RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 M0R2T5 61 aa5.04□□□□□ -1.6
HERPUD1-216ENST00000568814 KRTAP3-1Q9BYR8 98 aa5.04□□□□□ -1.6
HERPUD1-216ENST00000568814 FLGP20930 4061 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-216ENST00000568814 NDUFC1O43677 76 aa5□□□□□ -1.61
HERPUD1-216ENST00000568814 SPANXA2-OT1Q8N9U9 137 aa4.99□□□□□ -1.61
HERPUD1-216ENST00000568814 DMAC1Q96GE9 116 aa4.99□□□□□ -1.61
HERPUD1-216ENST00000568814 S4R3F8 94 aa4.99□□□□□ -1.61
HERPUD1-216ENST00000568814 CCDC179H3BU77 68 aa4.94□□□□□ -1.62
HERPUD1-216ENST00000568814 ACYP2P14621 99 aa4.94□□□□□ -1.62
HERPUD1-216ENST00000568814 KRTAP10-6P60371 365 aaPredicted RBP4.94□□□□□ -1.62
HERPUD1-216ENST00000568814 LCA10Q71F78 164 aa4.94□□□□□ -1.62
HERPUD1-216ENST00000568814 H7BZZ5 65 aa4.93□□□□□ -1.62
HERPUD1-216ENST00000568814 CSAG1Q6PB30 78 aa4.92□□□□□ -1.62
HERPUD1-216ENST00000568814 CYSTM1Q9H1C7 97 aa4.91□□□□□ -1.62
HERPUD1-216ENST00000568814 ATP5EP56381 51 aaPredicted RBP4.86□□□□□ -1.63
HERPUD1-216ENST00000568814 SSPOA2VEC9 5147 aa4.85□□□□□ -1.63
HERPUD1-216ENST00000568814 CHKB-CPT1BH3BT56 60 aa4.85□□□□□ -1.63
HERPUD1-216ENST00000568814 SPTSSBQ8NFR3 76 aa4.85□□□□□ -1.63
HERPUD1-216ENST00000568814 KRTAP9-8Q9BYQ0 159 aa4.84□□□□□ -1.63
HERPUD1-216ENST00000568814 USH2AO75445 5202 aa4.82□□□□□ -1.64
HERPUD1-216ENST00000568814 MT2AP02795 61 aa4.82□□□□□ -1.64
HERPUD1-216ENST00000568814 TMEM258P61165 79 aa4.82□□□□□ -1.64
HERPUD1-216ENST00000568814 COA5Q86WW8 74 aa4.81□□□□□ -1.64
HERPUD1-216ENST00000568814 H0YAA0 97 aa4.8□□□□□ -1.64
HERPUD1-216ENST00000568814 FCGBPQ9Y6R7 5405 aaPredicted RBP4.79□□□□□ -1.64
HERPUD1-216ENST00000568814 SYNE2Q8WXH0 6885 aaKnown RBP4.78□□□□□ -1.64
HERPUD1-216ENST00000568814 PCP4P48539 62 aa4.78□□□□□ -1.64
HERPUD1-216ENST00000568814 KRTAP10-10P60014 251 aa4.78□□□□□ -1.64
HERPUD1-216ENST00000568814 MT1FP04733 61 aa4.77□□□□□ -1.65
HERPUD1-216ENST00000568814 ADM2Q7Z4H4 148 aa4.72□□□□□ -1.65
HERPUD1-216ENST00000568814 MACF1Q9UPN3 7388 aaKnown RBP4.72□□□□□ -1.65
HERPUD1-216ENST00000568814 CRIPTQ9P021 101 aa4.7□□□□□ -1.66
HERPUD1-216ENST00000568814 KRTAP9-3Q9BYQ3 159 aa4.69□□□□□ -1.66
HERPUD1-216ENST00000568814 SERP1Q9Y6X1 66 aa4.66□□□□□ -1.66
HERPUD1-216ENST00000568814 SEC61GP60059 68 aa4.65□□□□□ -1.67
HERPUD1-216ENST00000568814 P0C880 135 aa4.63□□□□□ -1.67
HERPUD1-216ENST00000568814 KRTAP19-1Q8IUB9 90 aa4.62□□□□□ -1.67
HERPUD1-216ENST00000568814 SPRR2GQ9BYE4 73 aa4.61□□□□□ -1.67
HERPUD1-216ENST00000568814 R4GN34 69 aa4.6□□□□□ -1.67
HERPUD1-216ENST00000568814 H3BS24 57 aa4.59□□□□□ -1.67
HERPUD1-216ENST00000568814 A0A1B0GU69 56 aa4.57□□□□□ -1.68
HERPUD1-216ENST00000568814 M0QZ58 72 aa4.56□□□□□ -1.68
HERPUD1-216ENST00000568814 NEBP20929 6669 aa4.56□□□□□ -1.68
HERPUD1-216ENST00000568814 PRR15LQ9BU68 103 aa4.55□□□□□ -1.68
HERPUD1-216ENST00000568814 LINC01558Q9Y6Z2 57 aa4.55□□□□□ -1.68
HERPUD1-216ENST00000568814 RPS28P62857 69 aaKnown RBP4.53□□□□□ -1.68
HERPUD1-216ENST00000568814 KRTAP19-8Q3LI54 63 aa4.53□□□□□ -1.68
HERPUD1-216ENST00000568814 SVIPQ8NHG7 77 aa4.53□□□□□ -1.68
HERPUD1-216ENST00000568814 Q5VV11 94 aa4.52□□□□□ -1.69
HERPUD1-216ENST00000568814 V9GYY9 64 aa4.51□□□□□ -1.69
HERPUD1-216ENST00000568814 SMIM26A0A096LP01 95 aa4.5□□□□□ -1.69
HERPUD1-216ENST00000568814 A0A1B0GU33 70 aa4.5□□□□□ -1.69
HERPUD1-216ENST00000568814 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
HERPUD1-216ENST00000568814 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
HERPUD1-216ENST00000568814 MT1BP07438 61 aa4.47□□□□□ -1.69
HERPUD1-216ENST00000568814 Q1T7F1 81 aa4.47□□□□□ -1.69
HERPUD1-216ENST00000568814 LINC01554Q52M75 96 aa4.47□□□□□ -1.69
HERPUD1-216ENST00000568814 KRTAP13-4Q3LI77 160 aa4.44□□□□□ -1.7
HERPUD1-216ENST00000568814 A6NN06 94 aa4.43□□□□□ -1.7
HERPUD1-216ENST00000568814 PLAC4Q8WY50 150 aa4.43□□□□□ -1.7
HERPUD1-216ENST00000568814 MUC12Q9UKN1 5478 aa4.42□□□□□ -1.7
HERPUD1-216ENST00000568814 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
HERPUD1-216ENST00000568814 KRTAP19-6Q3LI70 58 aa4.4□□□□□ -1.71
HERPUD1-216ENST00000568814 UQCR11O14957 56 aa4.39□□□□□ -1.71
HERPUD1-216ENST00000568814 PSPHP1O15172 72 aa4.38□□□□□ -1.71
HERPUD1-216ENST00000568814 A0A0D9SG42 100 aa4.36□□□□□ -1.71
HERPUD1-216ENST00000568814 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
HERPUD1-216ENST00000568814 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
HERPUD1-216ENST00000568814 A8MU10 97 aa4.3□□□□□ -1.72
HERPUD1-216ENST00000568814 MIR22HGQ0VDD5 57 aa4.3□□□□□ -1.72
HERPUD1-216ENST00000568814 KRTAP12-1P59990 96 aa4.29□□□□□ -1.72
HERPUD1-216ENST00000568814 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
HERPUD1-216ENST00000568814 A6NED7 52 aa4.28□□□□□ -1.72
HERPUD1-216ENST00000568814 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
HERPUD1-216ENST00000568814 MT1XP80297 61 aa4.26□□□□□ -1.73
HERPUD1-216ENST00000568814 KRTAP12-2P59991 146 aa4.25□□□□□ -1.73
HERPUD1-216ENST00000568814 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
HERPUD1-216ENST00000568814 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
HERPUD1-216ENST00000568814 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
HERPUD1-216ENST00000568814 K7ERS5 55 aa4.21□□□□□ -1.74
HERPUD1-216ENST00000568814 KMT2DO14686 5537 aa4.21□□□□□ -1.74
HERPUD1-216ENST00000568814 GPR98Q8WXG9 6306 aa4.17□□□□□ -1.74
HERPUD1-216ENST00000568814 CDC42SE1Q9NRR8 79 aa4.17□□□□□ -1.74
HERPUD1-216ENST00000568814 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
HERPUD1-216ENST00000568814 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
HERPUD1-216ENST00000568814 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
HERPUD1-216ENST00000568814 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
HERPUD1-216ENST00000568814 KRTAP5-9P26371 169 aa4.05□□□□□ -1.76
HERPUD1-216ENST00000568814 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
HERPUD1-216ENST00000568814 TNP1P09430 55 aa4.03□□□□□ -1.76
HERPUD1-216ENST00000568814 BRK1Q8WUW1 75 aa4.03□□□□□ -1.76
HERPUD1-216ENST00000568814 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
HERPUD1-216ENST00000568814 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
HERPUD1-216ENST00000568814 KRTAP2-1Q9BYU5 128 aa4□□□□□ -1.77
HERPUD1-216ENST00000568814 KRTAP4-8Q9BYQ9 185 aa3.99□□□□□ -1.77
HERPUD1-216ENST00000568814 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
HERPUD1-216ENST00000568814 KRTAP25-1Q3LHN0 102 aa3.97□□□□□ -1.77
HERPUD1-216ENST00000568814 KRTAP4-8A0A0G2JLE6 195 aa3.95□□□□□ -1.78
HERPUD1-216ENST00000568814 ROMO1P60602 79 aa3.95□□□□□ -1.78
HERPUD1-216ENST00000568814 SPRR2EP22531 72 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms