RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 NISCHQ9Y2I1 1504 aa24.17■■□□□ 1.46
HERPUD1-216ENST00000568814 CCDC180Q9P1Z9 1646 aa21.38■■□□□ 1.01
HERPUD1-216ENST00000568814 ABCC9O60706 1549 aa20.53■□□□□ 0.88
HERPUD1-216ENST00000568814 ZCCHC6Q5VYS8 1495 aaKnown RBP20.22■□□□□ 0.83
HERPUD1-216ENST00000568814 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
HERPUD1-216ENST00000568814 MYO15BQ96JP2 1530 aa20.02■□□□□ 0.8
HERPUD1-216ENST00000568814 NACADO15069 1562 aa20.01■□□□□ 0.79
HERPUD1-216ENST00000568814 DCAF8L2P0C7V8 631 aa19.97■□□□□ 0.79
HERPUD1-216ENST00000568814 RB1CC1Q8TDY2 1594 aa19.95■□□□□ 0.78
HERPUD1-216ENST00000568814 DNAJC5BQ9UF47 199 aa19.9■□□□□ 0.78
HERPUD1-216ENST00000568814 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
HERPUD1-216ENST00000568814 UNC13AQ9UPW8 1703 aa19.44■□□□□ 0.7
HERPUD1-216ENST00000568814 BICRAQ9NZM4 1560 aa19.27■□□□□ 0.68
HERPUD1-216ENST00000568814 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
HERPUD1-216ENST00000568814 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
HERPUD1-216ENST00000568814 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
HERPUD1-216ENST00000568814 BAZ1AQ9NRL2 1556 aaPredicted RBP18.73■□□□□ 0.59
HERPUD1-216ENST00000568814 CECR2Q9BXF3 1484 aa18.73■□□□□ 0.59
HERPUD1-216ENST00000568814 DNAJC5Q9H3Z4 198 aa18.73■□□□□ 0.59
HERPUD1-216ENST00000568814 SMARCA4P51532 1647 aa18.68■□□□□ 0.58
HERPUD1-216ENST00000568814 MROH2BQ7Z745 1585 aa18.6■□□□□ 0.57
HERPUD1-216ENST00000568814 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.56
HERPUD1-216ENST00000568814 RSF1Q96T23 1441 aaPredicted RBP18.53■□□□□ 0.56
HERPUD1-216ENST00000568814 SMARCA2P51531 1590 aa18.52■□□□□ 0.56
HERPUD1-216ENST00000568814 PEG3Q9GZU2 1588 aa18.52■□□□□ 0.56
HERPUD1-216ENST00000568814 ATAD2BQ9ULI0 1458 aa18.48■□□□□ 0.55
HERPUD1-216ENST00000568814 NCAPD3P42695 1498 aa18.44■□□□□ 0.54
HERPUD1-216ENST00000568814 WIZO95785 1651 aa18.41■□□□□ 0.54
HERPUD1-216ENST00000568814 HMGXB3Q12766 1538 aa18.41■□□□□ 0.54
HERPUD1-216ENST00000568814 BAZ1BQ9UIG0 1483 aaKnown RBP18.37■□□□□ 0.53
HERPUD1-216ENST00000568814 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
HERPUD1-216ENST00000568814 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.52
HERPUD1-216ENST00000568814 CCDC88BA6NC98 1476 aa18.03■□□□□ 0.48
HERPUD1-216ENST00000568814 LAMC3Q9Y6N6 1575 aa17.91■□□□□ 0.46
HERPUD1-216ENST00000568814 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
HERPUD1-216ENST00000568814 CUX2O14529 1486 aa17.88■□□□□ 0.45
HERPUD1-216ENST00000568814 CFTRP13569 1480 aa17.88■□□□□ 0.45
HERPUD1-216ENST00000568814 NESP48681 1621 aa17.83■□□□□ 0.44
HERPUD1-216ENST00000568814 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
HERPUD1-216ENST00000568814 PDS5BQ9NTI5 1447 aa17.77■□□□□ 0.44
HERPUD1-216ENST00000568814 ERCC6Q03468 1493 aa17.74■□□□□ 0.43
HERPUD1-216ENST00000568814 TRIM41Q8WV44 630 aa17.73■□□□□ 0.43
HERPUD1-216ENST00000568814 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
HERPUD1-216ENST00000568814 CEP164Q9UPV0 1460 aa17.67■□□□□ 0.42
HERPUD1-216ENST00000568814 KIF21AQ7Z4S6 1674 aa17.66■□□□□ 0.42
HERPUD1-216ENST00000568814 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
HERPUD1-216ENST00000568814 THOC2Q8NI27 1593 aaKnown RBP17.53■□□□□ 0.4
HERPUD1-216ENST00000568814 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
HERPUD1-216ENST00000568814 WDR62O43379 1518 aa17.5■□□□□ 0.39
HERPUD1-216ENST00000568814 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
HERPUD1-216ENST00000568814 WRNQ14191 1432 aaPredicted RBP eCLIP17.48■□□□□ 0.39
HERPUD1-216ENST00000568814 URB2Q14146 1524 aaKnown RBP17.48■□□□□ 0.39
HERPUD1-216ENST00000568814 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
HERPUD1-216ENST00000568814 CUX1P39880 1505 aa17.44■□□□□ 0.38
HERPUD1-216ENST00000568814 TOP2BQ02880 1626 aa17.42■□□□□ 0.38
HERPUD1-216ENST00000568814 BIVM-ERCC5R4GMW8 1640 aa17.41■□□□□ 0.38
HERPUD1-216ENST00000568814 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
HERPUD1-216ENST00000568814 FGD5Q6ZNL6 1462 aa17.34■□□□□ 0.37
HERPUD1-216ENST00000568814 POLA1P09884 1462 aaPredicted RBP17.33■□□□□ 0.37
HERPUD1-216ENST00000568814 IFT140Q96RY7 1462 aa17.29■□□□□ 0.36
HERPUD1-216ENST00000568814 CHIC1Q5VXU3 224 aa17.27■□□□□ 0.36
HERPUD1-216ENST00000568814 SOGA1O94964 1423 aa17.25■□□□□ 0.35
HERPUD1-216ENST00000568814 TARBP1Q13395 1621 aaKnown RBP17.24■□□□□ 0.35
HERPUD1-216ENST00000568814 RAD54L2Q9Y4B4 1467 aa17.21■□□□□ 0.35
HERPUD1-216ENST00000568814 ABCA10Q8WWZ4 1543 aa17.21■□□□□ 0.34
HERPUD1-216ENST00000568814 WDR97A6NE52 1622 aa17.2■□□□□ 0.34
HERPUD1-216ENST00000568814 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
HERPUD1-216ENST00000568814 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
HERPUD1-216ENST00000568814 ABCA5Q8WWZ7 1642 aa17.1■□□□□ 0.33
HERPUD1-216ENST00000568814 KIF27Q86VH2 1401 aa17.1■□□□□ 0.33
HERPUD1-216ENST00000568814 TDRD9Q8NDG6 1382 aaKnown RBP17.09■□□□□ 0.33
HERPUD1-216ENST00000568814 GAPVD1Q14C86 1478 aa17.08■□□□□ 0.32
HERPUD1-216ENST00000568814 AQRO60306 1485 aaKnown RBP eCLIP17.06■□□□□ 0.326e-12■■■□□ 17.8
HERPUD1-216ENST00000568814 EEA1Q15075 1411 aa17.04■□□□□ 0.32
HERPUD1-216ENST00000568814 GRIN2BQ13224 1484 aa17.04■□□□□ 0.32
HERPUD1-216ENST00000568814 PBRM1Q86U86 1689 aa17.03■□□□□ 0.32
HERPUD1-216ENST00000568814 ERICH3Q5RHP9 1530 aa17.02■□□□□ 0.32
HERPUD1-216ENST00000568814 MAGI1Q96QZ7 1491 aaPredicted RBP16.98■□□□□ 0.31
HERPUD1-216ENST00000568814 RUSC2Q8N2Y8 1516 aa16.96■□□□□ 0.31
HERPUD1-216ENST00000568814 SNAPC4Q5SXM2 1469 aa16.95■□□□□ 0.3
HERPUD1-216ENST00000568814 CUL7Q14999 1698 aa16.94■□□□□ 0.3
HERPUD1-216ENST00000568814 IGF1RP08069 1367 aa16.94■□□□□ 0.3
HERPUD1-216ENST00000568814 RIMBP3CA6NJZ7 1639 aa16.94■□□□□ 0.3
HERPUD1-216ENST00000568814 RIMBP3BA6NNM3 1639 aa16.94■□□□□ 0.3
HERPUD1-216ENST00000568814 RIMBP3Q9UFD9 1639 aa16.94■□□□□ 0.3
HERPUD1-216ENST00000568814 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
HERPUD1-216ENST00000568814 FHAD1B1AJZ9 1412 aa16.91■□□□□ 0.3
HERPUD1-216ENST00000568814 OSCARQ8IYS5 282 aa16.9■□□□□ 0.3
HERPUD1-216ENST00000568814 SYNJ2O15056 1496 aa16.89■□□□□ 0.29
HERPUD1-216ENST00000568814 CSRNP3Q8WYN3 585 aa16.89■□□□□ 0.29
HERPUD1-216ENST00000568814 CARMIL1Q5VZK9 1371 aa16.87■□□□□ 0.29
HERPUD1-216ENST00000568814 FAM9AQ8IZU1 332 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-216ENST00000568814 PRXQ9BXM0 1461 aa16.84■□□□□ 0.29
HERPUD1-216ENST00000568814 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.28
HERPUD1-216ENST00000568814 GRIN2AQ12879 1464 aa16.82■□□□□ 0.28
HERPUD1-216ENST00000568814 CHMP7Q8WUX9 453 aaPredicted RBP16.82■□□□□ 0.28
HERPUD1-216ENST00000568814 CHD1O14646 1710 aa16.82■□□□□ 0.28
HERPUD1-216ENST00000568814 KIF21BO75037 1637 aa16.81■□□□□ 0.28
HERPUD1-216ENST00000568814 FBLN2P98095 1184 aa16.79■□□□□ 0.28
HERPUD1-216ENST00000568814 AEBP2Q6ZN18 517 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms