RNA–Protein interactions for RNA: ENST00000568176.5

EDC3-214, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 1,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-214ENST00000568176 LINC01558Q9Y6Z2 57 aa9.36□□□□□ -0.91
EDC3-214ENST00000568176 Q5VV11 94 aa9.34□□□□□ -0.91
EDC3-214ENST00000568176 COX6B2Q6YFQ2 88 aa9.34□□□□□ -0.91
EDC3-214ENST00000568176 CHKB-CPT1BH3BT56 60 aa9.33□□□□□ -0.92
EDC3-214ENST00000568176 PRR15LQ9BU68 103 aa9.32□□□□□ -0.92
EDC3-214ENST00000568176 RBM12B-AS1Q9P1G2 102 aa9.31□□□□□ -0.92
EDC3-214ENST00000568176 PRO0628Q9UI54 55 aa9.31□□□□□ -0.92
EDC3-214ENST00000568176 BRK1Q8WUW1 75 aa9.29□□□□□ -0.92
EDC3-214ENST00000568176 LCE2CQ5TA81 110 aa9.26□□□□□ -0.93
EDC3-214ENST00000568176 FAT4Q6V0I7 4981 aa9.2□□□□□ -0.94
EDC3-214ENST00000568176 H1FX-AS1Q4G0G2 97 aa9.19□□□□□ -0.94
EDC3-214ENST00000568176 FLGP20930 4061 aaPredicted RBP9.14□□□□□ -0.95
EDC3-214ENST00000568176 A6NED7 52 aa9.11□□□□□ -0.95
EDC3-214ENST00000568176 A0A1B0GU69 56 aa9.08□□□□□ -0.96
EDC3-214ENST00000568176 LCA10Q71F78 164 aa9.08□□□□□ -0.96
EDC3-214ENST00000568176 SPTSSBQ8NFR3 76 aa9.07□□□□□ -0.96
EDC3-214ENST00000568176 MT1HP80294 61 aa9.06□□□□□ -0.96
EDC3-214ENST00000568176 S4R3F8 94 aa9.06□□□□□ -0.96
EDC3-214ENST00000568176 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
EDC3-214ENST00000568176 CDC42SE1Q9NRR8 79 aa9.03□□□□□ -0.96
EDC3-214ENST00000568176 A8MU10 97 aa8.99□□□□□ -0.97
EDC3-214ENST00000568176 SEC61GP60059 68 aa8.91□□□□□ -0.98
EDC3-214ENST00000568176 LCE2AQ5TA79 106 aaPredicted RBP8.9□□□□□ -0.98
EDC3-214ENST00000568176 M0R2T5 61 aa8.88□□□□□ -0.99
EDC3-214ENST00000568176 UQCR11O14957 56 aa8.88□□□□□ -0.99
EDC3-214ENST00000568176 CSAG1Q6PB30 78 aa8.87□□□□□ -0.99
EDC3-214ENST00000568176 SPATA8Q6RVD6 105 aa8.86□□□□□ -0.99
EDC3-214ENST00000568176 MIR22HGQ0VDD5 57 aa8.81□□□□□ -1
EDC3-214ENST00000568176 PMAIP1Q13794 54 aa8.8□□□□□ -1
EDC3-214ENST00000568176 KRTAP10-6P60371 365 aaPredicted RBP8.75□□□□□ -1.01
EDC3-214ENST00000568176 LORP23490 312 aaPredicted RBP8.73□□□□□ -1.01
EDC3-214ENST00000568176 A6NN06 94 aa8.72□□□□□ -1.01
EDC3-214ENST00000568176 KRTAP9-8Q9BYQ0 159 aa8.7□□□□□ -1.02
EDC3-214ENST00000568176 A0A1B0GU33 70 aa8.69□□□□□ -1.02
EDC3-214ENST00000568176 KRTAP3-2Q9BYR7 98 aa8.66□□□□□ -1.02
EDC3-214ENST00000568176 MT2AP02795 61 aa8.65□□□□□ -1.02
EDC3-214ENST00000568176 ADM2Q7Z4H4 148 aa8.65□□□□□ -1.02
EDC3-214ENST00000568176 H0YAA0 97 aa8.64□□□□□ -1.03
EDC3-214ENST00000568176 P0C880 135 aa8.61□□□□□ -1.03
EDC3-214ENST00000568176 MT1FP04733 61 aa8.61□□□□□ -1.03
EDC3-214ENST00000568176 KTN1-AS1Q86SY8 53 aa8.57□□□□□ -1.04
EDC3-214ENST00000568176 KRTAP10-10P60014 251 aa8.52□□□□□ -1.04
EDC3-214ENST00000568176 KRTAP9-3Q9BYQ3 159 aa8.4□□□□□ -1.07
EDC3-214ENST00000568176 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
EDC3-214ENST00000568176 KRTAP19-1Q8IUB9 90 aa8.35□□□□□ -1.07
EDC3-214ENST00000568176 K7ERS5 55 aa8.33□□□□□ -1.08
EDC3-214ENST00000568176 M0QZ58 72 aa8.32□□□□□ -1.08
EDC3-214ENST00000568176 CRIPTQ9P021 101 aa8.32□□□□□ -1.08
EDC3-214ENST00000568176 R4GN34 69 aa8.32□□□□□ -1.08
EDC3-214ENST00000568176 SPRR2GQ9BYE4 73 aa8.3□□□□□ -1.08
EDC3-214ENST00000568176 A0A0D9SG42 100 aa8.23□□□□□ -1.09
EDC3-214ENST00000568176 LCE2BO14633 110 aa8.23□□□□□ -1.09
EDC3-214ENST00000568176 LINC01554Q52M75 96 aa8.19□□□□□ -1.1
EDC3-214ENST00000568176 PRAC1Q96KF2 57 aa8.19□□□□□ -1.1
EDC3-214ENST00000568176 LCE2DQ5TA82 110 aaPredicted RBP8.13□□□□□ -1.11
EDC3-214ENST00000568176 KRTAP19-8Q3LI54 63 aa8.13□□□□□ -1.11
EDC3-214ENST00000568176 MT1BP07438 61 aa8.09□□□□□ -1.11
EDC3-214ENST00000568176 KRTAP12-1P59990 96 aa8.09□□□□□ -1.11
EDC3-214ENST00000568176 KRTAP12-2P59991 146 aa8.08□□□□□ -1.12
EDC3-214ENST00000568176 ROMO1P60602 79 aa8.06□□□□□ -1.12
EDC3-214ENST00000568176 USH2AO75445 5202 aa8.05□□□□□ -1.12
EDC3-214ENST00000568176 SPINT4Q6UDR6 99 aa8.02□□□□□ -1.13
EDC3-214ENST00000568176 KRTAP9-2Q9BYQ4 174 aa7.99□□□□□ -1.13
EDC3-214ENST00000568176 KRTAP25-1Q3LHN0 102 aa7.94□□□□□ -1.14
EDC3-214ENST00000568176 PLAC4Q8WY50 150 aa7.91□□□□□ -1.14
EDC3-214ENST00000568176 FSIP2Q5CZC0 6907 aa7.87□□□□□ -1.15
EDC3-214ENST00000568176 SSPOA2VEC9 5147 aa7.85□□□□□ -1.15
EDC3-214ENST00000568176 MT1XP80297 61 aa7.76□□□□□ -1.17
EDC3-214ENST00000568176 CAMK2N1Q7Z7J9 78 aa7.75□□□□□ -1.17
EDC3-214ENST00000568176 KRTAP10-5P60370 271 aa7.74□□□□□ -1.17
EDC3-214ENST00000568176 KRTAP19-6Q3LI70 58 aa7.73□□□□□ -1.17
EDC3-214ENST00000568176 CRCT1Q9UGL9 99 aa7.65□□□□□ -1.18
EDC3-214ENST00000568176 C10orf95Q9H7T3 257 aa7.64□□□□□ -1.19
EDC3-214ENST00000568176 PRO2289Q9P1D8 64 aa7.58□□□□□ -1.2
EDC3-214ENST00000568176 FCGBPQ9Y6R7 5405 aaPredicted RBP7.54□□□□□ -1.2
EDC3-214ENST00000568176 KRTAP10-7P60409 375 aaPredicted RBP7.45□□□□□ -1.22
EDC3-214ENST00000568176 KRTAP9-6A0A140TA67 174 aa7.45□□□□□ -1.22
EDC3-214ENST00000568176 PP632Q6XCG6 107 aa7.35□□□□□ -1.23
EDC3-214ENST00000568176 KRTAP10-12P60413 245 aa7.34□□□□□ -1.24
EDC3-214ENST00000568176 TNP1P09430 55 aa7.33□□□□□ -1.24
EDC3-214ENST00000568176 KRTAP23-1A1A580 65 aa7.27□□□□□ -1.25
EDC3-214ENST00000568176 KMT2DO14686 5537 aa7.26□□□□□ -1.25
EDC3-214ENST00000568176 KRTAP4-8A0A0G2JLE6 195 aa7.25□□□□□ -1.25
EDC3-214ENST00000568176 KRTAP4-8Q9BYQ9 185 aa7.25□□□□□ -1.25
EDC3-214ENST00000568176 LCE3AQ5TA76 89 aa7.15□□□□□ -1.26
EDC3-214ENST00000568176 MACF1Q9UPN3 7388 aaKnown RBP7.15□□□□□ -1.26
EDC3-214ENST00000568176 KRTAP15-1Q3LI76 137 aa7.14□□□□□ -1.27
EDC3-214ENST00000568176 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.11□□□□□ -1.27
EDC3-214ENST00000568176 KRTAP8-1Q8IUC2 63 aa7.03□□□□□ -1.28
EDC3-214ENST00000568176 SYNE2Q8WXH0 6885 aaKnown RBP6.95□□□□□ -1.3
EDC3-214ENST00000568176 KRTAP19-5Q3LI72 72 aa6.94□□□□□ -1.3
EDC3-214ENST00000568176 KRTAP19-7Q3SYF9 63 aa6.93□□□□□ -1.3
EDC3-214ENST00000568176 KRTAP5-9P26371 169 aa6.85□□□□□ -1.31
EDC3-214ENST00000568176 SPRR2FQ96RM1 72 aa6.85□□□□□ -1.31
EDC3-214ENST00000568176 KRTAP12-3P60328 96 aa6.84□□□□□ -1.31
EDC3-214ENST00000568176 KRTAP6-3Q3LI67 103 aa6.83□□□□□ -1.32
EDC3-214ENST00000568176 MT1EP04732 61 aa6.8□□□□□ -1.32
EDC3-214ENST00000568176 KRTAP9-7A8MTY7 169 aa6.78□□□□□ -1.32
EDC3-214ENST00000568176 MUC12Q9UKN1 5478 aa6.78□□□□□ -1.32
EDC3-214ENST00000568176 NDUFAF8A1L188 74 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms