RNA–Protein interactions for RNA: ENST00000564674.5

DENND4A-206, Transcript of DENN domain containing 4A, humanhuman

TSL 1 (best)

Gene DENND4A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-206ENST00000564674 LRP1Q07954 4544 aaKnown RBP9.54□□□□□ -0.88
DENND4A-206ENST00000564674 RPL37P61927 97 aaKnown RBP9.52□□□□□ -0.89
DENND4A-206ENST00000564674 SPINT4Q6UDR6 99 aa9.52□□□□□ -0.89
DENND4A-206ENST00000564674 KRTAP10-8P60410 259 aa9.49□□□□□ -0.89
DENND4A-206ENST00000564674 KRTAP10-6P60371 365 aaPredicted RBP9.49□□□□□ -0.89
DENND4A-206ENST00000564674 P0C880 135 aa9.47□□□□□ -0.89
DENND4A-206ENST00000564674 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
DENND4A-206ENST00000564674 KRTAP10-4P60372 401 aaPredicted RBP9.43□□□□□ -0.9
DENND4A-206ENST00000564674 TPRXLQ17RH7 258 aa9.43□□□□□ -0.9
DENND4A-206ENST00000564674 HSPG2P98160 4391 aa9.42□□□□□ -0.9
DENND4A-206ENST00000564674 S4R3F8 94 aa9.4□□□□□ -0.9
DENND4A-206ENST00000564674 APOBP04114 4563 aaKnown RBP9.4□□□□□ -0.91
DENND4A-206ENST00000564674 RYR3Q15413 4870 aa9.4□□□□□ -0.91
DENND4A-206ENST00000564674 KRTAP3-2Q9BYR7 98 aa9.37□□□□□ -0.91
DENND4A-206ENST00000564674 PKHD1L1Q86WI1 4243 aa9.35□□□□□ -0.91
DENND4A-206ENST00000564674 KIAA1109Q2LD37 5005 aa9.33□□□□□ -0.92
DENND4A-206ENST00000564674 RYR2Q92736 4967 aa9.32□□□□□ -0.92
DENND4A-206ENST00000564674 KRTAP12-2P59991 146 aa9.3□□□□□ -0.92
DENND4A-206ENST00000564674 A0A1B0GVY2 172 aa9.29□□□□□ -0.92
DENND4A-206ENST00000564674 XP32Q5T750 250 aa9.27□□□□□ -0.92
DENND4A-206ENST00000564674 Q5VSD8 79 aa9.27□□□□□ -0.93
DENND4A-206ENST00000564674 FAT3Q8TDW7 4589 aa9.26□□□□□ -0.93
DENND4A-206ENST00000564674 LPAP08519 4548 aa9.21□□□□□ -0.93
DENND4A-206ENST00000564674 NDUFAF8A1L188 74 aa9.2□□□□□ -0.94
DENND4A-206ENST00000564674 EPPK1P58107 5090 aaKnown RBP9.19□□□□□ -0.94
DENND4A-206ENST00000564674 KRTAP12-1P59990 96 aa9.1□□□□□ -0.95
DENND4A-206ENST00000564674 TNXBP22105 4242 aa9.09□□□□□ -0.95
DENND4A-206ENST00000564674 LRP2P98164 4655 aa9.08□□□□□ -0.96
DENND4A-206ENST00000564674 KRTAP4-5Q9BYR2 181 aa9.06□□□□□ -0.96
DENND4A-206ENST00000564674 KRTAP17-1Q9BYP8 105 aa9.05□□□□□ -0.96
DENND4A-206ENST00000564674 RYR1P21817 5038 aa8.99□□□□□ -0.97
DENND4A-206ENST00000564674 J3QL48 77 aa8.97□□□□□ -0.97
DENND4A-206ENST00000564674 M0QZ58 72 aa8.96□□□□□ -0.97
DENND4A-206ENST00000564674 KRTAP15-1Q3LI76 137 aa8.96□□□□□ -0.97
DENND4A-206ENST00000564674 R4GN34 69 aa8.87□□□□□ -0.99
DENND4A-206ENST00000564674 MT1HL1P0DM35 61 aa8.83□□□□□ -1
DENND4A-206ENST00000564674 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
DENND4A-206ENST00000564674 ABCA13Q86UQ4 5058 aa8.73□□□□□ -1.01
DENND4A-206ENST00000564674 HERC2O95714 4834 aa8.69□□□□□ -1.02
DENND4A-206ENST00000564674 PLAC4Q8WY50 150 aa8.58□□□□□ -1.04
DENND4A-206ENST00000564674 CAMK2N1Q7Z7J9 78 aa8.55□□□□□ -1.04
DENND4A-206ENST00000564674 BIRC6Q9NR09 4857 aa8.53□□□□□ -1.04
DENND4A-206ENST00000564674 MUC2Q02817 5179 aa8.5□□□□□ -1.05
DENND4A-206ENST00000564674 PCLOQ9Y6V0 5065 aa8.48□□□□□ -1.05
DENND4A-206ENST00000564674 HERC1Q15751 4861 aa8.48□□□□□ -1.05
DENND4A-206ENST00000564674 KRTAP4-1Q9BYQ7 146 aa8.47□□□□□ -1.05
DENND4A-206ENST00000564674 SEC61BP60468 96 aaKnown RBP8.39□□□□□ -1.07
DENND4A-206ENST00000564674 LUZP6Q538Z0 58 aa8.32□□□□□ -1.08
DENND4A-206ENST00000564674 MUC17Q685J3 4493 aa8.28□□□□□ -1.08
DENND4A-206ENST00000564674 RNF213Q63HN8 5207 aa8.21□□□□□ -1.1
DENND4A-206ENST00000564674 UBR4Q5T4S7 5183 aa8.11□□□□□ -1.11
DENND4A-206ENST00000564674 PP632Q6XCG6 107 aa8.1□□□□□ -1.11
DENND4A-206ENST00000564674 TNP1P09430 55 aa8.06□□□□□ -1.12
DENND4A-206ENST00000564674 FAT4Q6V0I7 4981 aa8.05□□□□□ -1.12
DENND4A-206ENST00000564674 KRTAP19-2Q3LHN2 52 aa8.05□□□□□ -1.12
DENND4A-206ENST00000564674 A0A0A0MQY5 61 aa8.02□□□□□ -1.13
DENND4A-206ENST00000564674 M0R2T5 61 aa7.91□□□□□ -1.14
DENND4A-206ENST00000564674 FLGP20930 4061 aaPredicted RBP7.85□□□□□ -1.15
DENND4A-206ENST00000564674 HMCN2Q8NDA2 5059 aa7.83□□□□□ -1.16
DENND4A-206ENST00000564674 LCE3AQ5TA76 89 aa7.68□□□□□ -1.18
DENND4A-206ENST00000564674 KRTAP19-1Q8IUB9 90 aa7.61□□□□□ -1.19
DENND4A-206ENST00000564674 KRTAP10-10P60014 251 aa7.6□□□□□ -1.19
DENND4A-206ENST00000564674 SPRR5A0A1B0GTR4 108 aa7.57□□□□□ -1.2
DENND4A-206ENST00000564674 LCE2CQ5TA81 110 aa7.54□□□□□ -1.2
DENND4A-206ENST00000564674 KRTAP23-1A1A580 65 aa7.5□□□□□ -1.21
DENND4A-206ENST00000564674 SPRR2GQ9BYE4 73 aa7.5□□□□□ -1.21
DENND4A-206ENST00000564674 FSIP2Q5CZC0 6907 aa7.48□□□□□ -1.21
DENND4A-206ENST00000564674 MT1FP04733 61 aa7.44□□□□□ -1.22
DENND4A-206ENST00000564674 MT1HP80294 61 aa7.39□□□□□ -1.23
DENND4A-206ENST00000564674 MT2AP02795 61 aa7.37□□□□□ -1.23
DENND4A-206ENST00000564674 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
DENND4A-206ENST00000564674 KRTAP9-8Q9BYQ0 159 aa7.22□□□□□ -1.25
DENND4A-206ENST00000564674 KRTAP8-1Q8IUC2 63 aa7.2□□□□□ -1.26
DENND4A-206ENST00000564674 KRTAP10-5P60370 271 aa7.2□□□□□ -1.26
DENND4A-206ENST00000564674 KRTAP10-12P60413 245 aa7.2□□□□□ -1.26
DENND4A-206ENST00000564674 MT1XP80297 61 aa7.19□□□□□ -1.26
DENND4A-206ENST00000564674 KRTAP10-7P60409 375 aaPredicted RBP7.17□□□□□ -1.26
DENND4A-206ENST00000564674 MT1BP07438 61 aa7.16□□□□□ -1.26
DENND4A-206ENST00000564674 KMT2DO14686 5537 aa7.14□□□□□ -1.27
DENND4A-206ENST00000564674 USH2AO75445 5202 aa7.11□□□□□ -1.27
DENND4A-206ENST00000564674 PRO2289Q9P1D8 64 aa7.09□□□□□ -1.27
DENND4A-206ENST00000564674 KRTAP19-8Q3LI54 63 aa7.05□□□□□ -1.28
DENND4A-206ENST00000564674 INE1O15225 51 aa6.92□□□□□ -1.3
DENND4A-206ENST00000564674 KRTAP19-5Q3LI72 72 aa6.9□□□□□ -1.31
DENND4A-206ENST00000564674 KRTAP9-3Q9BYQ3 159 aa6.86□□□□□ -1.31
DENND4A-206ENST00000564674 KRTAP4-8A0A0G2JLE6 195 aa6.82□□□□□ -1.32
DENND4A-206ENST00000564674 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
DENND4A-206ENST00000564674 LCE2AQ5TA79 106 aaPredicted RBP6.77□□□□□ -1.33
DENND4A-206ENST00000564674 LCE3CQ5T5A8 94 aa6.75□□□□□ -1.33
DENND4A-206ENST00000564674 KRTAP4-7Q9BYR0 210 aa6.73□□□□□ -1.33
DENND4A-206ENST00000564674 LCE2BO14633 110 aa6.69□□□□□ -1.34
DENND4A-206ENST00000564674 KRTAP9-6A8MVA2 160 aa6.66□□□□□ -1.34
DENND4A-206ENST00000564674 SSPOA2VEC9 5147 aa6.4□□□□□ -1.38
DENND4A-206ENST00000564674 KRTAP19-7Q3SYF9 63 aa6.38□□□□□ -1.39
DENND4A-206ENST00000564674 CRCT1Q9UGL9 99 aa6.3□□□□□ -1.4
DENND4A-206ENST00000564674 KRTAP9-2Q9BYQ4 174 aa6.29□□□□□ -1.4
DENND4A-206ENST00000564674 DSTQ03001 7570 aaKnown RBP6.25□□□□□ -1.41
DENND4A-206ENST00000564674 KRTAP2-3P0C7H8 128 aa6.25□□□□□ -1.41
DENND4A-206ENST00000564674 KRTAP2-4Q9BYR9 128 aa6.25□□□□□ -1.41
DENND4A-206ENST00000564674 KRTAP2-1Q9BYU5 128 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms