RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 KRTAP3-3Q9BYR6 98 aa7.19□□□□□ -1.26
EDC3-206ENST00000563009 CSAG1Q6PB30 78 aa7.18□□□□□ -1.26
EDC3-206ENST00000563009 SERP2Q8N6R1 65 aa7.18□□□□□ -1.26
EDC3-206ENST00000563009 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.26
EDC3-206ENST00000563009 DMAC1Q96GE9 116 aa7.13□□□□□ -1.27
EDC3-206ENST00000563009 SNURFQ9Y675 71 aa7.11□□□□□ -1.27
EDC3-206ENST00000563009 NDUFC1O43677 76 aa7.09□□□□□ -1.27
EDC3-206ENST00000563009 C20orf197Q8N268 126 aa7.09□□□□□ -1.27
EDC3-206ENST00000563009 LCE2BO14633 110 aa7.04□□□□□ -1.28
EDC3-206ENST00000563009 COX7CP15954 63 aa7.03□□□□□ -1.28
EDC3-206ENST00000563009 SPANXA2-OT1Q8N9U9 137 aa7.01□□□□□ -1.29
EDC3-206ENST00000563009 ACYP2P14621 99 aa7□□□□□ -1.29
EDC3-206ENST00000563009 H0YAA0 97 aa6.99□□□□□ -1.29
EDC3-206ENST00000563009 USH2AO75445 5202 aa6.95□□□□□ -1.3
EDC3-206ENST00000563009 ANAPC13Q9BS18 74 aa6.93□□□□□ -1.3
EDC3-206ENST00000563009 KRTAP19-1Q8IUB9 90 aa6.92□□□□□ -1.3
EDC3-206ENST00000563009 SPRR2GQ9BYE4 73 aa6.89□□□□□ -1.31
EDC3-206ENST00000563009 CYSTM1Q9H1C7 97 aa6.89□□□□□ -1.31
EDC3-206ENST00000563009 KRTAP9-7A8MTY7 169 aa6.88□□□□□ -1.31
EDC3-206ENST00000563009 H7BZZ5 65 aa6.88□□□□□ -1.31
EDC3-206ENST00000563009 ADM2Q7Z4H4 148 aa6.88□□□□□ -1.31
EDC3-206ENST00000563009 CRIPTQ9P021 101 aa6.88□□□□□ -1.31
EDC3-206ENST00000563009 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.86□□□□□ -1.31
EDC3-206ENST00000563009 SPTSSBQ8NFR3 76 aa6.85□□□□□ -1.31
EDC3-206ENST00000563009 CHKB-CPT1BH3BT56 60 aa6.84□□□□□ -1.31
EDC3-206ENST00000563009 SSPOA2VEC9 5147 aa6.83□□□□□ -1.32
EDC3-206ENST00000563009 KRTAP19-8Q3LI54 63 aa6.8□□□□□ -1.32
EDC3-206ENST00000563009 CCDC179H3BU77 68 aa6.79□□□□□ -1.32
EDC3-206ENST00000563009 KRTAP3-2Q9BYR7 98 aa6.79□□□□□ -1.32
EDC3-206ENST00000563009 P0C880 135 aa6.78□□□□□ -1.32
EDC3-206ENST00000563009 COA5Q86WW8 74 aa6.77□□□□□ -1.33
EDC3-206ENST00000563009 KRTAP19-6Q3LI70 58 aa6.75□□□□□ -1.33
EDC3-206ENST00000563009 MT1BP07438 61 aa6.74□□□□□ -1.33
EDC3-206ENST00000563009 Q5VV11 94 aa6.74□□□□□ -1.33
EDC3-206ENST00000563009 R4GN34 69 aa6.68□□□□□ -1.34
EDC3-206ENST00000563009 FCGBPQ9Y6R7 5405 aaPredicted RBP6.64□□□□□ -1.35
EDC3-206ENST00000563009 M0QZ58 72 aa6.63□□□□□ -1.35
EDC3-206ENST00000563009 ATP5EP56381 51 aaPredicted RBP6.63□□□□□ -1.35
EDC3-206ENST00000563009 TMEM258P61165 79 aa6.57□□□□□ -1.36
EDC3-206ENST00000563009 KRTAP10-5P60370 271 aa6.53□□□□□ -1.36
EDC3-206ENST00000563009 A6NN06 94 aa6.52□□□□□ -1.37
EDC3-206ENST00000563009 SEC61GP60059 68 aa6.51□□□□□ -1.37
EDC3-206ENST00000563009 LINC01554Q52M75 96 aa6.5□□□□□ -1.37
EDC3-206ENST00000563009 PLAC4Q8WY50 150 aa6.49□□□□□ -1.37
EDC3-206ENST00000563009 SERP1Q9Y6X1 66 aa6.49□□□□□ -1.37
EDC3-206ENST00000563009 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.37
EDC3-206ENST00000563009 KRTAP13-4Q3LI77 160 aa6.46□□□□□ -1.38
EDC3-206ENST00000563009 SYNE2Q8WXH0 6885 aaKnown RBP6.43□□□□□ -1.38
EDC3-206ENST00000563009 A0A1B0GU69 56 aa6.4□□□□□ -1.38
EDC3-206ENST00000563009 MT1XP80297 61 aa6.4□□□□□ -1.38
EDC3-206ENST00000563009 A0A1B0GU33 70 aa6.39□□□□□ -1.39
EDC3-206ENST00000563009 PRO2289Q9P1D8 64 aa6.38□□□□□ -1.39
EDC3-206ENST00000563009 LINC01558Q9Y6Z2 57 aa6.34□□□□□ -1.39
EDC3-206ENST00000563009 SPATA8Q6RVD6 105 aa6.32□□□□□ -1.4
EDC3-206ENST00000563009 PCP4P48539 62 aa6.31□□□□□ -1.4
EDC3-206ENST00000563009 PRR15LQ9BU68 103 aa6.3□□□□□ -1.4
EDC3-206ENST00000563009 SVIPQ8NHG7 77 aa6.27□□□□□ -1.41
EDC3-206ENST00000563009 A0A0D9SG42 100 aa6.26□□□□□ -1.41
EDC3-206ENST00000563009 KRTAP6-3Q3LI67 103 aa6.24□□□□□ -1.41
EDC3-206ENST00000563009 SMIM26A0A096LP01 95 aa6.2□□□□□ -1.42
EDC3-206ENST00000563009 KRTAP12-2P59991 146 aa6.2□□□□□ -1.42
EDC3-206ENST00000563009 KRTAP12-1P59990 96 aa6.18□□□□□ -1.42
EDC3-206ENST00000563009 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
EDC3-206ENST00000563009 A8MU10 97 aa6.15□□□□□ -1.42
EDC3-206ENST00000563009 SPINT4Q6UDR6 99 aa6.15□□□□□ -1.42
EDC3-206ENST00000563009 V9GYY9 64 aa6.15□□□□□ -1.42
EDC3-206ENST00000563009 Q1T7F1 81 aa6.13□□□□□ -1.43
EDC3-206ENST00000563009 UQCR11O14957 56 aa6.11□□□□□ -1.43
EDC3-206ENST00000563009 KRTAP10-7P60409 375 aaPredicted RBP6.1□□□□□ -1.43
EDC3-206ENST00000563009 RPS28P62857 69 aaKnown RBP6.1□□□□□ -1.43
EDC3-206ENST00000563009 KRTAP10-12P60413 245 aa6.09□□□□□ -1.43
EDC3-206ENST00000563009 NEBP20929 6669 aa6.08□□□□□ -1.44
EDC3-206ENST00000563009 KRTAP5-9P26371 169 aa6.06□□□□□ -1.44
EDC3-206ENST00000563009 KMT2DO14686 5537 aa6.05□□□□□ -1.44
EDC3-206ENST00000563009 PSPHP1O15172 72 aa6.05□□□□□ -1.44
EDC3-206ENST00000563009 MUC12Q9UKN1 5478 aa6.03□□□□□ -1.44
EDC3-206ENST00000563009 KRTAP4-8A0A0G2JLE6 195 aa6.01□□□□□ -1.45
EDC3-206ENST00000563009 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
EDC3-206ENST00000563009 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
EDC3-206ENST00000563009 MIR22HGQ0VDD5 57 aa5.99□□□□□ -1.45
EDC3-206ENST00000563009 KRTAP20-1Q3LI63 56 aa5.96□□□□□ -1.46
EDC3-206ENST00000563009 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
EDC3-206ENST00000563009 C10orf95Q9H7T3 257 aa5.88□□□□□ -1.47
EDC3-206ENST00000563009 A6NED7 52 aa5.86□□□□□ -1.47
EDC3-206ENST00000563009 K7ERS5 55 aa5.81□□□□□ -1.48
EDC3-206ENST00000563009 TNP1P09430 55 aa5.79□□□□□ -1.48
EDC3-206ENST00000563009 MDN1Q9NU22 5596 aa5.79□□□□□ -1.48
EDC3-206ENST00000563009 SPRR2EP22531 72 aa5.76□□□□□ -1.49
EDC3-206ENST00000563009 SPRR2BP35325 72 aa5.76□□□□□ -1.49
EDC3-206ENST00000563009 SPRR2AP35326 72 aa5.76□□□□□ -1.49
EDC3-206ENST00000563009 LCE1AQ5T7P2 110 aa5.75□□□□□ -1.49
EDC3-206ENST00000563009 KRTAP19-7Q3SYF9 63 aa5.72□□□□□ -1.49
EDC3-206ENST00000563009 KRTAP2-3P0C7H8 128 aa5.68□□□□□ -1.5
EDC3-206ENST00000563009 KRTAP2-4Q9BYR9 128 aa5.68□□□□□ -1.5
EDC3-206ENST00000563009 CDC42SE1Q9NRR8 79 aa5.68□□□□□ -1.5
EDC3-206ENST00000563009 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
EDC3-206ENST00000563009 MT1EP04732 61 aa5.65□□□□□ -1.5
EDC3-206ENST00000563009 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
EDC3-206ENST00000563009 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
EDC3-206ENST00000563009 SPRR2DP22532 72 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms