RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 KMT2CQ8NEZ4 4911 aaKnown RBP7.39□□□□□ -1.23
CDH1-209ENST00000566510 KRTAP21-3Q3LHN1 58 aa7.39□□□□□ -1.23
CDH1-209ENST00000566510 HSPG2P98160 4391 aa7.37□□□□□ -1.23
CDH1-209ENST00000566510 A0A0A0MQY5 61 aa7.37□□□□□ -1.23
CDH1-209ENST00000566510 RYR2Q92736 4967 aa7.37□□□□□ -1.23
CDH1-209ENST00000566510 FAT3Q8TDW7 4589 aa7.37□□□□□ -1.23
CDH1-209ENST00000566510 CRIPTQ9P021 101 aa7.35□□□□□ -1.23
CDH1-209ENST00000566510 TNXBP22105 4242 aa7.35□□□□□ -1.23
CDH1-209ENST00000566510 MYCBP2O75592 4640 aa7.35□□□□□ -1.23
CDH1-209ENST00000566510 KRTAP25-1Q3LHN0 102 aa7.34□□□□□ -1.24
CDH1-209ENST00000566510 Q5VSD8 79 aa7.34□□□□□ -1.24
CDH1-209ENST00000566510 KRTAP10-8P60410 259 aa7.33□□□□□ -1.24
CDH1-209ENST00000566510 RPL37P61927 97 aaKnown RBP7.33□□□□□ -1.24
CDH1-209ENST00000566510 A0A0D9SG42 100 aa7.32□□□□□ -1.24
CDH1-209ENST00000566510 XP32Q5T750 250 aa7.3□□□□□ -1.24
CDH1-209ENST00000566510 S4R3F8 94 aa7.29□□□□□ -1.24
CDH1-209ENST00000566510 KRTAP10-6P60371 365 aaPredicted RBP7.28□□□□□ -1.24
CDH1-209ENST00000566510 KRTAP13-4Q3LI77 160 aa7.25□□□□□ -1.25
CDH1-209ENST00000566510 ROMO1P60602 79 aa7.2□□□□□ -1.26
CDH1-209ENST00000566510 P0C880 135 aa7.19□□□□□ -1.26
CDH1-209ENST00000566510 KRTAP17-1Q9BYP8 105 aa7.14□□□□□ -1.27
CDH1-209ENST00000566510 LPAP08519 4548 aa7.13□□□□□ -1.27
CDH1-209ENST00000566510 RYR1P21817 5038 aa7.09□□□□□ -1.27
CDH1-209ENST00000566510 RYR3Q15413 4870 aa7.09□□□□□ -1.27
CDH1-209ENST00000566510 MT1HL1P0DM35 61 aa7.08□□□□□ -1.28
CDH1-209ENST00000566510 KIAA1109Q2LD37 5005 aa7.08□□□□□ -1.28
CDH1-209ENST00000566510 LRP2P98164 4655 aa7.06□□□□□ -1.28
CDH1-209ENST00000566510 SPINT4Q6UDR6 99 aa7.05□□□□□ -1.28
CDH1-209ENST00000566510 KRTAP12-2P59991 146 aa7.04□□□□□ -1.28
CDH1-209ENST00000566510 C10orf95Q9H7T3 257 aa7.03□□□□□ -1.28
CDH1-209ENST00000566510 TPRXLQ17RH7 258 aa7.02□□□□□ -1.29
CDH1-209ENST00000566510 KRTAP12-1P59990 96 aa6.95□□□□□ -1.3
CDH1-209ENST00000566510 LCE2BO14633 110 aa6.94□□□□□ -1.3
CDH1-209ENST00000566510 ABCA13Q86UQ4 5058 aa6.9□□□□□ -1.3
CDH1-209ENST00000566510 M0QZ58 72 aa6.9□□□□□ -1.3
CDH1-209ENST00000566510 LCE2CQ5TA81 110 aa6.89□□□□□ -1.31
CDH1-209ENST00000566510 EPPK1P58107 5090 aaKnown RBP6.85□□□□□ -1.31
CDH1-209ENST00000566510 R4GN34 69 aa6.82□□□□□ -1.32
CDH1-209ENST00000566510 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
CDH1-209ENST00000566510 LCE2AQ5TA79 106 aaPredicted RBP6.78□□□□□ -1.32
CDH1-209ENST00000566510 SEC61BP60468 96 aaKnown RBP6.73□□□□□ -1.33
CDH1-209ENST00000566510 LORP23490 312 aaPredicted RBP6.68□□□□□ -1.34
CDH1-209ENST00000566510 KRTAP15-1Q3LI76 137 aa6.68□□□□□ -1.34
CDH1-209ENST00000566510 MUC17Q685J3 4493 aa6.65□□□□□ -1.34
CDH1-209ENST00000566510 KRTAP4-1Q9BYQ7 146 aa6.64□□□□□ -1.35
CDH1-209ENST00000566510 NDUFAF8A1L188 74 aa6.63□□□□□ -1.35
CDH1-209ENST00000566510 MUC2Q02817 5179 aa6.55□□□□□ -1.36
CDH1-209ENST00000566510 CAMK2N1Q7Z7J9 78 aa6.5□□□□□ -1.37
CDH1-209ENST00000566510 HERC2O95714 4834 aa6.48□□□□□ -1.37
CDH1-209ENST00000566510 KRTAP19-2Q3LHN2 52 aa6.45□□□□□ -1.38
CDH1-209ENST00000566510 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
CDH1-209ENST00000566510 FLGP20930 4061 aaPredicted RBP6.33□□□□□ -1.4
CDH1-209ENST00000566510 PP632Q6XCG6 107 aa6.3□□□□□ -1.4
CDH1-209ENST00000566510 PCLOQ9Y6V0 5065 aa6.26□□□□□ -1.41
CDH1-209ENST00000566510 BIRC6Q9NR09 4857 aa6.23□□□□□ -1.41
CDH1-209ENST00000566510 HERC1Q15751 4861 aa6.23□□□□□ -1.41
CDH1-209ENST00000566510 TNP1P09430 55 aa6.21□□□□□ -1.42
CDH1-209ENST00000566510 FAT4Q6V0I7 4981 aa6.19□□□□□ -1.42
CDH1-209ENST00000566510 LUZP6Q538Z0 58 aa6.18□□□□□ -1.42
CDH1-209ENST00000566510 M0R2T5 61 aa6.11□□□□□ -1.43
CDH1-209ENST00000566510 HMCN2Q8NDA2 5059 aa6.08□□□□□ -1.44
CDH1-209ENST00000566510 RNF213Q63HN8 5207 aa6.01□□□□□ -1.45
CDH1-209ENST00000566510 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
CDH1-209ENST00000566510 SPRR2GQ9BYE4 73 aa6□□□□□ -1.45
CDH1-209ENST00000566510 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
CDH1-209ENST00000566510 KRTAP10-10P60014 251 aa5.94□□□□□ -1.46
CDH1-209ENST00000566510 MT1HP80294 61 aa5.92□□□□□ -1.46
CDH1-209ENST00000566510 UBR4Q5T4S7 5183 aa5.92□□□□□ -1.46
CDH1-209ENST00000566510 MT1FP04733 61 aa5.87□□□□□ -1.47
CDH1-209ENST00000566510 LCE3AQ5TA76 89 aa5.87□□□□□ -1.47
CDH1-209ENST00000566510 MT2AP02795 61 aa5.85□□□□□ -1.47
CDH1-209ENST00000566510 SPRR5A0A1B0GTR4 108 aa5.84□□□□□ -1.47
CDH1-209ENST00000566510 KRTAP9-8Q9BYQ0 159 aa5.79□□□□□ -1.48
CDH1-209ENST00000566510 KRTAP19-8Q3LI54 63 aa5.69□□□□□ -1.5
CDH1-209ENST00000566510 KRTAP10-5P60370 271 aa5.67□□□□□ -1.5
CDH1-209ENST00000566510 MT1BP07438 61 aa5.66□□□□□ -1.5
CDH1-209ENST00000566510 MT1XP80297 61 aa5.65□□□□□ -1.5
CDH1-209ENST00000566510 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
CDH1-209ENST00000566510 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
CDH1-209ENST00000566510 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
CDH1-209ENST00000566510 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
CDH1-209ENST00000566510 KRTAP9-3Q9BYQ3 159 aa5.53□□□□□ -1.52
CDH1-209ENST00000566510 PRO2289Q9P1D8 64 aa5.47□□□□□ -1.53
CDH1-209ENST00000566510 USH2AO75445 5202 aa5.4□□□□□ -1.54
CDH1-209ENST00000566510 KMT2DO14686 5537 aa5.36□□□□□ -1.55
CDH1-209ENST00000566510 KRTAP19-5Q3LI72 72 aa5.33□□□□□ -1.56
CDH1-209ENST00000566510 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
CDH1-209ENST00000566510 INE1O15225 51 aa5.23□□□□□ -1.57
CDH1-209ENST00000566510 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
CDH1-209ENST00000566510 KRTAP4-8Q9BYQ9 185 aa5.22□□□□□ -1.57
CDH1-209ENST00000566510 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
CDH1-209ENST00000566510 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
CDH1-209ENST00000566510 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
CDH1-209ENST00000566510 FSIP2Q5CZC0 6907 aa4.91□□□□□ -1.62
CDH1-209ENST00000566510 MT1LQ93083 61 aa4.9□□□□□ -1.63
CDH1-209ENST00000566510 MT1EP04732 61 aa4.88□□□□□ -1.63
CDH1-209ENST00000566510 SSPOA2VEC9 5147 aa4.87□□□□□ -1.63
CDH1-209ENST00000566510 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.63
CDH1-209ENST00000566510 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.63
CDH1-209ENST00000566510 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms