RNA–Protein interactions for RNA: ENST00000568459.5

PKM-220, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 1,806 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-220ENST00000568459 HMCN2Q8NDA2 5059 aa7.99□□□□□ -1.13
PKM-220ENST00000568459 TNXBP22105 4242 aa7.98□□□□□ -1.13
PKM-220ENST00000568459 TYMSOSQ8TAI1 123 aa7.96□□□□□ -1.13
PKM-220ENST00000568459 PRAC1Q96KF2 57 aa7.92□□□□□ -1.14
PKM-220ENST00000568459 LINC01554Q52M75 96 aa7.89□□□□□ -1.15
PKM-220ENST00000568459 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
PKM-220ENST00000568459 LINC00304Q8N9R0 145 aa7.87□□□□□ -1.15
PKM-220ENST00000568459 UBR4Q5T4S7 5183 aa7.86□□□□□ -1.15
PKM-220ENST00000568459 C20orf166-AS1Q96NR2 134 aa7.85□□□□□ -1.15
PKM-220ENST00000568459 A8MUU9 505 aa7.85□□□□□ -1.15
PKM-220ENST00000568459 LRP2P98164 4655 aa7.8□□□□□ -1.16
PKM-220ENST00000568459 H0YAA0 97 aa7.75□□□□□ -1.17
PKM-220ENST00000568459 CSAG1Q6PB30 78 aa7.74□□□□□ -1.17
PKM-220ENST00000568459 A0A1B0GU33 70 aa7.73□□□□□ -1.17
PKM-220ENST00000568459 KRTAP3-1Q9BYR8 98 aa7.71□□□□□ -1.17
PKM-220ENST00000568459 H1FX-AS1Q4G0G2 97 aa7.71□□□□□ -1.18
PKM-220ENST00000568459 LPAP08519 4548 aa7.65□□□□□ -1.18
PKM-220ENST00000568459 COX6B2Q6YFQ2 88 aa7.65□□□□□ -1.18
PKM-220ENST00000568459 RNF213Q63HN8 5207 aa7.65□□□□□ -1.18
PKM-220ENST00000568459 C9orf92A6NGG3 77 aa7.62□□□□□ -1.19
PKM-220ENST00000568459 KRTAP25-1Q3LHN0 102 aa7.62□□□□□ -1.19
PKM-220ENST00000568459 K7ERS5 55 aa7.6□□□□□ -1.19
PKM-220ENST00000568459 TPRXLQ17RH7 258 aa7.5□□□□□ -1.21
PKM-220ENST00000568459 RPL37P61927 97 aaKnown RBP7.43□□□□□ -1.22
PKM-220ENST00000568459 KRTAP10-6P60371 365 aaPredicted RBP7.41□□□□□ -1.22
PKM-220ENST00000568459 ROMO1P60602 79 aa7.41□□□□□ -1.22
PKM-220ENST00000568459 KRTAP3-3Q9BYR6 98 aa7.41□□□□□ -1.22
PKM-220ENST00000568459 MUC2Q02817 5179 aa7.4□□□□□ -1.22
PKM-220ENST00000568459 KRTAP3-2Q9BYR7 98 aa7.34□□□□□ -1.23
PKM-220ENST00000568459 S4R3F8 94 aa7.32□□□□□ -1.24
PKM-220ENST00000568459 H3BS24 57 aa7.31□□□□□ -1.24
PKM-220ENST00000568459 SEC61BP60468 96 aaKnown RBP7.29□□□□□ -1.24
PKM-220ENST00000568459 MUC17Q685J3 4493 aa7.28□□□□□ -1.24
PKM-220ENST00000568459 KRTAP13-4Q3LI77 160 aa7.28□□□□□ -1.24
PKM-220ENST00000568459 XP32Q5T750 250 aa7.26□□□□□ -1.25
PKM-220ENST00000568459 FAT4Q6V0I7 4981 aa7.21□□□□□ -1.26
PKM-220ENST00000568459 LCE2AQ5TA79 106 aaPredicted RBP7.2□□□□□ -1.26
PKM-220ENST00000568459 KRTAP4-1Q9BYQ7 146 aa7.17□□□□□ -1.26
PKM-220ENST00000568459 CRIPTQ9P021 101 aa7.17□□□□□ -1.26
PKM-220ENST00000568459 A0A0D9SG42 100 aa7.17□□□□□ -1.26
PKM-220ENST00000568459 P0C880 135 aa7.15□□□□□ -1.26
PKM-220ENST00000568459 M0QZ58 72 aa7.12□□□□□ -1.27
PKM-220ENST00000568459 KRTAP12-1P59990 96 aa7.08□□□□□ -1.28
PKM-220ENST00000568459 KRTAP12-2P59991 146 aa7.08□□□□□ -1.28
PKM-220ENST00000568459 SPINT4Q6UDR6 99 aa7.04□□□□□ -1.28
PKM-220ENST00000568459 KRTAP9-2Q9BYQ4 174 aa7.03□□□□□ -1.28
PKM-220ENST00000568459 LCE2CQ5TA81 110 aa6.99□□□□□ -1.29
PKM-220ENST00000568459 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
PKM-220ENST00000568459 C10orf95Q9H7T3 257 aa6.97□□□□□ -1.29
PKM-220ENST00000568459 KRTAP19-2Q3LHN2 52 aa6.97□□□□□ -1.29
PKM-220ENST00000568459 MT1HP80294 61 aa6.91□□□□□ -1.3
PKM-220ENST00000568459 M0R2T5 61 aa6.85□□□□□ -1.31
PKM-220ENST00000568459 LCE2DQ5TA82 110 aaPredicted RBP6.83□□□□□ -1.32
PKM-220ENST00000568459 KRTAP9-6A0A140TA67 174 aa6.79□□□□□ -1.32
PKM-220ENST00000568459 R4GN34 69 aa6.78□□□□□ -1.32
PKM-220ENST00000568459 LORP23490 312 aaPredicted RBP6.77□□□□□ -1.33
PKM-220ENST00000568459 NDUFAF8A1L188 74 aa6.75□□□□□ -1.33
PKM-220ENST00000568459 FLGP20930 4061 aaPredicted RBP6.74□□□□□ -1.33
PKM-220ENST00000568459 A0A0A0MQY5 61 aa6.74□□□□□ -1.33
PKM-220ENST00000568459 CRCT1Q9UGL9 99 aa6.65□□□□□ -1.34
PKM-220ENST00000568459 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
PKM-220ENST00000568459 FSIP2Q5CZC0 6907 aa6.63□□□□□ -1.35
PKM-220ENST00000568459 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
PKM-220ENST00000568459 KRTAP9-8Q9BYQ0 159 aa6.54□□□□□ -1.36
PKM-220ENST00000568459 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.37
PKM-220ENST00000568459 MT2AP02795 61 aa6.45□□□□□ -1.38
PKM-220ENST00000568459 CAMK2N1Q7Z7J9 78 aa6.43□□□□□ -1.38
PKM-220ENST00000568459 KRTAP10-10P60014 251 aa6.41□□□□□ -1.38
PKM-220ENST00000568459 MT1FP04733 61 aa6.39□□□□□ -1.39
PKM-220ENST00000568459 LUZP6Q538Z0 58 aa6.36□□□□□ -1.39
PKM-220ENST00000568459 KRTAP9-3Q9BYQ3 159 aa6.34□□□□□ -1.4
PKM-220ENST00000568459 USH2AO75445 5202 aa6.32□□□□□ -1.4
PKM-220ENST00000568459 TNP1P09430 55 aa6.3□□□□□ -1.4
PKM-220ENST00000568459 LCE2BO14633 110 aa6.29□□□□□ -1.4
PKM-220ENST00000568459 SSPOA2VEC9 5147 aa6.26□□□□□ -1.41
PKM-220ENST00000568459 SPRR5A0A1B0GTR4 108 aa6.23□□□□□ -1.41
PKM-220ENST00000568459 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
PKM-220ENST00000568459 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.18□□□□□ -1.42
PKM-220ENST00000568459 FCGBPQ9Y6R7 5405 aaPredicted RBP6.14□□□□□ -1.43
PKM-220ENST00000568459 SPRR2GQ9BYE4 73 aa6.13□□□□□ -1.43
PKM-220ENST00000568459 KRTAP9-7A8MTY7 169 aa6.11□□□□□ -1.43
PKM-220ENST00000568459 KRTAP19-6Q3LI70 58 aa6.09□□□□□ -1.44
PKM-220ENST00000568459 MACF1Q9UPN3 7388 aaKnown RBP5.93□□□□□ -1.46
PKM-220ENST00000568459 KRTAP19-8Q3LI54 63 aa5.87□□□□□ -1.47
PKM-220ENST00000568459 MT1BP07438 61 aa5.86□□□□□ -1.47
PKM-220ENST00000568459 SYNE2Q8WXH0 6885 aaKnown RBP5.86□□□□□ -1.47
PKM-220ENST00000568459 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
PKM-220ENST00000568459 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
PKM-220ENST00000568459 KRTAP6-3Q3LI67 103 aa5.79□□□□□ -1.48
PKM-220ENST00000568459 KRTAP10-5P60370 271 aa5.75□□□□□ -1.49
PKM-220ENST00000568459 INE1O15225 51 aa5.67□□□□□ -1.5
PKM-220ENST00000568459 MT1XP80297 61 aa5.65□□□□□ -1.5
PKM-220ENST00000568459 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
PKM-220ENST00000568459 KRTAP12-3P60328 96 aa5.61□□□□□ -1.51
PKM-220ENST00000568459 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
PKM-220ENST00000568459 KRTAP5-9P26371 169 aa5.51□□□□□ -1.53
PKM-220ENST00000568459 NEBP20929 6669 aa5.49□□□□□ -1.53
PKM-220ENST00000568459 MUC12Q9UKN1 5478 aa5.49□□□□□ -1.53
PKM-220ENST00000568459 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
PKM-220ENST00000568459 KMT2DO14686 5537 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms