RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 KIAA1109Q2LD37 5005 aa2.79□□□□□ -1.96
CHD9-205ENST00000562785 SRRM2Q9UQ35 2752 aaKnown RBP2.78□□□□□ -1.96
CHD9-205ENST00000562785 WFDC13Q8IUB5 93 aa2.78□□□□□ -1.96
CHD9-205ENST00000562785 SERP2Q8N6R1 65 aa2.78□□□□□ -1.96
CHD9-205ENST00000562785 TRAV7A0A075B6U4 112 aa2.77□□□□□ -1.97
CHD9-205ENST00000562785 MT1HL1P0DM35 61 aa2.77□□□□□ -1.97
CHD9-205ENST00000562785 LINC00313P59037 77 aa2.77□□□□□ -1.97
CHD9-205ENST00000562785 MRPL34Q9BQ48 92 aaKnown RBP2.77□□□□□ -1.97
CHD9-205ENST00000562785 VPS13BQ7Z7G8 4022 aa2.77□□□□□ -1.97
CHD9-205ENST00000562785 UQCRQO14949 82 aa2.76□□□□□ -1.97
CHD9-205ENST00000562785 BIRC6Q9NR09 4857 aa2.76□□□□□ -1.97
CHD9-205ENST00000562785 HSPG2P98160 4391 aa2.75□□□□□ -1.97
CHD9-205ENST00000562785 TRAV22A0A0B4J277 110 aa2.75□□□□□ -1.97
CHD9-205ENST00000562785 H3BPC8 53 aa2.75□□□□□ -1.97
CHD9-205ENST00000562785 COX7CP15954 63 aa2.75□□□□□ -1.97
CHD9-205ENST00000562785 MP68P56378 58 aa2.75□□□□□ -1.97
CHD9-205ENST00000562785 RETNLBQ9BQ08 111 aa2.74□□□□□ -1.97
CHD9-205ENST00000562785 PKHD1L1Q86WI1 4243 aa2.73□□□□□ -1.97
CHD9-205ENST00000562785 H0Y9P7 68 aa2.72□□□□□ -1.97
CHD9-205ENST00000562785 NDUFC1O43677 76 aa2.72□□□□□ -1.97
CHD9-205ENST00000562785 KLKP1Q107X0 134 aa2.72□□□□□ -1.97
CHD9-205ENST00000562785 FAT1Q14517 4588 aa2.72□□□□□ -1.97
CHD9-205ENST00000562785 TPRXLQ17RH7 258 aa2.72□□□□□ -1.97
CHD9-205ENST00000562785 ADM2Q7Z4H4 148 aa2.72□□□□□ -1.97
CHD9-205ENST00000562785 LOC101927531A0A1B0GV80 90 aa2.71□□□□□ -1.98
CHD9-205ENST00000562785 C9orf92A6NGG3 77 aa2.71□□□□□ -1.98
CHD9-205ENST00000562785 C20orf197Q8N268 126 aa2.71□□□□□ -1.98
CHD9-205ENST00000562785 C20orf166-AS1Q96NR2 134 aa2.71□□□□□ -1.98
CHD9-205ENST00000562785 HERC2O95714 4834 aa2.7□□□□□ -1.98
CHD9-205ENST00000562785 RBM12B-AS1Q9P1G2 102 aa2.7□□□□□ -1.98
CHD9-205ENST00000562785 R4GN34 69 aa2.7□□□□□ -1.98
CHD9-205ENST00000562785 FLG2Q5D862 2391 aaPredicted RBP2.69□□□□□ -1.98
CHD9-205ENST00000562785 HRES1P13985 223 aa2.69□□□□□ -1.98
CHD9-205ENST00000562785 ATP5EP56381 51 aaPredicted RBP2.69□□□□□ -1.98
CHD9-205ENST00000562785 ZCCHC13Q8WW36 166 aaKnown RBP2.69□□□□□ -1.98
CHD9-205ENST00000562785 CCDC179H3BU77 68 aa2.68□□□□□ -1.98
CHD9-205ENST00000562785 P0C880 135 aa2.68□□□□□ -1.98
CHD9-205ENST00000562785 TMEM258P61165 79 aa2.68□□□□□ -1.98
CHD9-205ENST00000562785 RPL37P61927 97 aaKnown RBP2.68□□□□□ -1.98
CHD9-205ENST00000562785 ATP11AUNQ6ZP68 121 aa2.68□□□□□ -1.98
CHD9-205ENST00000562785 LINC00208Q96KT6 92 aa2.68□□□□□ -1.98
CHD9-205ENST00000562785 ABCA13Q86UQ4 5058 aa2.67□□□□□ -1.98
CHD9-205ENST00000562785 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
CHD9-205ENST00000562785 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
CHD9-205ENST00000562785 C7orf65Q6ZTY9 151 aa2.67□□□□□ -1.98
CHD9-205ENST00000562785 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
CHD9-205ENST00000562785 SNURFQ9Y675 71 aa2.66□□□□□ -1.98
CHD9-205ENST00000562785 MYCBP2O75592 4640 aa2.65□□□□□ -1.98
CHD9-205ENST00000562785 FAT3Q8TDW7 4589 aa2.65□□□□□ -1.99
CHD9-205ENST00000562785 FAM236DA0A1B0GTK5 79 aa2.64□□□□□ -1.99
CHD9-205ENST00000562785 H7BZZ5 65 aa2.64□□□□□ -1.99
CHD9-205ENST00000562785 FAM236CP0DP71 79 aa2.64□□□□□ -1.99
CHD9-205ENST00000562785 LRP1Q07954 4544 aaKnown RBP2.64□□□□□ -1.99
CHD9-205ENST00000562785 TNXBP22105 4242 aa2.63□□□□□ -1.99
CHD9-205ENST00000562785 K7ERS5 55 aa2.63□□□□□ -1.99
CHD9-205ENST00000562785 CYP4F30PQ9H0H9 118 aa2.63□□□□□ -1.99
CHD9-205ENST00000562785 PCLOQ9Y6V0 5065 aa2.62□□□□□ -1.99
CHD9-205ENST00000562785 DMBT1Q9UGM3 2413 aaPredicted RBP2.61□□□□□ -1.99
CHD9-205ENST00000562785 A8MUN3 132 aa2.61□□□□□ -1.99
CHD9-205ENST00000562785 KRTAP25-1Q3LHN0 102 aa2.61□□□□□ -1.99
CHD9-205ENST00000562785 PCOTHQ58A44 107 aa2.61□□□□□ -1.99
CHD9-205ENST00000562785 CYSTM1Q9H1C7 97 aa2.61□□□□□ -1.99
CHD9-205ENST00000562785 SPINK7P58062 85 aa2.6□□□□□ -1.99
CHD9-205ENST00000562785 DMAC1Q96GE9 116 aa2.59□□□□□ -1.99
CHD9-205ENST00000562785 SERP1Q9Y6X1 66 aa2.57□□□□□ -2
CHD9-205ENST00000562785 ACYP2P14621 99 aa2.56□□□□□ -2
CHD9-205ENST00000562785 CHKB-CPT1BH3BT56 60 aa2.55□□□□□ -2
CHD9-205ENST00000562785 COX6B2Q6YFQ2 88 aa2.55□□□□□ -2
CHD9-205ENST00000562785 SPTSSBQ8NFR3 76 aa2.55□□□□□ -2
CHD9-205ENST00000562785 RPS28P62857 69 aaKnown RBP2.54□□□□□ -2
CHD9-205ENST00000562785 C4orf26Q17RF5 130 aa2.54□□□□□ -2
CHD9-205ENST00000562785 COA5Q86WW8 74 aa2.54□□□□□ -2
CHD9-205ENST00000562785 A0A1B0GU33 70 aa2.53□□□□□ -2
CHD9-205ENST00000562785 A6NED7 52 aa2.52□□□□□ -2.01
CHD9-205ENST00000562785 H1FX-AS1Q4G0G2 97 aa2.5□□□□□ -2.01
CHD9-205ENST00000562785 HMCN2Q8NDA2 5059 aa2.5□□□□□ -2.01
CHD9-205ENST00000562785 S4R3F8 94 aa2.49□□□□□ -2.01
CHD9-205ENST00000562785 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
CHD9-205ENST00000562785 PRR15LQ9BU68 103 aa2.47□□□□□ -2.01
CHD9-205ENST00000562785 Q1T7F1 81 aa2.45□□□□□ -2.02
CHD9-205ENST00000562785 HERC1Q15751 4861 aa2.45□□□□□ -2.02
CHD9-205ENST00000562785 LPAP08519 4548 aa2.44□□□□□ -2.02
CHD9-205ENST00000562785 LCA10Q71F78 164 aa2.44□□□□□ -2.02
CHD9-205ENST00000562785 KRTAP4-1Q9BYQ7 146 aa2.44□□□□□ -2.02
CHD9-205ENST00000562785 LRP2P98164 4655 aa2.43□□□□□ -2.02
CHD9-205ENST00000562785 A0A1B0GU69 56 aa2.43□□□□□ -2.02
CHD9-205ENST00000562785 CSAG1Q6PB30 78 aa2.43□□□□□ -2.02
CHD9-205ENST00000562785 LINC01558Q9Y6Z2 57 aa2.43□□□□□ -2.02
CHD9-205ENST00000562785 MUC17Q685J3 4493 aa2.42□□□□□ -2.02
CHD9-205ENST00000562785 UBR4Q5T4S7 5183 aa2.41□□□□□ -2.02
CHD9-205ENST00000562785 H0YAA0 97 aa2.41□□□□□ -2.02
CHD9-205ENST00000562785 KRTAP19-2Q3LHN2 52 aa2.39□□□□□ -2.03
CHD9-205ENST00000562785 KRTAP12-3P60328 96 aa2.38□□□□□ -2.03
CHD9-205ENST00000562785 M0R2T5 61 aa2.37□□□□□ -2.03
CHD9-205ENST00000562785 UQCR11O14957 56 aa2.35□□□□□ -2.03
CHD9-205ENST00000562785 Q5VV11 94 aa2.35□□□□□ -2.03
CHD9-205ENST00000562785 RNF213Q63HN8 5207 aa2.34□□□□□ -2.03
CHD9-205ENST00000562785 MT1HP80294 61 aa2.34□□□□□ -2.03
CHD9-205ENST00000562785 CRIPTQ9P021 101 aa2.33□□□□□ -2.04
CHD9-205ENST00000562785 MUC2Q02817 5179 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms