RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 ACYP2P14621 99 aa7.14□□□□□ -1.27
KLHDC4-223ENST00000568499 SPANXA2-OT1Q8N9U9 137 aa7.13□□□□□ -1.27
KLHDC4-223ENST00000568499 KRTAP9-8Q9BYQ0 159 aa7.1□□□□□ -1.27
KLHDC4-223ENST00000568499 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
KLHDC4-223ENST00000568499 KRTAP3-3Q9BYR6 98 aa7.06□□□□□ -1.28
KLHDC4-223ENST00000568499 MT2AP02795 61 aa7.05□□□□□ -1.28
KLHDC4-223ENST00000568499 CCDC179H3BU77 68 aa7.04□□□□□ -1.28
KLHDC4-223ENST00000568499 CHKB-CPT1BH3BT56 60 aa7.03□□□□□ -1.28
KLHDC4-223ENST00000568499 SPTSSBQ8NFR3 76 aa7.02□□□□□ -1.29
KLHDC4-223ENST00000568499 H7BZZ5 65 aa7.01□□□□□ -1.29
KLHDC4-223ENST00000568499 LCE2DQ5TA82 110 aaPredicted RBP7□□□□□ -1.29
KLHDC4-223ENST00000568499 MT1FP04733 61 aa6.99□□□□□ -1.29
KLHDC4-223ENST00000568499 CYSTM1Q9H1C7 97 aa6.96□□□□□ -1.3
KLHDC4-223ENST00000568499 TMEM258P61165 79 aa6.94□□□□□ -1.3
KLHDC4-223ENST00000568499 KRTAP9-2Q9BYQ4 174 aa6.94□□□□□ -1.3
KLHDC4-223ENST00000568499 H0YAA0 97 aa6.93□□□□□ -1.3
KLHDC4-223ENST00000568499 RPS28P62857 69 aaKnown RBP6.92□□□□□ -1.3
KLHDC4-223ENST00000568499 ATP5EP56381 51 aaPredicted RBP6.89□□□□□ -1.31
KLHDC4-223ENST00000568499 COA5Q86WW8 74 aa6.89□□□□□ -1.31
KLHDC4-223ENST00000568499 ADM2Q7Z4H4 148 aa6.87□□□□□ -1.31
KLHDC4-223ENST00000568499 KRTAP9-3Q9BYQ3 159 aa6.87□□□□□ -1.31
KLHDC4-223ENST00000568499 CRIPTQ9P021 101 aa6.84□□□□□ -1.31
KLHDC4-223ENST00000568499 LCE2BO14633 110 aa6.73□□□□□ -1.33
KLHDC4-223ENST00000568499 SEC61GP60059 68 aa6.73□□□□□ -1.33
KLHDC4-223ENST00000568499 SVIPQ8NHG7 77 aa6.73□□□□□ -1.33
KLHDC4-223ENST00000568499 SPRR2GQ9BYE4 73 aa6.72□□□□□ -1.33
KLHDC4-223ENST00000568499 P0C880 135 aa6.71□□□□□ -1.34
KLHDC4-223ENST00000568499 SERP1Q9Y6X1 66 aa6.71□□□□□ -1.34
KLHDC4-223ENST00000568499 KRTAP3-2Q9BYR7 98 aa6.7□□□□□ -1.34
KLHDC4-223ENST00000568499 R4GN34 69 aa6.7□□□□□ -1.34
KLHDC4-223ENST00000568499 KRTAP19-1Q8IUB9 90 aa6.69□□□□□ -1.34
KLHDC4-223ENST00000568499 KRTAP9-6A0A140TA67 174 aa6.68□□□□□ -1.34
KLHDC4-223ENST00000568499 CRCT1Q9UGL9 99 aa6.65□□□□□ -1.34
KLHDC4-223ENST00000568499 M0QZ58 72 aa6.64□□□□□ -1.35
KLHDC4-223ENST00000568499 Q5VV11 94 aa6.64□□□□□ -1.35
KLHDC4-223ENST00000568499 SMIM26A0A096LP01 95 aa6.6□□□□□ -1.35
KLHDC4-223ENST00000568499 KRTAP19-8Q3LI54 63 aa6.6□□□□□ -1.35
KLHDC4-223ENST00000568499 FSIP2Q5CZC0 6907 aa6.59□□□□□ -1.35
KLHDC4-223ENST00000568499 A0A1B0GU69 56 aa6.58□□□□□ -1.36
KLHDC4-223ENST00000568499 USH2AO75445 5202 aa6.56□□□□□ -1.36
KLHDC4-223ENST00000568499 PRR15LQ9BU68 103 aa6.55□□□□□ -1.36
KLHDC4-223ENST00000568499 LINC01554Q52M75 96 aa6.53□□□□□ -1.36
KLHDC4-223ENST00000568499 MT1BP07438 61 aa6.51□□□□□ -1.37
KLHDC4-223ENST00000568499 A0A1B0GU33 70 aa6.5□□□□□ -1.37
KLHDC4-223ENST00000568499 PLAC4Q8WY50 150 aa6.5□□□□□ -1.37
KLHDC4-223ENST00000568499 LINC01558Q9Y6Z2 57 aa6.49□□□□□ -1.37
KLHDC4-223ENST00000568499 KRTAP19-6Q3LI70 58 aa6.47□□□□□ -1.37
KLHDC4-223ENST00000568499 V9GYY9 64 aa6.44□□□□□ -1.38
KLHDC4-223ENST00000568499 SSPOA2VEC9 5147 aa6.43□□□□□ -1.38
KLHDC4-223ENST00000568499 KRTAP13-4Q3LI77 160 aa6.4□□□□□ -1.38
KLHDC4-223ENST00000568499 A6NN06 94 aa6.39□□□□□ -1.39
KLHDC4-223ENST00000568499 Q1T7F1 81 aa6.37□□□□□ -1.39
KLHDC4-223ENST00000568499 SPATA8Q6RVD6 105 aa6.37□□□□□ -1.39
KLHDC4-223ENST00000568499 PRO2289Q9P1D8 64 aa6.34□□□□□ -1.39
KLHDC4-223ENST00000568499 A0A0D9SG42 100 aa6.33□□□□□ -1.4
KLHDC4-223ENST00000568499 PRO0628Q9UI54 55 aa6.33□□□□□ -1.4
KLHDC4-223ENST00000568499 KRTAP10-5P60370 271 aa6.32□□□□□ -1.4
KLHDC4-223ENST00000568499 UQCR11O14957 56 aa6.3□□□□□ -1.4
KLHDC4-223ENST00000568499 PSPHP1O15172 72 aa6.26□□□□□ -1.41
KLHDC4-223ENST00000568499 FCGBPQ9Y6R7 5405 aaPredicted RBP6.25□□□□□ -1.41
KLHDC4-223ENST00000568499 SPINT4Q6UDR6 99 aa6.24□□□□□ -1.41
KLHDC4-223ENST00000568499 CAMK2N1Q7Z7J9 78 aa6.24□□□□□ -1.41
KLHDC4-223ENST00000568499 MT1XP80297 61 aa6.21□□□□□ -1.42
KLHDC4-223ENST00000568499 A8MU10 97 aa6.2□□□□□ -1.42
KLHDC4-223ENST00000568499 BRK1Q8WUW1 75 aa6.19□□□□□ -1.42
KLHDC4-223ENST00000568499 MIR22HGQ0VDD5 57 aa6.18□□□□□ -1.42
KLHDC4-223ENST00000568499 KRTAP12-1P59990 96 aa6.17□□□□□ -1.42
KLHDC4-223ENST00000568499 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.15□□□□□ -1.42
KLHDC4-223ENST00000568499 KRTAP12-2P59991 146 aa6.13□□□□□ -1.43
KLHDC4-223ENST00000568499 A6NED7 52 aa6.12□□□□□ -1.43
KLHDC4-223ENST00000568499 K7ERS5 55 aa6.08□□□□□ -1.44
KLHDC4-223ENST00000568499 MACF1Q9UPN3 7388 aaKnown RBP6.05□□□□□ -1.44
KLHDC4-223ENST00000568499 CDC42SE1Q9NRR8 79 aa6□□□□□ -1.45
KLHDC4-223ENST00000568499 KRTAP9-7A8MTY7 169 aa5.97□□□□□ -1.45
KLHDC4-223ENST00000568499 KRTAP10-7P60409 375 aaPredicted RBP5.93□□□□□ -1.46
KLHDC4-223ENST00000568499 KRTAP10-12P60413 245 aa5.92□□□□□ -1.46
KLHDC4-223ENST00000568499 PMAIP1Q13794 54 aa5.91□□□□□ -1.46
KLHDC4-223ENST00000568499 KRTAP6-3Q3LI67 103 aa5.91□□□□□ -1.46
KLHDC4-223ENST00000568499 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
KLHDC4-223ENST00000568499 TNP1P09430 55 aa5.86□□□□□ -1.47
KLHDC4-223ENST00000568499 KRTAP8-1Q8IUC2 63 aa5.86□□□□□ -1.47
KLHDC4-223ENST00000568499 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
KLHDC4-223ENST00000568499 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
KLHDC4-223ENST00000568499 KTN1-AS1Q86SY8 53 aa5.8□□□□□ -1.48
KLHDC4-223ENST00000568499 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
KLHDC4-223ENST00000568499 KRTAP5-9P26371 169 aa5.77□□□□□ -1.49
KLHDC4-223ENST00000568499 KMT2DO14686 5537 aa5.74□□□□□ -1.49
KLHDC4-223ENST00000568499 SPRR2FQ96RM1 72 aa5.73□□□□□ -1.49
KLHDC4-223ENST00000568499 KRTAP25-1Q3LHN0 102 aa5.72□□□□□ -1.49
KLHDC4-223ENST00000568499 ROMO1P60602 79 aa5.66□□□□□ -1.5
KLHDC4-223ENST00000568499 LCE3AQ5TA76 89 aa5.6□□□□□ -1.51
KLHDC4-223ENST00000568499 SPRR2EP22531 72 aa5.56□□□□□ -1.52
KLHDC4-223ENST00000568499 SPRR2BP35325 72 aa5.56□□□□□ -1.52
KLHDC4-223ENST00000568499 SPRR2AP35326 72 aa5.56□□□□□ -1.52
KLHDC4-223ENST00000568499 MUC12Q9UKN1 5478 aa5.54□□□□□ -1.52
KLHDC4-223ENST00000568499 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
KLHDC4-223ENST00000568499 KRTAP19-7Q3SYF9 63 aa5.53□□□□□ -1.52
KLHDC4-223ENST00000568499 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
KLHDC4-223ENST00000568499 LCE1AQ5T7P2 110 aa5.5□□□□□ -1.53
KLHDC4-223ENST00000568499 MT1EP04732 61 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms