RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 MYCBP2O75592 4640 aa11.65□□□□□ -0.55
SPSB3-206ENST00000564709 RYR1P21817 5038 aa11.63□□□□□ -0.55
SPSB3-206ENST00000564709 RPL37P61927 97 aaKnown RBP11.61□□□□□ -0.55
SPSB3-206ENST00000564709 XP32Q5T750 250 aa11.6□□□□□ -0.55
SPSB3-206ENST00000564709 A0A1B0GU33 70 aa11.6□□□□□ -0.55
SPSB3-206ENST00000564709 H1FX-AS1Q4G0G2 97 aa11.57□□□□□ -0.56
SPSB3-206ENST00000564709 H3BS24 57 aa11.53□□□□□ -0.56
SPSB3-206ENST00000564709 KIAA1109Q2LD37 5005 aa11.53□□□□□ -0.56
SPSB3-206ENST00000564709 MT1HL1P0DM35 61 aa11.48□□□□□ -0.57
SPSB3-206ENST00000564709 KRTAP3-3Q9BYR6 98 aa11.44□□□□□ -0.58
SPSB3-206ENST00000564709 S4R3F8 94 aa11.35□□□□□ -0.59
SPSB3-206ENST00000564709 EPPK1P58107 5090 aaKnown RBP11.34□□□□□ -0.59
SPSB3-206ENST00000564709 CSAG1Q6PB30 78 aa11.33□□□□□ -0.6
SPSB3-206ENST00000564709 LINC01554Q52M75 96 aa11.32□□□□□ -0.6
SPSB3-206ENST00000564709 LPAP08519 4548 aa11.31□□□□□ -0.6
SPSB3-206ENST00000564709 KRTAP10-6P60371 365 aaPredicted RBP11.31□□□□□ -0.6
SPSB3-206ENST00000564709 KRTAP3-2Q9BYR7 98 aa11.24□□□□□ -0.61
SPSB3-206ENST00000564709 LRP2P98164 4655 aa11.24□□□□□ -0.61
SPSB3-206ENST00000564709 KRTAP13-4Q3LI77 160 aa11.23□□□□□ -0.61
SPSB3-206ENST00000564709 TPRXLQ17RH7 258 aa11.15□□□□□ -0.62
SPSB3-206ENST00000564709 A0A0D9SG42 100 aa11.15□□□□□ -0.62
SPSB3-206ENST00000564709 P0C880 135 aa11.15□□□□□ -0.62
SPSB3-206ENST00000564709 K7ERS5 55 aa11.14□□□□□ -0.63
SPSB3-206ENST00000564709 KRTAP4-5Q9BYR2 181 aa11.12□□□□□ -0.63
SPSB3-206ENST00000564709 ABCA13Q86UQ4 5058 aa11.11□□□□□ -0.63
SPSB3-206ENST00000564709 CRIPTQ9P021 101 aa11.01□□□□□ -0.65
SPSB3-206ENST00000564709 KRTAP25-1Q3LHN0 102 aa11□□□□□ -0.65
SPSB3-206ENST00000564709 ROMO1P60602 79 aa10.91□□□□□ -0.66
SPSB3-206ENST00000564709 BIRC6Q9NR09 4857 aa10.88□□□□□ -0.67
SPSB3-206ENST00000564709 KRTAP12-2P59991 146 aa10.84□□□□□ -0.67
SPSB3-206ENST00000564709 HERC2O95714 4834 aa10.77□□□□□ -0.69
SPSB3-206ENST00000564709 SPINT4Q6UDR6 99 aa10.76□□□□□ -0.69
SPSB3-206ENST00000564709 MUC17Q685J3 4493 aa10.75□□□□□ -0.69
SPSB3-206ENST00000564709 KRTAP12-1P59990 96 aa10.74□□□□□ -0.69
SPSB3-206ENST00000564709 SEC61BP60468 96 aaKnown RBP10.73□□□□□ -0.69
SPSB3-206ENST00000564709 J3QL48 77 aa10.72□□□□□ -0.69
SPSB3-206ENST00000564709 KRTAP4-1Q9BYQ7 146 aa10.7□□□□□ -0.7
SPSB3-206ENST00000564709 M0QZ58 72 aa10.68□□□□□ -0.7
SPSB3-206ENST00000564709 C10orf95Q9H7T3 257 aa10.63□□□□□ -0.71
SPSB3-206ENST00000564709 R4GN34 69 aa10.53□□□□□ -0.72
SPSB3-206ENST00000564709 LORP23490 312 aaPredicted RBP10.5□□□□□ -0.73
SPSB3-206ENST00000564709 KRTAP19-2Q3LHN2 52 aa10.44□□□□□ -0.74
SPSB3-206ENST00000564709 MUC2Q02817 5179 aa10.37□□□□□ -0.75
SPSB3-206ENST00000564709 PCLOQ9Y6V0 5065 aa10.34□□□□□ -0.75
SPSB3-206ENST00000564709 FLGP20930 4061 aaPredicted RBP10.18□□□□□ -0.78
SPSB3-206ENST00000564709 HERC1Q15751 4861 aa10.17□□□□□ -0.78
SPSB3-206ENST00000564709 HMCN2Q8NDA2 5059 aa10.05□□□□□ -0.8
SPSB3-206ENST00000564709 A0A0A0MQY5 61 aa10.04□□□□□ -0.8
SPSB3-206ENST00000564709 KRTAP15-1Q3LI76 137 aa9.99□□□□□ -0.81
SPSB3-206ENST00000564709 CAMK2N1Q7Z7J9 78 aa9.99□□□□□ -0.81
SPSB3-206ENST00000564709 FAT4Q6V0I7 4981 aa9.88□□□□□ -0.83
SPSB3-206ENST00000564709 LCE2CQ5TA81 110 aa9.87□□□□□ -0.83
SPSB3-206ENST00000564709 NDUFAF8A1L188 74 aa9.81□□□□□ -0.84
SPSB3-206ENST00000564709 M0R2T5 61 aa9.68□□□□□ -0.86
SPSB3-206ENST00000564709 UBR4Q5T4S7 5183 aa9.65□□□□□ -0.87
SPSB3-206ENST00000564709 PLAC4Q8WY50 150 aa9.64□□□□□ -0.87
SPSB3-206ENST00000564709 RNF213Q63HN8 5207 aa9.64□□□□□ -0.87
SPSB3-206ENST00000564709 PP632Q6XCG6 107 aa9.62□□□□□ -0.87
SPSB3-206ENST00000564709 MT1HP80294 61 aa9.62□□□□□ -0.87
SPSB3-206ENST00000564709 KRTAP19-1Q8IUB9 90 aa9.57□□□□□ -0.88
SPSB3-206ENST00000564709 SPRR2GQ9BYE4 73 aa9.57□□□□□ -0.88
SPSB3-206ENST00000564709 TNP1P09430 55 aa9.56□□□□□ -0.88
SPSB3-206ENST00000564709 MT1FP04733 61 aa9.47□□□□□ -0.89
SPSB3-206ENST00000564709 MT2AP02795 61 aa9.45□□□□□ -0.9
SPSB3-206ENST00000564709 KRTAP10-10P60014 251 aa9.44□□□□□ -0.9
SPSB3-206ENST00000564709 LUZP6Q538Z0 58 aa9.42□□□□□ -0.9
SPSB3-206ENST00000564709 KRTAP9-8Q9BYQ0 159 aa9.37□□□□□ -0.91
SPSB3-206ENST00000564709 KRTAP23-1A1A580 65 aa9.3□□□□□ -0.92
SPSB3-206ENST00000564709 KRTAP19-8Q3LI54 63 aa9.16□□□□□ -0.94
SPSB3-206ENST00000564709 LCE3AQ5TA76 89 aa9.14□□□□□ -0.95
SPSB3-206ENST00000564709 MT1BP07438 61 aa9.1□□□□□ -0.95
SPSB3-206ENST00000564709 KRTAP10-5P60370 271 aa9.03□□□□□ -0.96
SPSB3-206ENST00000564709 MT1XP80297 61 aa9.01□□□□□ -0.97
SPSB3-206ENST00000564709 KRTAP9-3Q9BYQ3 159 aa8.97□□□□□ -0.97
SPSB3-206ENST00000564709 SPRR5A0A1B0GTR4 108 aa8.96□□□□□ -0.97
SPSB3-206ENST00000564709 KRTAP8-1Q8IUC2 63 aa8.82□□□□□ -1
SPSB3-206ENST00000564709 LCE2AQ5TA79 106 aaPredicted RBP8.81□□□□□ -1
SPSB3-206ENST00000564709 KRTAP10-12P60413 245 aa8.8□□□□□ -1
SPSB3-206ENST00000564709 KRTAP10-7P60409 375 aaPredicted RBP8.79□□□□□ -1
SPSB3-206ENST00000564709 LCE2BO14633 110 aa8.67□□□□□ -1.02
SPSB3-206ENST00000564709 KRTAP12-3P60328 96 aa8.67□□□□□ -1.02
SPSB3-206ENST00000564709 PRO2289Q9P1D8 64 aa8.64□□□□□ -1.03
SPSB3-206ENST00000564709 USH2AO75445 5202 aa8.57□□□□□ -1.04
SPSB3-206ENST00000564709 KRTAP19-5Q3LI72 72 aa8.39□□□□□ -1.07
SPSB3-206ENST00000564709 KMT2DO14686 5537 aa8.39□□□□□ -1.07
SPSB3-206ENST00000564709 KRTAP4-8A0A0G2JLE6 195 aa8.3□□□□□ -1.08
SPSB3-206ENST00000564709 KRTAP4-8Q9BYQ9 185 aa8.3□□□□□ -1.08
SPSB3-206ENST00000564709 LCE3CQ5T5A8 94 aa8.14□□□□□ -1.11
SPSB3-206ENST00000564709 INE1O15225 51 aa8.03□□□□□ -1.12
SPSB3-206ENST00000564709 KRTAP19-7Q3SYF9 63 aa8.03□□□□□ -1.12
SPSB3-206ENST00000564709 SSPOA2VEC9 5147 aa7.99□□□□□ -1.13
SPSB3-206ENST00000564709 LCE2DQ5TA82 110 aaPredicted RBP7.96□□□□□ -1.14
SPSB3-206ENST00000564709 KRTAP4-7Q9BYR0 210 aa7.91□□□□□ -1.14
SPSB3-206ENST00000564709 KRTAP9-6A8MVA2 160 aa7.9□□□□□ -1.15
SPSB3-206ENST00000564709 MT1EP04732 61 aa7.8□□□□□ -1.16
SPSB3-206ENST00000564709 KRTAP19-6Q3LI70 58 aa7.8□□□□□ -1.16
SPSB3-206ENST00000564709 FSIP2Q5CZC0 6907 aa7.78□□□□□ -1.16
SPSB3-206ENST00000564709 MT1LQ93083 61 aa7.78□□□□□ -1.16
SPSB3-206ENST00000564709 KRTAP9-2Q9BYQ4 174 aa7.61□□□□□ -1.19
SPSB3-206ENST00000564709 KRTAP19-4Q3LI73 84 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms