□□ -1.57
TCF25-223	ENST00000568870	SPRR2E	P22531	72 aa		5.18	□□□□□ -1.58
TCF25-223	ENST00000568870	SPRR2B	P35325	72 aa		5.18	□□□□□ -1.58
TCF25-223	ENST00000568870	SPRR2A	P35326	72 aa		5.18	□□□□□ -1.58
TCF25-223	ENST00000568870	KRTAP19-5	Q3LI72	72 aa		5.18	□□□□□ -1.58
TCF25-223	ENST00000568870	KRTAP19-7	Q3SYF9	63 aa		5.18	□□□□□ -1.58
TCF25-223	ENST00000568870	MDN1	Q9NU22	5596 aa		5.17	□□□□□ -1.58
TCF25-223	ENST00000568870	MT1E	P04732	61 aa		5.13	□□□□□ -1.59
TCF25-223	ENST00000568870	LCE1A	Q5T7P2	110 aa		5.12	□□□□□ -1.59
TCF25-223	ENST00000568870	KRTAP23-1	A1A580	65 aa		5.07	□□□□□ -1.6
TCF25-223	ENST00000568870	KRTAP12-3	P60328	96 aa		5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms