RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 KRTAP12-2P59991 146 aa3.1□□□□□ -1.91
CDH13-209ENST00000567109 INE1O15225 51 aa3.09□□□□□ -1.91
CDH13-209ENST00000567109 SVEP1Q4LDE5 3571 aa3.09□□□□□ -1.92
CDH13-209ENST00000567109 TRRAPQ9Y4A5 3859 aa3.08□□□□□ -1.92
CDH13-209ENST00000567109 KRTAP15-1Q3LI76 137 aa3.08□□□□□ -1.92
CDH13-209ENST00000567109 KRTAP13-4Q3LI77 160 aa3.06□□□□□ -1.92
CDH13-209ENST00000567109 CSMD3Q7Z407 3707 aa3.05□□□□□ -1.92
CDH13-209ENST00000567109 MYCBP2O75592 4640 aa3.04□□□□□ -1.92
CDH13-209ENST00000567109 CRCT1Q9UGL9 99 aa3.03□□□□□ -1.92
CDH13-209ENST00000567109 DNAH5Q8TE73 4624 aa3.03□□□□□ -1.92
CDH13-209ENST00000567109 KRTAP4-5Q9BYR2 181 aa3□□□□□ -1.93
CDH13-209ENST00000567109 KRTAP12-1P59990 96 aa2.99□□□□□ -1.93
CDH13-209ENST00000567109 HUWE1Q7Z6Z7 4374 aaKnown RBP2.99□□□□□ -1.93
CDH13-209ENST00000567109 ALMS1Q8TCU4 4167 aa2.97□□□□□ -1.93
CDH13-209ENST00000567109 HSPG2P98160 4391 aa2.96□□□□□ -1.94
CDH13-209ENST00000567109 HMCN2Q8NDA2 5059 aa2.96□□□□□ -1.94
CDH13-209ENST00000567109 FBN1P35555 2871 aaKnown RBP2.95□□□□□ -1.94
CDH13-209ENST00000567109 KRTAP10-6P60371 365 aaPredicted RBP2.94□□□□□ -1.94
CDH13-209ENST00000567109 FAT3Q8TDW7 4589 aa2.93□□□□□ -1.94
CDH13-209ENST00000567109 RNF213Q63HN8 5207 aa2.92□□□□□ -1.94
CDH13-209ENST00000567109 DNAH2Q9P225 4427 aa2.92□□□□□ -1.94
CDH13-209ENST00000567109 EPPK1P58107 5090 aaKnown RBP2.92□□□□□ -1.94
CDH13-209ENST00000567109 KRTAP3-1Q9BYR8 98 aa2.9□□□□□ -1.94
CDH13-209ENST00000567109 SACSQ9NZJ4 4579 aa2.9□□□□□ -1.94
CDH13-209ENST00000567109 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
CDH13-209ENST00000567109 ZNF469Q96JG9 3925 aaPredicted RBP2.89□□□□□ -1.95
CDH13-209ENST00000567109 CMYA5Q8N3K9 4069 aa2.88□□□□□ -1.95
CDH13-209ENST00000567109 LYSTQ99698 3801 aa2.88□□□□□ -1.95
CDH13-209ENST00000567109 DNAH9Q9NYC9 4486 aa2.84□□□□□ -1.95
CDH13-209ENST00000567109 DNAH17Q9UFH2 4485 aa2.83□□□□□ -1.96
CDH13-209ENST00000567109 KRTAP3-2Q9BYR7 98 aa2.83□□□□□ -1.96
CDH13-209ENST00000567109 DYNC2H1Q8NCM8 4307 aaKnown RBP2.81□□□□□ -1.96
CDH13-209ENST00000567109 UBR4Q5T4S7 5183 aa2.8□□□□□ -1.96
CDH13-209ENST00000567109 FRAS1Q86XX4 4008 aa2.8□□□□□ -1.96
CDH13-209ENST00000567109 DNAH6Q9C0G6 4158 aa2.8□□□□□ -1.96
CDH13-209ENST00000567109 KRTAP19-4Q3LI73 84 aa2.8□□□□□ -1.96
CDH13-209ENST00000567109 DNAH7Q8WXX0 4024 aa2.8□□□□□ -1.96
CDH13-209ENST00000567109 APOBP04114 4563 aaKnown RBP2.79□□□□□ -1.96
CDH13-209ENST00000567109 FAT2Q9NYQ8 4349 aa2.79□□□□□ -1.96
CDH13-209ENST00000567109 VPS13DQ5THJ4 4388 aa2.78□□□□□ -1.96
CDH13-209ENST00000567109 LORP23490 312 aaPredicted RBP2.78□□□□□ -1.96
CDH13-209ENST00000567109 ANK2Q01484 3957 aa2.78□□□□□ -1.96
CDH13-209ENST00000567109 FAT1Q14517 4588 aa2.78□□□□□ -1.96
CDH13-209ENST00000567109 KRTAP3-3Q9BYR6 98 aa2.77□□□□□ -1.97
CDH13-209ENST00000567109 KRTAP8-1Q8IUC2 63 aa2.76□□□□□ -1.97
CDH13-209ENST00000567109 KRTAP17-1Q9BYP8 105 aa2.76□□□□□ -1.97
CDH13-209ENST00000567109 DNAH1Q9P2D7 4330 aa2.75□□□□□ -1.97
CDH13-209ENST00000567109 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
CDH13-209ENST00000567109 KRTAP12-3P60328 96 aa2.73□□□□□ -1.97
CDH13-209ENST00000567109 STARD9Q9P2P6 4700 aa2.72□□□□□ -1.97
CDH13-209ENST00000567109 KMT2AQ03164 3969 aa2.72□□□□□ -1.97
CDH13-209ENST00000567109 DNAH8Q96JB1 4490 aa2.71□□□□□ -1.98
CDH13-209ENST00000567109 FAT4Q6V0I7 4981 aa2.69□□□□□ -1.98
CDH13-209ENST00000567109 VPS13BQ7Z7G8 4022 aa2.67□□□□□ -1.98
CDH13-209ENST00000567109 KRTAP4-1Q9BYQ7 146 aa2.67□□□□□ -1.98
CDH13-209ENST00000567109 USH2AO75445 5202 aa2.67□□□□□ -1.98
CDH13-209ENST00000567109 MT1HP80294 61 aa2.66□□□□□ -1.98
CDH13-209ENST00000567109 LCE3AQ5TA76 89 aa2.65□□□□□ -1.98
CDH13-209ENST00000567109 MT2AP02795 61 aa2.61□□□□□ -1.99
CDH13-209ENST00000567109 KRTAP10-7P60409 375 aaPredicted RBP2.61□□□□□ -1.99
CDH13-209ENST00000567109 HECTD4Q9Y4D8 3996 aa2.6□□□□□ -1.99
CDH13-209ENST00000567109 LRP2P98164 4655 aa2.58□□□□□ -2
CDH13-209ENST00000567109 PKHD1L1Q86WI1 4243 aa2.58□□□□□ -2
CDH13-209ENST00000567109 SPRR2FQ96RM1 72 aa2.56□□□□□ -2
CDH13-209ENST00000567109 PRKDCP78527 4128 aaKnown RBP2.55□□□□□ -2
CDH13-209ENST00000567109 FLGP20930 4061 aaPredicted RBP2.54□□□□□ -2
CDH13-209ENST00000567109 MT1FP04733 61 aa2.52□□□□□ -2.01
CDH13-209ENST00000567109 SPRR5A0A1B0GTR4 108 aa2.52□□□□□ -2.01
CDH13-209ENST00000567109 LCE2CQ5TA81 110 aa2.51□□□□□ -2.01
CDH13-209ENST00000567109 SPRR2GQ9BYE4 73 aa2.51□□□□□ -2.01
CDH13-209ENST00000567109 LRP1Q07954 4544 aaKnown RBP2.5□□□□□ -2.01
CDH13-209ENST00000567109 KRTAP19-8Q3LI54 63 aa2.48□□□□□ -2.01
CDH13-209ENST00000567109 MUC17Q685J3 4493 aa2.48□□□□□ -2.01
CDH13-209ENST00000567109 KRTAP19-2Q3LHN2 52 aa2.48□□□□□ -2.01
CDH13-209ENST00000567109 SPRR2EP22531 72 aa2.47□□□□□ -2.01
CDH13-209ENST00000567109 SPRR2BP35325 72 aa2.47□□□□□ -2.01
CDH13-209ENST00000567109 SPRR2AP35326 72 aa2.47□□□□□ -2.01
CDH13-209ENST00000567109 LCE2AQ5TA79 106 aaPredicted RBP2.43□□□□□ -2.02
CDH13-209ENST00000567109 LCE2DQ5TA82 110 aaPredicted RBP2.43□□□□□ -2.02
CDH13-209ENST00000567109 KRTAP9-8Q9BYQ0 159 aa2.4□□□□□ -2.02
CDH13-209ENST00000567109 SPRR2DP22532 72 aa2.4□□□□□ -2.03
CDH13-209ENST00000567109 KRTAP9-3Q9BYQ3 159 aa2.4□□□□□ -2.03
CDH13-209ENST00000567109 KRTAP19-1Q8IUB9 90 aa2.38□□□□□ -2.03
CDH13-209ENST00000567109 PKHD1P08F94 4074 aa2.38□□□□□ -2.03
CDH13-209ENST00000567109 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
CDH13-209ENST00000567109 LCE2BO14633 110 aa2.37□□□□□ -2.03
CDH13-209ENST00000567109 MT1BP07438 61 aa2.36□□□□□ -2.03
CDH13-209ENST00000567109 MT3P25713 68 aa2.36□□□□□ -2.03
CDH13-209ENST00000567109 PKD1P98161 4303 aa2.36□□□□□ -2.03
CDH13-209ENST00000567109 KRTAP12-4P60329 112 aa2.35□□□□□ -2.03
CDH13-209ENST00000567109 LCE3CQ5T5A8 94 aa2.34□□□□□ -2.03
CDH13-209ENST00000567109 TNXBP22105 4242 aa2.34□□□□□ -2.03
CDH13-209ENST00000567109 SSPOA2VEC9 5147 aa2.34□□□□□ -2.04
CDH13-209ENST00000567109 LCE3BQ5TA77 95 aa2.33□□□□□ -2.04
CDH13-209ENST00000567109 MUC2Q02817 5179 aa2.33□□□□□ -2.04
CDH13-209ENST00000567109 NEBP20929 6669 aa2.3□□□□□ -2.04
CDH13-209ENST00000567109 KRTAP19-6Q3LI70 58 aa2.29□□□□□ -2.04
CDH13-209ENST00000567109 FSIP2Q5CZC0 6907 aa2.27□□□□□ -2.05
CDH13-209ENST00000567109 MT1XP80297 61 aa2.25□□□□□ -2.05
CDH13-209ENST00000567109 KRTAP9-2Q9BYQ4 174 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms