RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 Q1T7F1 81 aa7.66□□□□□ -1.18
COMMD4-221ENST00000567935 CHKB-CPT1BH3BT56 60 aa7.65□□□□□ -1.18
COMMD4-221ENST00000567935 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.63□□□□□ -1.19
COMMD4-221ENST00000567935 C4orf26Q17RF5 130 aa7.62□□□□□ -1.19
COMMD4-221ENST00000567935 MPLKIPQ8TAP9 179 aa7.61□□□□□ -1.19
COMMD4-221ENST00000567935 COX6B2Q6YFQ2 88 aa7.6□□□□□ -1.19
COMMD4-221ENST00000567935 SEC61BP60468 96 aaKnown RBP7.56□□□□□ -1.2
COMMD4-221ENST00000567935 SPTSSBQ8NFR3 76 aa7.55□□□□□ -1.2
COMMD4-221ENST00000567935 LINC01558Q9Y6Z2 57 aa7.54□□□□□ -1.2
COMMD4-221ENST00000567935 KRTAP3-1Q9BYR8 98 aa7.51□□□□□ -1.21
COMMD4-221ENST00000567935 KRTAP4-1Q9BYQ7 146 aa7.46□□□□□ -1.22
COMMD4-221ENST00000567935 PRR15LQ9BU68 103 aa7.45□□□□□ -1.22
COMMD4-221ENST00000567935 RBM12B-AS1Q9P1G2 102 aa7.44□□□□□ -1.22
COMMD4-221ENST00000567935 PSPHP1O15172 72 aa7.43□□□□□ -1.22
COMMD4-221ENST00000567935 LCE2CQ5TA81 110 aa7.4□□□□□ -1.22
COMMD4-221ENST00000567935 Q5VV11 94 aa7.4□□□□□ -1.22
COMMD4-221ENST00000567935 H1FX-AS1Q4G0G2 97 aa7.38□□□□□ -1.23
COMMD4-221ENST00000567935 A0A1B0GU69 56 aa7.37□□□□□ -1.23
COMMD4-221ENST00000567935 LORP23490 312 aaPredicted RBP7.36□□□□□ -1.23
COMMD4-221ENST00000567935 MT1HP80294 61 aa7.35□□□□□ -1.23
COMMD4-221ENST00000567935 SEC61GP60059 68 aa7.34□□□□□ -1.23
COMMD4-221ENST00000567935 S4R3F8 94 aa7.34□□□□□ -1.23
COMMD4-221ENST00000567935 SSPOA2VEC9 5147 aa7.34□□□□□ -1.23
COMMD4-221ENST00000567935 KRTAP10-6P60371 365 aaPredicted RBP7.31□□□□□ -1.24
COMMD4-221ENST00000567935 USH2AO75445 5202 aa7.3□□□□□ -1.24
COMMD4-221ENST00000567935 KRTAP19-2Q3LHN2 52 aa7.29□□□□□ -1.24
COMMD4-221ENST00000567935 LCA10Q71F78 164 aa7.28□□□□□ -1.24
COMMD4-221ENST00000567935 A6NED7 52 aa7.26□□□□□ -1.25
COMMD4-221ENST00000567935 FCGBPQ9Y6R7 5405 aaPredicted RBP7.26□□□□□ -1.25
COMMD4-221ENST00000567935 BRK1Q8WUW1 75 aa7.25□□□□□ -1.25
COMMD4-221ENST00000567935 KRTAP3-3Q9BYR6 98 aa7.25□□□□□ -1.25
COMMD4-221ENST00000567935 PRO0628Q9UI54 55 aa7.22□□□□□ -1.25
COMMD4-221ENST00000567935 UQCR11O14957 56 aa7.2□□□□□ -1.26
COMMD4-221ENST00000567935 SYNE2Q8WXH0 6885 aaKnown RBP7.19□□□□□ -1.26
COMMD4-221ENST00000567935 CSAG1Q6PB30 78 aa7.19□□□□□ -1.26
COMMD4-221ENST00000567935 CDC42SE1Q9NRR8 79 aa7.19□□□□□ -1.26
COMMD4-221ENST00000567935 MACF1Q9UPN3 7388 aaKnown RBP7.14□□□□□ -1.27
COMMD4-221ENST00000567935 FLGP20930 4061 aaPredicted RBP7.14□□□□□ -1.27
COMMD4-221ENST00000567935 A0A1B0GU33 70 aa7.11□□□□□ -1.27
COMMD4-221ENST00000567935 SPATA8Q6RVD6 105 aa7.11□□□□□ -1.27
COMMD4-221ENST00000567935 M0R2T5 61 aa7.1□□□□□ -1.27
COMMD4-221ENST00000567935 MIR22HGQ0VDD5 57 aa7.1□□□□□ -1.27
COMMD4-221ENST00000567935 H0YAA0 97 aa7.09□□□□□ -1.27
COMMD4-221ENST00000567935 KRTAP3-2Q9BYR7 98 aa7.03□□□□□ -1.28
COMMD4-221ENST00000567935 ADM2Q7Z4H4 148 aa7□□□□□ -1.29
COMMD4-221ENST00000567935 KRTAP19-1Q8IUB9 90 aa7□□□□□ -1.29
COMMD4-221ENST00000567935 A8MU10 97 aa6.99□□□□□ -1.29
COMMD4-221ENST00000567935 P0C880 135 aa6.94□□□□□ -1.3
COMMD4-221ENST00000567935 M0QZ58 72 aa6.91□□□□□ -1.3
COMMD4-221ENST00000567935 SVIPQ8NHG7 77 aa6.89□□□□□ -1.31
COMMD4-221ENST00000567935 PMAIP1Q13794 54 aa6.88□□□□□ -1.31
COMMD4-221ENST00000567935 NEBP20929 6669 aa6.87□□□□□ -1.31
COMMD4-221ENST00000567935 K7ERS5 55 aa6.84□□□□□ -1.31
COMMD4-221ENST00000567935 KRTAP6-3Q3LI67 103 aa6.84□□□□□ -1.31
COMMD4-221ENST00000567935 KRTAP9-8Q9BYQ0 159 aa6.83□□□□□ -1.32
COMMD4-221ENST00000567935 A6NN06 94 aa6.82□□□□□ -1.32
COMMD4-221ENST00000567935 KRTAP13-4Q3LI77 160 aa6.82□□□□□ -1.32
COMMD4-221ENST00000567935 LCE2BO14633 110 aa6.81□□□□□ -1.32
COMMD4-221ENST00000567935 R4GN34 69 aa6.77□□□□□ -1.33
COMMD4-221ENST00000567935 CRIPTQ9P021 101 aa6.76□□□□□ -1.33
COMMD4-221ENST00000567935 A0A0D9SG42 100 aa6.72□□□□□ -1.33
COMMD4-221ENST00000567935 KRTAP20-1Q3LI63 56 aa6.71□□□□□ -1.34
COMMD4-221ENST00000567935 MUC12Q9UKN1 5478 aa6.71□□□□□ -1.34
COMMD4-221ENST00000567935 KTN1-AS1Q86SY8 53 aa6.67□□□□□ -1.34
COMMD4-221ENST00000567935 KRTAP19-6Q3LI70 58 aa6.66□□□□□ -1.34
COMMD4-221ENST00000567935 MT2AP02795 61 aa6.65□□□□□ -1.34
COMMD4-221ENST00000567935 KRTAP9-3Q9BYQ3 159 aa6.64□□□□□ -1.35
COMMD4-221ENST00000567935 KRTAP12-1P59990 96 aa6.63□□□□□ -1.35
COMMD4-221ENST00000567935 MT1FP04733 61 aa6.61□□□□□ -1.35
COMMD4-221ENST00000567935 SPINT4Q6UDR6 99 aa6.59□□□□□ -1.35
COMMD4-221ENST00000567935 KRTAP12-2P59991 146 aa6.58□□□□□ -1.36
COMMD4-221ENST00000567935 LINC01554Q52M75 96 aa6.58□□□□□ -1.36
COMMD4-221ENST00000567935 ROMO1P60602 79 aa6.51□□□□□ -1.37
COMMD4-221ENST00000567935 SPRR2GQ9BYE4 73 aa6.51□□□□□ -1.37
COMMD4-221ENST00000567935 KRTAP10-10P60014 251 aa6.5□□□□□ -1.37
COMMD4-221ENST00000567935 MDN1Q9NU22 5596 aa6.39□□□□□ -1.39
COMMD4-221ENST00000567935 KMT2DO14686 5537 aa6.37□□□□□ -1.39
COMMD4-221ENST00000567935 CAMK2N1Q7Z7J9 78 aa6.37□□□□□ -1.39
COMMD4-221ENST00000567935 PRAC1Q96KF2 57 aa6.35□□□□□ -1.39
COMMD4-221ENST00000567935 PLAC4Q8WY50 150 aa6.34□□□□□ -1.39
COMMD4-221ENST00000567935 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
COMMD4-221ENST00000567935 KRTAP2-3P0C7H8 128 aa6.3□□□□□ -1.4
COMMD4-221ENST00000567935 KRTAP2-4Q9BYR9 128 aa6.3□□□□□ -1.4
COMMD4-221ENST00000567935 KRTAP25-1Q3LHN0 102 aa6.27□□□□□ -1.41
COMMD4-221ENST00000567935 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
COMMD4-221ENST00000567935 KRTAP5-9P26371 169 aa6.21□□□□□ -1.42
COMMD4-221ENST00000567935 MT1BP07438 61 aa6.16□□□□□ -1.42
COMMD4-221ENST00000567935 GPR98Q8WXG9 6306 aa6.14□□□□□ -1.43
COMMD4-221ENST00000567935 TNP1P09430 55 aa6.11□□□□□ -1.43
COMMD4-221ENST00000567935 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
COMMD4-221ENST00000567935 KRTAP2-2Q9BYT5 123 aa6.06□□□□□ -1.44
COMMD4-221ENST00000567935 KRTAP2-1Q9BYU5 128 aa6.06□□□□□ -1.44
COMMD4-221ENST00000567935 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
COMMD4-221ENST00000567935 PRO2289Q9P1D8 64 aa6.02□□□□□ -1.45
COMMD4-221ENST00000567935 MT1XP80297 61 aa5.99□□□□□ -1.45
COMMD4-221ENST00000567935 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
COMMD4-221ENST00000567935 SPRR2EP22531 72 aa5.95□□□□□ -1.46
COMMD4-221ENST00000567935 SPRR2BP35325 72 aa5.95□□□□□ -1.46
COMMD4-221ENST00000567935 SPRR2AP35326 72 aa5.95□□□□□ -1.46
COMMD4-221ENST00000567935 SPRR2FQ96RM1 72 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms