RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 LINC00208Q96KT6 92 aa5.87□□□□□ -1.47
UBFD1-205ENST00000566136 PRR15LQ9BU68 103 aa5.87□□□□□ -1.47
UBFD1-205ENST00000566136 VPS13BQ7Z7G8 4022 aa5.87□□□□□ -1.47
UBFD1-205ENST00000566136 NDUFB1O75438 58 aa5.86□□□□□ -1.47
UBFD1-205ENST00000566136 H0Y9P7 68 aa5.86□□□□□ -1.47
UBFD1-205ENST00000566136 SMR3BP02814 79 aaPredicted RBP5.86□□□□□ -1.47
UBFD1-205ENST00000566136 LCE4AQ5TA78 99 aa5.85□□□□□ -1.47
UBFD1-205ENST00000566136 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
UBFD1-205ENST00000566136 Q5VSD8 79 aa5.84□□□□□ -1.47
UBFD1-205ENST00000566136 MYCBP2O75592 4640 aa5.84□□□□□ -1.47
UBFD1-205ENST00000566136 FLG2Q5D862 2391 aaPredicted RBP5.84□□□□□ -1.47
UBFD1-205ENST00000566136 SPAG11AQ6PDA7 123 aa5.84□□□□□ -1.48
UBFD1-205ENST00000566136 DMBT1Q9UGM3 2413 aaPredicted RBP5.83□□□□□ -1.48
UBFD1-205ENST00000566136 SPINK6Q6UWN8 80 aa5.82□□□□□ -1.48
UBFD1-205ENST00000566136 KRTAP9-6A0A140TA67 174 aa5.8□□□□□ -1.48
UBFD1-205ENST00000566136 KRTAP9-7A8MTY7 169 aa5.8□□□□□ -1.48
UBFD1-205ENST00000566136 LINC00304Q8N9R0 145 aa5.79□□□□□ -1.48
UBFD1-205ENST00000566136 DMAC1Q96GE9 116 aa5.79□□□□□ -1.48
UBFD1-205ENST00000566136 Q6ZSA8 131 aa5.76□□□□□ -1.49
UBFD1-205ENST00000566136 PCOTHQ58A44 107 aa5.75□□□□□ -1.49
UBFD1-205ENST00000566136 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
UBFD1-205ENST00000566136 KRTAP13-2Q52LG2 175 aa5.74□□□□□ -1.49
UBFD1-205ENST00000566136 MRPL34Q9BQ48 92 aaKnown RBP5.74□□□□□ -1.49
UBFD1-205ENST00000566136 SSBP3-AS1Q7Z2R9 100 aa5.73□□□□□ -1.49
UBFD1-205ENST00000566136 TP53AIP1Q9HCN2 124 aa5.73□□□□□ -1.49
UBFD1-205ENST00000566136 LRP1Q07954 4544 aaKnown RBP5.71□□□□□ -1.5
UBFD1-205ENST00000566136 KRTAP1-4P0C5Y4 121 aa5.69□□□□□ -1.5
UBFD1-205ENST00000566136 FAT3Q8TDW7 4589 aa5.68□□□□□ -1.5
UBFD1-205ENST00000566136 KRTAP10-4P60372 401 aaPredicted RBP5.67□□□□□ -1.5
UBFD1-205ENST00000566136 PKHD1L1Q86WI1 4243 aa5.66□□□□□ -1.5
UBFD1-205ENST00000566136 COA5Q86WW8 74 aa5.64□□□□□ -1.51
UBFD1-205ENST00000566136 KRTAP13-3Q3SY46 172 aa5.63□□□□□ -1.51
UBFD1-205ENST00000566136 HMCN2Q8NDA2 5059 aa5.62□□□□□ -1.51
UBFD1-205ENST00000566136 LINC01558Q9Y6Z2 57 aa5.6□□□□□ -1.51
UBFD1-205ENST00000566136 SPINK7P58062 85 aa5.58□□□□□ -1.52
UBFD1-205ENST00000566136 UBR4Q5T4S7 5183 aa5.56□□□□□ -1.52
UBFD1-205ENST00000566136 SPINK1P00995 79 aa5.54□□□□□ -1.52
UBFD1-205ENST00000566136 MT1HL1P0DM35 61 aa5.52□□□□□ -1.53
UBFD1-205ENST00000566136 TNXBP22105 4242 aa5.51□□□□□ -1.53
UBFD1-205ENST00000566136 LCE1FQ5T754 118 aa5.51□□□□□ -1.53
UBFD1-205ENST00000566136 ACYP2P14621 99 aa5.47□□□□□ -1.53
UBFD1-205ENST00000566136 C9orf92A6NGG3 77 aa5.45□□□□□ -1.54
UBFD1-205ENST00000566136 LRP2P98164 4655 aa5.44□□□□□ -1.54
UBFD1-205ENST00000566136 RPS29P62273 56 aaKnown RBP5.43□□□□□ -1.54
UBFD1-205ENST00000566136 XP32Q5T750 250 aa5.39□□□□□ -1.55
UBFD1-205ENST00000566136 RNF213Q63HN8 5207 aa5.38□□□□□ -1.55
UBFD1-205ENST00000566136 UQCR11O14957 56 aa5.35□□□□□ -1.55
UBFD1-205ENST00000566136 LPAP08519 4548 aa5.32□□□□□ -1.56
UBFD1-205ENST00000566136 A0A1B0GU69 56 aa5.31□□□□□ -1.56
UBFD1-205ENST00000566136 KRTAP9-3Q9BYQ3 159 aa5.29□□□□□ -1.56
UBFD1-205ENST00000566136 KRTAP2-2Q9BYT5 123 aa5.29□□□□□ -1.56
UBFD1-205ENST00000566136 KRTAP10-6P60371 365 aaPredicted RBP5.28□□□□□ -1.56
UBFD1-205ENST00000566136 KRTAP19-1Q8IUB9 90 aa5.26□□□□□ -1.57
UBFD1-205ENST00000566136 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
UBFD1-205ENST00000566136 SPATA8Q6RVD6 105 aa5.21□□□□□ -1.57
UBFD1-205ENST00000566136 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
UBFD1-205ENST00000566136 MUC2Q02817 5179 aa5.17□□□□□ -1.58
UBFD1-205ENST00000566136 COX6B2Q6YFQ2 88 aa5.15□□□□□ -1.59
UBFD1-205ENST00000566136 INE1O15225 51 aa5.14□□□□□ -1.59
UBFD1-205ENST00000566136 RPL37P61927 97 aaKnown RBP5.14□□□□□ -1.59
UBFD1-205ENST00000566136 CRIPTQ9P021 101 aa5.09□□□□□ -1.59
UBFD1-205ENST00000566136 H0YAA0 97 aa5.06□□□□□ -1.6
UBFD1-205ENST00000566136 FAT4Q6V0I7 4981 aa5.04□□□□□ -1.6
UBFD1-205ENST00000566136 MUC17Q685J3 4493 aa5.04□□□□□ -1.6
UBFD1-205ENST00000566136 H1FX-AS1Q4G0G2 97 aa5.03□□□□□ -1.6
UBFD1-205ENST00000566136 S4R3F8 94 aa4.99□□□□□ -1.61
UBFD1-205ENST00000566136 KRTAP9-2Q9BYQ4 174 aa4.91□□□□□ -1.62
UBFD1-205ENST00000566136 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.62
UBFD1-205ENST00000566136 PLAC4Q8WY50 150 aa4.89□□□□□ -1.63
UBFD1-205ENST00000566136 KRTAP4-1Q9BYQ7 146 aa4.89□□□□□ -1.63
UBFD1-205ENST00000566136 A0A0D9SG42 100 aa4.88□□□□□ -1.63
UBFD1-205ENST00000566136 MT3P25713 68 aa4.85□□□□□ -1.63
UBFD1-205ENST00000566136 LCE3EQ5T5B0 92 aa4.82□□□□□ -1.64
UBFD1-205ENST00000566136 PP632Q6XCG6 107 aa4.82□□□□□ -1.64
UBFD1-205ENST00000566136 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
UBFD1-205ENST00000566136 KRTAP4-12Q9BQ66 201 aa4.78□□□□□ -1.64
UBFD1-205ENST00000566136 KRTAP19-2Q3LHN2 52 aa4.74□□□□□ -1.65
UBFD1-205ENST00000566136 KRTAP12-1P59990 96 aa4.74□□□□□ -1.65
UBFD1-205ENST00000566136 KRTAP10-12P60413 245 aa4.73□□□□□ -1.65
UBFD1-205ENST00000566136 KRTAP12-2P59991 146 aa4.73□□□□□ -1.65
UBFD1-205ENST00000566136 MT1HP80294 61 aa4.7□□□□□ -1.66
UBFD1-205ENST00000566136 FSIP2Q5CZC0 6907 aa4.7□□□□□ -1.66
UBFD1-205ENST00000566136 M0QZ58 72 aa4.66□□□□□ -1.66
UBFD1-205ENST00000566136 FLGP20930 4061 aaPredicted RBP4.64□□□□□ -1.67
UBFD1-205ENST00000566136 C10orf95Q9H7T3 257 aa4.63□□□□□ -1.67
UBFD1-205ENST00000566136 CRCT1Q9UGL9 99 aa4.63□□□□□ -1.67
UBFD1-205ENST00000566136 M0R2T5 61 aa4.61□□□□□ -1.67
UBFD1-205ENST00000566136 LCE1DQ5T752 114 aa4.57□□□□□ -1.68
UBFD1-205ENST00000566136 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
UBFD1-205ENST00000566136 KRTAP10-10P60014 251 aa4.53□□□□□ -1.68
UBFD1-205ENST00000566136 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
UBFD1-205ENST00000566136 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.46□□□□□ -1.7
UBFD1-205ENST00000566136 USH2AO75445 5202 aa4.43□□□□□ -1.7
UBFD1-205ENST00000566136 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
UBFD1-205ENST00000566136 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
UBFD1-205ENST00000566136 SSPOA2VEC9 5147 aa4.41□□□□□ -1.7
UBFD1-205ENST00000566136 KRTAP4-8Q9BYQ9 185 aa4.4□□□□□ -1.71
UBFD1-205ENST00000566136 MT2AP02795 61 aa4.37□□□□□ -1.71
UBFD1-205ENST00000566136 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
UBFD1-205ENST00000566136 MT1FP04733 61 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms